prot_M-pyrifera_M_contig70014.16757.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70014.16757.1
Unique Nameprot_M-pyrifera_M_contig70014.16757.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length242
Homology
BLAST of mRNA_M-pyrifera_M_contig70014.16757.1 vs. uniprot
Match: C1EDY5_MICCC (Gamma-tubulin complex component (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EDY5_MICCC)

HSP 1 Score: 89.0 bits (219), Expect = 1.420e-16
Identity = 89/271 (32.84%), Postives = 119/271 (43.91%), Query Frame = 0
Query:    1 EQRLVEDVLVVAQGFGGRYVDFSGPGGGVRVRPGAPGSAVQLGLCLRVGEVGWVARRVRSWVEKEKAAGL------CKSALVAAAEEELGALAR--------------------TCGALGARSKGD--LSLRALSAWLCGASLSRTRALAQAVESVGHLHGGALSGALWTRGTATGDTAARALLLKLARRTAAPLFAMARRWVLAGEIVDDFGEFWV-HESEEGTEGGGREKGVVGSAVCPAFLGGGVAAAIAGAGAAVRALRVQCHDEAW 242
            EQ LV DVL   QG  GR++ ++       V P AP       L  ++ E+GW+ RRVR+ +     AGL       + A  AA + EL    R                    T G  G  + G   L+LR LS WL    L R R LA  V++     GGAL  AL       GD A RA + +L    A P   M R WV+AGE+ D  GEF+V  +   G E   R +  +   + P F+    AA +   G ++  LR +C DE W
Sbjct:  156 EQELVRDVLFACQGIDGRHIRYNPQMASYVVDPAAPVRPGARDLARKLTELGWLFRRVRAALGGVDEAGLGGDGGSVRQAFRAAVQAELADYYRLIAVLEAQAQVPMASALEAPTTGTGGGTAGGGTYLTLRRLSVWLAE-PLRRLRLLAVLVDAAADARGGALLRALHEHAK-HGDPATRATVERLLAAAAEPALRMVRAWVVAGELEDPRGEFFVASDPAVGEEDLWRSRYFINDEMRPPFISEATAADVLRVGKSINFLRRRCDDENW 424          
BLAST of mRNA_M-pyrifera_M_contig70014.16757.1 vs. uniprot
Match: A0A1Y2HE04_9FUNG (Spindle pole body component n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HE04_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 1.690e-6
Identity = 66/256 (25.78%), Postives = 111/256 (43.36%), Query Frame = 0
Query:    4 LVEDVLVVAQGFGGRYVDFSGPGGGVRVRPGAPGSAVQLGLCLRVGEVGWVARRVRSWVEKEKAA---------------GLCKSALVAAAEEELGALARTCGAL-GARSKGDLSLRALSAWLCGASLSRTRALAQAVESVGHLHGGALSGALWTRGTATGDTAARALLLKLARRTAAPLFAMARRWVLAGEIVDDFGEFWVHESEEGTEGGG-REKGVVGSAVCPAFLGGGVAAAIAGAGAAVRALRVQCHDEAW 242
            +++D+L V QG  GR + +        + P          L  R+GE+G++ + +  ++   + A               GL + +  +A   E+    R    L  + ++GDL+LR L  W    +  R R +   + S   + GGA+   + T     GD    A +  + +   APLFAM RRWV  G++VD  GEF+V  +    E    + K  +   + P F+   +A  I   G ++  LR +  D AW
Sbjct:  248 IIKDLLFVLQGIDGRLMKWDPNLSEFVLDPNVGIPRPTRDLIRRIGELGYLYKSIADYLTTTRLATGGTSQPTAPGGSTIGLVEQSFASALSTEIAHYFRLLAVLESSTARGDLTLRRLWLWTSEPA-QRLRVIYAMINSSRGVQGGAMLSMVHTYAH-HGDPGLEAFVQHVLKAMCAPLFAMIRRWVYEGDLVDPHGEFFVKVAGNVDEDEWWKAKYTLQQDMIPGFIDKLLARKILLIGKSLNFLRFRAKDHAW 501          
BLAST of mRNA_M-pyrifera_M_contig70014.16757.1 vs. uniprot
Match: A0A7R9JTI5_TIMGE (Gamma-tubulin complex component n=2 Tax=Timema TaxID=61471 RepID=A0A7R9JTI5_TIMGE)

HSP 1 Score: 57.0 bits (136), Expect = 9.370e-6
Identity = 67/263 (25.48%), Postives = 114/263 (43.35%), Query Frame = 0
Query:    1 EQRLVEDVLVVAQGFGGRYVDFSGPGGGVRVRPGAPGSAVQLGLCLRVGEVGWVARRVRSWVEKE---KAAGLCKSALVAAAEEELGALARTCGAL-----------------GARSKGDLSLRALSAWLCGASLSRTRALAQAVESVGHLHGGALSGALWTRGTATGDTAARALLLKLARRTAAPLFAMARRWVLAGEIVDDFGEFWVHESEEGTEGG--GREKGVVGSAVCPAFLGGGVAAAIAGAGAAVRALRVQCHDEA 241
            E  L+++++   QG  G+ +  +    G ++ P            +R+ E+GW+  +V+   +     ++ GL   +LV A   EL   +R    L                  +R    L+LR L  W     ++R + L   +E+     GGAL+  + +     GD   +  + +L      PL AM  RW+LAGE+ D +GEF++  + E  +G     EK  V  A+ P+F+    A  I   G ++  LR  C D+A
Sbjct:   23 ESTLLQELIYCFQGINGKILKMNYASQGFQIDPKVQLKRPVHCQVMRLAELGWLCAQVQQHCQPAGVIRSTGLIGQSLVVALRGELTEYSRLVATLQSQVPVPVQPHNELEPLASRRSTGLTLRQLVVWSLD-PMARLKCLVAVMEACRDKKGGALASCIHSF-LQHGDPFVKDTVKQLLAAVCKPLHAMLSRWILAGELDDAYGEFFIAANLE-IKGNLLWHEKYRVLDAMVPSFISMAQAKKILATGKSINFLREVCLDQA 282          
BLAST of mRNA_M-pyrifera_M_contig70014.16757.1 vs. uniprot
Match: A0A1X2HSV2_SYNRA (Spindle pole body component n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HSV2_SYNRA)

HSP 1 Score: 53.9 bits (128), Expect = 9.900e-5
Identity = 63/255 (24.71%), Postives = 111/255 (43.53%), Query Frame = 0
Query:    1 EQRLVEDVLVVAQGFGGRYVDFSGPGGGVRVRPGAPGSAVQ--LGLCLRVGEVGWVARRVRSWVE---KEKAAGLCKSALVAAAEEELGALARTCGAL---------GARSKGDLSLRALSAWLCGASLSRTRALAQAVESVGHLHGGALSGALWTRGTATGDTAARALLLKLARRTAAPLFAMARRWVLAGEIVDDFGEFWVH-ESEEGTEGGGREKGVVGSAVCPAFLGGGVAAAIAGAGAAVRALRVQCHDE 240
            E  L+ D++ V QG  G+++     G    V   + G   Q      LR+ E+GW+ RRV+++V     + + GL   A   A + EL    +    L          + ++  L+L+ L  W    S  R R ++  V++     GG L   +    T  GD   +  +  +    + P + M +RWV  GE+ D +GEF+V  +     E   + K  +   + P+++   +A  I   G ++  +R  CHD+
Sbjct:   54 ESALLRDLIFVFQGIDGQHIKLD-CGTNEYVLDASRGHVSQPTKDFVLRLAELGWLYRRVQTFVHARYNDPSVGLVGQAFCFALQRELTDYYKFIAILEGQIEKQTTASTTEQTLTLKRLLVWTRD-SFQRLRLMSVLVDACQDQKGGTLVSTMHNY-TKHGDPFIQQFIKDMLEEVSKPFYEMLQRWVYEGELDDPYGEFFVACDPMVSEEELWQSKYSIRKDMIPSYISNELAQKIFSIGKSLNFIRYSCHDD 305          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70014.16757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
C1EDY5_MICCC1.420e-1632.84Gamma-tubulin complex component (Fragment) n=1 Tax... [more]
A0A1Y2HE04_9FUNG1.690e-625.78Spindle pole body component n=1 Tax=Catenaria angu... [more]
A0A7R9JTI5_TIMGE9.370e-625.48Gamma-tubulin complex component n=2 Tax=Timema Tax... [more]
A0A1X2HSV2_SYNRA9.900e-524.71Spindle pole body component n=1 Tax=Syncephalastru... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041470Gamma tubulin complex component protein, N-terminalPFAMPF17681GCP_N_terminalcoord: 5..242
e-value: 9.6E-29
score: 101.0
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 1..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70014contigM-pyrifera_M_contig70014:50..904 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70014.16757.1mRNA_M-pyrifera_M_contig70014.16757.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70014 50..904 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70014.16757.1 ID=prot_M-pyrifera_M_contig70014.16757.1|Name=mRNA_M-pyrifera_M_contig70014.16757.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp
EQRLVEDVLVVAQGFGGRYVDFSGPGGGVRVRPGAPGSAVQLGLCLRVGE
VGWVARRVRSWVEKEKAAGLCKSALVAAAEEELGALARTCGALGARSKGD
LSLRALSAWLCGASLSRTRALAQAVESVGHLHGGALSGALWTRGTATGDT
AARALLLKLARRTAAPLFAMARRWVLAGEIVDDFGEFWVHESEEGTEGGG
REKGVVGSAVCPAFLGGGVAAAIAGAGAAVRALRVQCHDEAW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041470GCP_N
IPR007259GCP