prot_M-pyrifera_M_contig70116.16767.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70116.16767.1
Unique Nameprot_M-pyrifera_M_contig70116.16767.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length144
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig70116.16767.1 vs. uniprot
Match: F2U7Y8_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7Y8_SALR5)

HSP 1 Score: 73.2 bits (178), Expect = 2.580e-12
Identity = 52/143 (36.36%), Postives = 72/143 (50.35%), Query Frame = 0 
Query:    8 PPGEGIVRLFHGTTAASATNIIEHGVNLDLCHEHCDFGRAFYTTEQFSFALFCAFTAYVGSGMPRNVSSAPAVLVFDIPAGEL---DAIAVDLEGELWKKAVSGFRRGGLRE-KLG--DSYRRVVAAEALRGPLCNNATLTES 144
            P GE  VRLFHGTT A+AT I++ G+      + CDFG+AF TT  F +A+  A+   V S          A+LVFD+   +L     +    +   WK  +   RR  LR+ K G    + R   AE + G +C NAT  E+
Sbjct:  532 PKGETTVRLFHGTTRAAATAILQDGIEAARLGDACDFGKAFCTTTSFPYAVQYAYDRAVASS---RADDDMAILVFDLRTDKLPRGSKLLTLRDSTDWKLLLEHCRRCKLRQLKKGYPGLHTRYSNAELVIGNICGNATQIET 671
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70116.16767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
F2U7Y8_SALR52.580e-1236.36Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.228.10coord: 7..83
e-value: 6.8E-6
score: 27.7
NoneNo IPR availableSUPERFAMILY56399ADP-ribosylationcoord: 13..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70116contigM-pyrifera_M_contig70116:331..762 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70116.16767.1mRNA_M-pyrifera_M_contig70116.16767.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70116 331..762 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70116.16767.1 ID=prot_M-pyrifera_M_contig70116.16767.1|Name=mRNA_M-pyrifera_M_contig70116.16767.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp
MRDDVLSPPGEGIVRLFHGTTAASATNIIEHGVNLDLCHEHCDFGRAFYT
TEQFSFALFCAFTAYVGSGMPRNVSSAPAVLVFDIPAGELDAIAVDLEGE
LWKKAVSGFRRGGLREKLGDSYRRVVAAEALRGPLCNNATLTES
back to top