prot_M-pyrifera_M_contig65969.16017.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig65969.16017.1
Unique Nameprot_M-pyrifera_M_contig65969.16017.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length120
Homology
BLAST of mRNA_M-pyrifera_M_contig65969.16017.1 vs. uniprot
Match: A0A7S0JVT2_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JVT2_CAFRO)

HSP 1 Score: 85.1 bits (209), Expect = 4.510e-17
Identity = 64/121 (52.89%), Postives = 88/121 (72.73%), Query Frame = 0
Query:    1 LVKRVYQAFDSDRDGNLDVRELFHGLIRATRGSLEDRARFLFRXXXXXXXXXXXXXXXYRMLLFSQAKK-DLRHKDAQTVMALLDEDGNGCVSEDEFVAACLREGATLLHLFGRVFGRTGV 120
            L  RV++ FD+D  G++D+REL+ G++RATRGSLE+RA F   XXXXXXXXXXXXXXX  +LL++Q++K  +   DA+ V+  LD DGNG V   E+VAA +R   ++L    RVFG+TG+
Sbjct:  162 LAARVFRLFDADGGGSVDLRELYAGMLRATRGSLEERAEFFXXXXXXXXXXXXXXXXXKSLLLYAQSRKLAVTQDDARHVIRALDADGNGSVDLAEWVAA-IRRSPSVLRSVSRVFGQTGL 281          
BLAST of mRNA_M-pyrifera_M_contig65969.16017.1 vs. uniprot
Match: A0A5A8C3J4_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C3J4_CAFRO)

HSP 1 Score: 75.5 bits (184), Expect = 1.850e-13
Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 0
Query:    1 LVKRVYQAFDSDRDGNLDVRELFHGLIRATRGSLEDRARFLFRXXXXXXXXXXXXXXXYRMLLFSQAKK-DLRHKDAQTVMALLDEDGNGCVSEDEFVAACLREGATLLHL 110
            L  RV++ FD+D  G++D+REL+ G++RATRGSLE+RA F   XXXXXXXXXXXXXXX  +LL++Q++K  +   DA+ V+  LD DGNG V   E+VAA  R  + L  L
Sbjct:  779 LAARVFRLFDADGGGSVDLRELYAGMLRATRGSLEERAEFFXXXXXXXXXXXXXXXXXKSLLLYAQSRKLAVTQDDARHVIRALDADGNGSVDLAEWVAAIRRSPSVLRSL 889          
BLAST of mRNA_M-pyrifera_M_contig65969.16017.1 vs. uniprot
Match: A0A5A8CYV4_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYV4_CAFRO)

HSP 1 Score: 73.9 bits (180), Expect = 6.220e-13
Identity = 58/111 (52.25%), Postives = 78/111 (70.27%), Query Frame = 0
Query:    1 LVKRVYQAFDSDRDGNLDVRELFHGLIRATRGSLEDRARFLFRXXXXXXXXXXXXXXXYRMLLFSQAKK-DLRHKDAQTVMALLDEDGNGCVSEDEFVAACLREGATLLHL 110
            L  RV++ FD+D  G++D+REL+ G++RATRGSLE+RA F   XXXXXXXXXXXXXXX  +LL++Q++K  +   DA+ V+  LD DGNG V   E+V A  R  + L  L
Sbjct:  422 LAARVFRLFDADGGGSVDLRELYAGMLRATRGSLEERAEFFXXXXXXXXXXXXXXXXXKSLLLYAQSRKLAVTQDDARHVIRALDADGNGSVDLAEWVTAIRRSPSVLRSL 532          
BLAST of mRNA_M-pyrifera_M_contig65969.16017.1 vs. uniprot
Match: D7FII4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII4_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 1.190e-5
Identity = 32/99 (32.32%), Postives = 48/99 (48.48%), Query Frame = 0
Query:    5 VYQAFDSDRDGNLDVRELFHGLIRATRGSLEDRARFLFRXXXXXXXXXXXXXXXYRMLL---FSQAKKDLRHKDAQTVMALLDEDGNGCVSEDEFVAAC 100
            ++Q FD DR G +DVRE    L      S +D+ +F F                 R+L     +Q++ ++  K   T+MA  D+DG+G V+ DEFV  C
Sbjct:  653 LFQLFDGDRSGQIDVREFMISLTNFAGASKDDKLKFAFMIFDEDGNGVITKQELARILKANHMAQSEAEVARK-TDTIMAQADKDGDGVVTFDEFVIVC 750          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65969.16017.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S0JVT2_CAFRO4.510e-1752.89Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A5A8C3J4_CAFRO1.850e-1353.15Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8CYV4_CAFRO6.220e-1352.25Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
D7FII4_ECTSI1.190e-532.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00450RECOVERINcoord: 29..48
score: 31.15
coord: 5..26
score: 38.29
NoneNo IPR availableGENE3D1.10.238.10coord: 1..110
e-value: 5.4E-25
score: 90.0
NoneNo IPR availablePANTHERPTHR23055:SF91NEUROCALCIN HOMOLOGcoord: 2..108
IPR002048EF-hand domainSMARTSM00054efh_1coord: 75..103
e-value: 0.72
score: 18.9
coord: 1..29
e-value: 21.0
score: 7.1
coord: 37..65
e-value: 11.0
score: 9.2
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 71..99
e-value: 0.003
score: 17.4
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 3..61
e-value: 6.7E-9
score: 36.1
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 33..68
score: 11.473
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..32
score: 9.046
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 71..106
score: 11.054
IPR028846Recoverin familyPANTHERPTHR23055CALCIUM BINDING PROTEINScoord: 2..108
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 46..58
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 10..22
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 84..96
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 2..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65969contigM-pyrifera_M_contig65969:929..1288 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65969.16017.1mRNA_M-pyrifera_M_contig65969.16017.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig65969 929..1288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig65969.16017.1 ID=prot_M-pyrifera_M_contig65969.16017.1|Name=mRNA_M-pyrifera_M_contig65969.16017.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
LVKRVYQAFDSDRDGNLDVRELFHGLIRATRGSLEDRARFLFRCFDADGS
GELDTSEVYRMLLFSQAKKDLRHKDAQTVMALLDEDGNGCVSEDEFVAAC
LREGATLLHLFGRVFGRTGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR028846Recoverin
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair