prot_M-pyrifera_M_contig68697.16516.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig68697.16516.1
Unique Nameprot_M-pyrifera_M_contig68697.16516.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length382
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68697.16516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 173..206
e-value: 160.0
score: 4.4
coord: 242..275
e-value: 1.3
score: 18.1
coord: 276..309
e-value: 200.0
score: 3.6
coord: 106..139
e-value: 4.3E-5
score: 32.9
coord: 208..241
e-value: 180.0
score: 3.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 173..206
score: 6.107
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 36..69
score: 5.251
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 242..275
score: 7.11
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 106..139
score: 11.594
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 208..241
score: 6.284
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 169..369
e-value: 5.6E-20
score: 73.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..168
e-value: 1.3E-16
score: 62.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 11..312
IPR013105Tetratricopeptide repeat 2PFAMPF07719TPR_2coord: 108..139
e-value: 1.5E-5
score: 24.7
NoneNo IPR availablePANTHERPTHR44943FAMILY NOT NAMEDcoord: 16..222
NoneNo IPR availablePANTHERPTHR44943:SF7CELLULOSE SYNTHASE OPERON PROTEIN Ccoord: 71..362
NoneNo IPR availablePANTHERPTHR44943FAMILY NOT NAMEDcoord: 71..362
NoneNo IPR availablePANTHERPTHR44943:SF7CELLULOSE SYNTHASE OPERON PROTEIN Ccoord: 16..222
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 2..309
score: 21.792

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68697contigM-pyrifera_M_contig68697:5..1150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68697.16516.1mRNA_M-pyrifera_M_contig68697.16516.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig68697 5..1150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig68697.16516.1 ID=prot_M-pyrifera_M_contig68697.16516.1|Name=mRNA_M-pyrifera_M_contig68697.16516.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=382bp
LQQAQLGKSKALCALNKKREAQKILRNYCKNYPQDGEGLSLYSHLLFDVG
NYKDALRKILKAIELKYVLSASRLFKVEILLKANNMSAAKEELSDLFAVK
EISESSQFFYLQGNYYEQNNEFEKAKSAYEKGLEIEPRNVAMRWRLATLC
YSKQSYKDCLQILNNINKVERDDKFYELRAKAHFAQEMHEKANEDFSKFI
NLDEAVEDELLYMYAACLDTLDNTEMALLIINQLLNVDPSHFKALLMRVS
LLTKLGKYSEVLDSCDQALKQKPENLVAISSKISAYIILENYEQAAELCN
KFFAKNEKSIDNIKVIRLFALIEYHQSNFKLAIDNFLLLEQFSVSISADY
EKCSESYYNLGMYEKALLTSVKIENSKTKEDM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013105TPR_2
IPR013026TPR-contain_dom