prot_M-pyrifera_M_contig65361.15897.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig65361.15897.1
Unique Name	prot_M-pyrifera_M_contig65361.15897.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	64

Homology

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BLAST of mRNA_M-pyrifera_M_contig65361.15897.1 vs. uniprot
Match: D8LIU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU3_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.580e-26
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 0

Query:    1 MWKATGIRKTGDQCRTRWTKVDDPSITKGAWTAKEDELLSSAVRERTTGDSPPPWVAVSE 60
            MWKATGIRKTGDQCRTRWTKVD+PSITKGAW+  EDELL  AV E T  DSPPPWVA+SE
Sbjct:  324 MWKATGIRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISE 383

[Close]

BLAST of mRNA_M-pyrifera_M_contig65361.15897.1 vs. uniprot
Match: A0A6H5JFS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFS7_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.500e-26
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 0

Query:    1 MWKATGIRKTGDQCRTRWTKVDDPSITKGAWTAKEDELLSSAVRERTTGDSPPPWVAVSE 60
            MWKATGIRKTGDQCRTRWTKVD+PSITKGAW+  EDELL  AV E T  DSPPPWVA+SE
Sbjct:  152 MWKATGIRKTGDQCRTRWTKVDNPSITKGAWSQHEDELLYKAVNEMTKEDSPPPWVAISE 211

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig65361.15897.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig65361.15897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LIU3_ECTSI	1.580e-26	81.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JFS7_9PHAE	3.500e-26	81.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 1..22 score: 4.53
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 23..63 score: 9.224
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 8..60

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig65361	contig	M-pyrifera_M_contig65361:948..1139 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig65361.15897.1	mRNA_M-pyrifera_M_contig65361.15897.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig65361 918..1139 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig65361.15897.1 ID=prot_M-pyrifera_M_contig65361.15897.1|Name=mRNA_M-pyrifera_M_contig65361.15897.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=64bp
MWKATGIRKTGDQCRTRWTKVDDPSITKGAWTAKEDELLSSAVRERTTGD
SPPPWVAVSEGVG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017877	Myb-like_dom
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf