prot_M-pyrifera_M_contig6624.16076.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig6624.16076.1
Unique Name	prot_M-pyrifera_M_contig6624.16076.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	114

Homology

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BLAST of mRNA_M-pyrifera_M_contig6624.16076.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 2.770e-61
Identity = 91/113 (80.53%), Postives = 101/113 (89.38%), Query Frame = 0

Query:    1 MGPDYIGPAVDHFQEITAQYPEFWVFSLLGMALVEYKSITTAFAEPSPITGEGGLRDDYTPGDLGFDPLGLKPKTDEKLATMQTKELNNGRLAMIGIAGMLVQELVSPVNILG 113
            MGPDYIGPAVDHFQEI+AQ+PEFW FSLLGMA +EY +IT A+AEPSP+TGEGGLRD+Y+PGDLGFDPL LKPK    L  MQTKELNNGRLAMIGIAGMLVQELV+P +ILG
Sbjct:  109 MGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221

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BLAST of mRNA_M-pyrifera_M_contig6624.16076.1 vs. uniprot
Match: A0A6H5L7D2_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7D2_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 1.070e-59
Identity = 89/112 (79.46%), Postives = 99/112 (88.39%), Query Frame = 0

Query:    1 MGPDYIGPAVDHFQEITAQYPEFWVFSLLGMALVEYKSITTAFAEPSPITGEGGLRDDYTPGDLGFDPLGLKPKTDEKLATMQTKELNNGRLAMIGIAGMLVQELVSPVNIL 112
            MGPDYIGPAVDHFQEI+A++PEFW FSLLGM L+EY +IT A+AEPS +TGEGGLRDDY+ GDLGFDPL LKPK    L TMQTKELNNGRLAMIGIAGMLVQELV+ +NIL
Sbjct:    1 MGPDYIGPAVDHFQEISARFPEFWAFSLLGMVLIEYNTITKAYAEPSFVTGEGGLRDDYSLGDLGFDPLNLKPKDQAALETMQTKELNNGRLAMIGIAGMLVQELVNSINIL 112

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BLAST of mRNA_M-pyrifera_M_contig6624.16076.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 1.450e-58
Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 0

Query:    1 MGPDYIGPAVDHFQEITAQYPEFWVFSLLGMALVEYKSITTAFAEPSPITGEGGLRDDYTPGDLGFDPLGLKPKTDEKLATMQTKELNNGRLAMIGIAGMLVQELVSPVNILG 113
            MGPDYIGPAVDHFQEI+AQYPEFWVFSLLGMA +EY +I TAF  PS +TGEGGL++DY PGDLGFDPL LKP+ +  L  M+TKELNNGRLAMIGIAGMLVQEL++P +ILG
Sbjct:  108 MGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220

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BLAST of mRNA_M-pyrifera_M_contig6624.16076.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 6.400e-58
Identity = 87/112 (77.68%), Postives = 98/112 (87.50%), Query Frame = 0

Query:    1 MGPDYIGPAVDHFQEITAQYPEFWVFSLLGMALVEYKSITTAFAEPSPITGEGGLRDDYTPGDLGFDPLGLKPKTDEKLATMQTKELNNGRLAMIGIAGMLVQELVSPVNIL 112
            MGPDYIGPAVDHFQEI+A++PEFW FSLL +AL+EY +IT A+AEPS +TGEGGLRD+Y+PGDLGFDPL LKP     L TMQTKELNNGRLAMIGIAG LVQELV+P NIL
Sbjct:   63 MGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174

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BLAST of mRNA_M-pyrifera_M_contig6624.16076.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 9.230e-57
Identity = 86/113 (76.11%), Postives = 96/113 (84.96%), Query Frame = 0

Query:    1 MGPDYIGPAVDHFQEITAQYPEFWVFSLLGMALVEYKSITTAFAEPSPITGEGGLRDDYTPGDLGFDPLGLKPKTDEKLATMQTKELNNGRLAMIGIAGMLVQELVSPVNILG 113
            MGPDYIGPAVDHFQEI+AQ+PEFW FSLLGMA VEY +I TAF  PS +TGEGGL++DY PGDLGFDPL LKP  +  L  M+TKELNNGRLAMIGIAGML QELV+P +ILG
Sbjct:   84 MGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196

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BLAST of mRNA_M-pyrifera_M_contig6624.16076.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 4.240e-55
Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 0

Query:    1 MGPDYIGPAVDHFQEITAQYPEFWVFSLLGMALVEYKSITTAFAEPSPITGEGGLRDDYTPGDLGFDPLGLKPKTDEKLATMQTKELNNGRLAMIGIAGMLVQELVSPVNILG 113
            MGPDYIGPAVDHFQEITA++P+FW +SLLGMA +EY +I  A+AEPSP+TGEGGLRD+Y+PGDLGFDP  +KPK    L  MQ KELNNGRLAMIGI GMLVQELV+  +ILG
Sbjct:  106 MGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218

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BLAST of mRNA_M-pyrifera_M_contig6624.16076.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 3.080e-54
Identity = 85/113 (75.22%), Postives = 96/113 (84.96%), Query Frame = 0

Query:    1 MGPDYIGPAVDHFQEITAQYPEFWVFSLLGMALVEYKSITTAFAEPSPITGEGGLRDDYTPGDLGFDPLGLKPKTDEKLATMQTKELNNGRLAMIGIAGMLVQELVSPVNILG 113
            MGPDYIGPAVDHFQEI+AQ+PEFW FSLLGMA +EY +I TAF  PS +TGEGGL++DY PGDLGFDPL LKP  +  L  M+TKELNNGRLAMIGIAGML QELV+P +ILG
Sbjct:  280 MGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392

[Close]

BLAST of mRNA_M-pyrifera_M_contig6624.16076.1 vs. uniprot
Match: A0A6H5JVY1_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVY1_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 4.340e-53
Identity = 85/131 (64.89%), Postives = 96/131 (73.28%), Query Frame = 0

Query:    1 MGPDYIGPAVDHFQEITAQYPE------------------FWVFSLLGMALVEYKSITTAFAEPSPITGEGGLRDDYTPGDLGFDPLGLKPKTDEKLATMQTKELNNGRLAMIGIAGMLVQELVSPVNILG 113
            MGPDYIGPAVDHFQEI+AQ+PE                  FW FSLLGMA +EY +I TAF  PS +TGEGGL++DY PGDLGFDPL LKP  +  L  M+TKELNNGRLAMIGIAGML QELV+P +ILG
Sbjct:    1 MGPDYIGPAVDHFQEISAQFPEPFPLCTFLPAIPVSPQPQFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 131

[Close]

BLAST of mRNA_M-pyrifera_M_contig6624.16076.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 3.620e-50
Identity = 79/112 (70.54%), Postives = 92/112 (82.14%), Query Frame = 0

Query:    1 MGPDYIGPAVDHFQEITAQYPEFWVFSLLGMALVEYKSITTAFAEPSPITGEGGLRDDYTPGDLGFDPLGLKPKTDEKLATMQTKELNNGRLAMIGIAGMLVQELVSPVNIL 112
            MG D+IGPA+ HFQEI+AQ+PEFW FSLLGMA +EY +I TAF  PS +TGEGGL++DY PGDLGFDPL LKP  +  L  M+TKELNNGRLAMIGIAGML QELV+  +IL
Sbjct:  108 MGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219

[Close]

BLAST of mRNA_M-pyrifera_M_contig6624.16076.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 7.240e-47
Identity = 72/113 (63.72%), Postives = 91/113 (80.53%), Query Frame = 0

Query:    1 MGPDYIGPAVDHFQEITAQYPEFWVFSLLGMALVEYKSITTAFAEPSPITGEGGLRDDYTPGDLGFDPLGLKPKTDEKLATMQTKELNNGRLAMIGIAGMLVQELVSPVNILG 113
            +GPDYIGPA+ HF+EITA++P+FW  +LL +A +EY+ I   FAE  P+TGEGG+R DY PGDLGFDPLGL P+ + +L  M+TKELN+GRLAMIGI GM+VQELV P+ I G
Sbjct:  159 LGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig6624.16076.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig6624.16076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7S1_ECTSI	2.770e-61	80.53	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5L7D2_9PHAE	1.070e-59	79.46	LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D7G7Q6_ECTSI	1.450e-58	76.99	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7Q7_ECTSI	6.400e-58	77.68	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S5_ECTSI	9.230e-57	76.11	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S0_ECTSI	4.240e-55	73.45	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JWB4_9PHAE	3.080e-54	75.22	LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5JVY1_9PHAE	4.340e-53	64.89	LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D7G7Q9_ECTSI	3.620e-50	70.54	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G5B4_ECTSI	7.240e-47	63.72	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 21..104 e-value: 6.2E-21 score: 75.6
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 2..113 e-value: 2.3E-21 score: 78.5
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 8..107
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 15..112
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 8..107

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig6624	contig	M-pyrifera_M_contig6624:11640..12999 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig6624.16076.1	mRNA_M-pyrifera_M_contig6624.16076.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig6624 11542..13019 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig6624.16076.1 ID=prot_M-pyrifera_M_contig6624.16076.1|Name=mRNA_M-pyrifera_M_contig6624.16076.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp
MGPDYIGPAVDHFQEITAQYPEFWVFSLLGMALVEYKSITTAFAEPSPIT
GEGGLRDDYTPGDLGFDPLGLKPKTDEKLATMQTKELNNGRLAMIGIAGM
LVQELVSPVNILG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022796	Chloroa_b-bind
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR001344	Chloro_AB-bd_pln