prot_M-pyrifera_M_contig66421.16112.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig66421.16112.1
Unique Nameprot_M-pyrifera_M_contig66421.16112.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length86
Homology
BLAST of mRNA_M-pyrifera_M_contig66421.16112.1 vs. uniprot
Match: A0A6H5KSG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG1_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 3.420e-16
Identity = 38/42 (90.48%), Postives = 41/42 (97.62%), Query Frame = 0
Query:   15 KGHSATVHHAEFSPDGSLVASASRDRTVRLWSPSARGGSTVL 56
            KGHSATVHHAEFSP GSLVASAS+DRTVRLW+PSARGGS+VL
Sbjct:    8 KGHSATVHHAEFSPKGSLVASASKDRTVRLWTPSARGGSSVL 49          
BLAST of mRNA_M-pyrifera_M_contig66421.16112.1 vs. uniprot
Match: A0A7L3WV41_9GRUI (POC1B protein (Fragment) n=1 Tax=Atlantisia rogersi TaxID=2478892 RepID=A0A7L3WV41_9GRUI)

HSP 1 Score: 65.1 bits (157), Expect = 1.200e-10
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    6 WP---GLKALRFKGHSATVHHAEFSPDGSLVASASRDRTVRLWSPSARGGSTVL 56
            WP   G +A RF GH+A V   +FSPDG L+ASAS+DRTVRLW P   G S+VL
Sbjct:   12 WPLKAGSRAYRFVGHAAAVTGVQFSPDGQLLASASQDRTVRLWIPCIHGESSVL 65          
BLAST of mRNA_M-pyrifera_M_contig66421.16112.1 vs. uniprot
Match: A0A060YW16_ONCMY (Uncharacterized protein n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A060YW16_ONCMY)

HSP 1 Score: 60.8 bits (146), Expect = 1.910e-9
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    9 LKALRFKGHSATVHHAEFSPDGSLVASASRDRTVRLWSPSARGGST 54
            ++A RF GH   V   +FSP G LVASASRD+TVRLW PS +G ST
Sbjct:    1 MRAYRFVGHKDVVTSVQFSPSGHLVASASRDKTVRLWVPSVKGEST 46          
BLAST of mRNA_M-pyrifera_M_contig66421.16112.1 vs. uniprot
Match: A0A8J4UC92_CLAMG (POC1 centriolar protein B (Fragment) n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4UC92_CLAMG)

HSP 1 Score: 62.4 bits (150), Expect = 1.920e-9
Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    7 PGLKALRFKGHSATVHHAEFSPDGSLVASASRDRTVRLWSPSARGGSTVL 56
            P  +A RF GH   V    FSP G L+AS SRDRTVRLW+PS +G STVL
Sbjct:    7 PKSRAFRFIGHQDIVTAVHFSPSGELLASGSRDRTVRLWTPSIKGESTVL 56          
BLAST of mRNA_M-pyrifera_M_contig66421.16112.1 vs. uniprot
Match: A0A7M4E3B9_CROPO (POC1 centriolar protein B n=8 Tax=Crocodylia TaxID=1294634 RepID=A0A7M4E3B9_CROPO)

HSP 1 Score: 62.4 bits (150), Expect = 1.950e-9
Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    1 MFEKNWPGLKALRFKGHSATVHHAEFSPDGSLVASASRDRTVRLWSPSARGGSTVL 56
            M  K  P  +A RF GH   V+  +FSPDG L+ASAS+DRTVRLW P   G S+VL
Sbjct:    1 MIWKLKPQSRAFRFVGHVEAVNSVQFSPDGQLLASASQDRTVRLWVPCIHGESSVL 56          
BLAST of mRNA_M-pyrifera_M_contig66421.16112.1 vs. uniprot
Match: A0A8B9ZCG0_9AVES (POC1 centriolar protein A n=1 Tax=Buteo japonicus TaxID=224669 RepID=A0A8B9ZCG0_9AVES)

HSP 1 Score: 62.0 bits (149), Expect = 2.110e-9
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    7 PGLKALRFKGHSATVHHAEFSPDGSLVASASRDRTVRLWSPSARGGSTV 55
            P ++A RF GH   V   +FSP G LVAS SRD+TVRLW PS +G STV
Sbjct:   12 PQMRAYRFVGHKDAVMCVQFSPSGHLVASGSRDKTVRLWVPSVKGESTV 60          
BLAST of mRNA_M-pyrifera_M_contig66421.16112.1 vs. uniprot
Match: UPI0003C4A687 (POC1 centriolar protein homolog A isoform X1 n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=UPI0003C4A687)

HSP 1 Score: 62.0 bits (149), Expect = 2.520e-9
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    7 PGLKALRFKGHSATVHHAEFSPDGSLVASASRDRTVRLWSPSARGGSTV 55
            P ++A RF GH   V   +FSP G LVAS SRD+TVRLW PS +G STV
Sbjct:   12 PQMRAYRFVGHKDAVMCVQFSPSGHLVASGSRDKTVRLWVPSVKGESTV 60          
BLAST of mRNA_M-pyrifera_M_contig66421.16112.1 vs. uniprot
Match: A0A2I0LSN3_COLLI (POC1 centriolar protein A n=4 Tax=Columbidae TaxID=8930 RepID=A0A2I0LSN3_COLLI)

HSP 1 Score: 62.0 bits (149), Expect = 2.540e-9
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    7 PGLKALRFKGHSATVHHAEFSPDGSLVASASRDRTVRLWSPSARGGSTV 55
            P ++A RF GH   V   +FSP G LVAS SRD+TVRLW PS +G STV
Sbjct:   12 PQMRAYRFVGHKDAVMCVQFSPSGHLVASGSRDKTVRLWIPSVKGESTV 60          
BLAST of mRNA_M-pyrifera_M_contig66421.16112.1 vs. uniprot
Match: A0A663MGZ0_ATHCN (POC1 centriolar protein A n=10 Tax=Neognathae TaxID=8825 RepID=A0A663MGZ0_ATHCN)

HSP 1 Score: 62.0 bits (149), Expect = 2.540e-9
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    7 PGLKALRFKGHSATVHHAEFSPDGSLVASASRDRTVRLWSPSARGGSTV 55
            P ++A RF GH   V   +FSP G LVAS SRD+TVRLW PS +G STV
Sbjct:   12 PQMRAYRFVGHKDAVMCVQFSPSGHLVASGSRDKTVRLWVPSVKGESTV 60          
BLAST of mRNA_M-pyrifera_M_contig66421.16112.1 vs. uniprot
Match: UPI000907073D (POC1 centriolar protein homolog B isoform X3 n=2 Tax=Crocodylia TaxID=1294634 RepID=UPI000907073D)

HSP 1 Score: 62.0 bits (149), Expect = 2.580e-9
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    7 PGLKALRFKGHSATVHHAEFSPDGSLVASASRDRTVRLWSPSARGGSTVL 56
            P  +A RF GH   V+  +FSPDG L+ASAS+DRTVRLW P   G S+VL
Sbjct:    7 PQSRAFRFVGHVEAVNSVQFSPDGQLLASASQDRTVRLWVPCIHGESSVL 56          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66421.16112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSG1_9PHAE3.420e-1690.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7L3WV41_9GRUI1.200e-1059.26POC1B protein (Fragment) n=1 Tax=Atlantisia rogers... [more]
A0A060YW16_ONCMY1.910e-960.87Uncharacterized protein n=1 Tax=Oncorhynchus mykis... [more]
A0A8J4UC92_CLAMG1.920e-960.00POC1 centriolar protein B (Fragment) n=1 Tax=Clari... [more]
A0A7M4E3B9_CROPO1.950e-955.36POC1 centriolar protein B n=8 Tax=Crocodylia TaxID... [more]
A0A8B9ZCG0_9AVES2.110e-959.18POC1 centriolar protein A n=1 Tax=Buteo japonicus ... [more]
UPI0003C4A6872.520e-959.18POC1 centriolar protein homolog A isoform X1 n=1 T... [more]
A0A2I0LSN3_COLLI2.540e-959.18POC1 centriolar protein A n=4 Tax=Columbidae TaxID... [more]
A0A663MGZ0_ATHCN2.540e-959.18POC1 centriolar protein A n=10 Tax=Neognathae TaxI... [more]
UPI000907073D2.580e-958.00POC1 centriolar protein homolog B isoform X3 n=2 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 7..46
e-value: 2.0E-8
score: 44.0
coord: 49..86
e-value: 2.3
score: 14.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 54..86
e-value: 5.3E-6
score: 27.1
coord: 14..46
e-value: 5.8E-9
score: 36.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 56..86
score: 12.179
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 14..46
score: 15.421
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 9..86
e-value: 1.7E-24
score: 88.6
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 7..86
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 7..86
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 14..86
score: 22.175
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 12..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66421contigM-pyrifera_M_contig66421:864..1121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66421.16112.1mRNA_M-pyrifera_M_contig66421.16112.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig66421 864..1121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig66421.16112.1 ID=prot_M-pyrifera_M_contig66421.16112.1|Name=mRNA_M-pyrifera_M_contig66421.16112.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp
MFEKNWPGLKALRFKGHSATVHHAEFSPDGSLVASASRDRTVRLWSPSAR
GGSTVLKGHMGGVRHASFSRNGRLLITASEDKTVKV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf