prot_M-pyrifera_M_contig65278.15879.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig65278.15879.1
Unique Nameprot_M-pyrifera_M_contig65278.15879.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length187
Homology
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A7S1T447_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T447_9CHLO)

HSP 1 Score: 113 bits (283), Expect = 3.550e-26
Identity = 70/177 (39.55%), Postives = 88/177 (49.72%), Query Frame = 0
Query:    5 DKDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPC--HAACAHAIR-RRPGAPLPRHSHRPH--------DVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCGGSSLPLA 170
            D DA C VCG G S + + IV+CE CD+ VHQ CYGV AIP G+W C PC  H     A    RP    PR   +          D  C LCP +GGA   +A  +   +W H +C     R HP    L  +     D +VGL  V++   +  C+VCGS+ GVVVPC  S    A
Sbjct:   56 DADAVCVVCGEGASVSPNVIVYCERCDIGVHQRCYGVTAIPTGEWFCWPCAKHEEILEARGVPRPQIRPPRWQRKARSALEGGSLDTTCALCPNKGGAYRRTADGK---QWVHEVCA----RWHPEVSLL--EAPPGPDAIVGLGDVRAERWEQPCAVCGSSAGVVVPCEASGCSFA 223          
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A2V0PFF9_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PFF9_9CHLO)

HSP 1 Score: 112 bits (280), Expect = 2.350e-25
Identity = 69/174 (39.66%), Postives = 84/174 (48.28%), Query Frame = 0
Query:    7 DATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRR-------RP--------GAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCGGS 165
            D  CAVCG G S   + IVFCE CD+AVHQ+CYG+  +PEG+WLC PC    A    R       RP        GAP          V C LCPVR GA   S   +G  RW HL+C          HP +  +     D + GL +V+  L    C++C  AHG V  CG S
Sbjct:  777 DEVCAVCGDGASEAPNVIVFCERCDVAVHQACYGIAEVPEGEWLCWPCSLHEAQLRARGVPQPQIRPPRWATAGAGAPAAALEGGAGSVECALCPVRLGAFKRSR-EDG--RWCHLVCAH-------HHPEVVVEAGDICDAISGLGAVRPELAAAQCALCHRAHGAVARCGAS 940          
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A2K1YI69_POPTR (Uncharacterized protein n=7 Tax=Saliceae TaxID=238069 RepID=A0A2K1YI69_POPTR)

HSP 1 Score: 107 bits (267), Expect = 1.560e-24
Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 0
Query:    1 REEEDKDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYG---VLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCGGSSLPLA 170
            +EEED    CA+C   +    D IVFC+ CDL VH +CYG   +  +P+GDW C+ C A+ +    ++P             ++C LCP++GGAL P+A       WAH++C  L+       P + +++   ++ +V  S V     +  C VC S  G V+ C     PLA
Sbjct:  139 KEEEDDGILCAICQSTDGDPTDPIVFCDGCDLMVHTTCYGNPLIKGVPDGDWFCSQCLASKSDKETKQPS------------LSCCLCPIKGGALKPTATIGRDESWAHIVCALLI-------PEVFFEDPDGREGIV-YSKVPKRRWEEKCYVCKSRKGCVIDCSEPKCPLA 291          
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A7S1G3S2_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3S2_9STRA)

HSP 1 Score: 108 bits (271), Expect = 3.840e-24
Identity = 58/158 (36.71%), Postives = 75/158 (47.47%), Query Frame = 0
Query:    5 DKDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPC 162
            D DA C VC  G  T+ + I+FCE CD+AVHQ CYGV  +PE DW C PC                         V C LC   GGAL P+A     RRWAH+ CV+ +       P   ++ND + + VVGL +V +   +  C  C    G  + C
Sbjct:   24 DDDAVCVVCMDGTVTDGNEILFCEKCDVAVHQMCYGVAVVPEDDWYCTPCDM-----------------DEDVRTVRCALCKCDGGALKPTALVGRKRRWAHVACVNWV-------PGATFNNDDTLEEVVGLETVDAARFQLQCVSCKRRGGACIQC 157          
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A146HAE5_MYCCL (Bromodomain and PHD finger-containing protein 3 (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HAE5_MYCCL)

HSP 1 Score: 106 bits (265), Expect = 7.530e-24
Identity = 56/158 (35.44%), Postives = 75/158 (47.47%), Query Frame = 0
Query:    6 KDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCG 163
            +D+TCA+C   E  N + IVFC+ C+LAVHQ CYGV  IPEG WLC  C  +  +                   V+C LCP  GGA   +   +    W HLLC   +       P     NDA  + ++G+ S+     K  CS+C S  G  + CG
Sbjct:   41 EDSTCAICDDAEGENSNAIVFCDGCNLAVHQDCYGVPYIPEGQWLCRKCTVSPDNT------------------VSCLLCPNEGGAFKQTTQGQ----WVHLLCAIWV-------PETRVSNDAFMEPIIGVDSISKQRWKLKCSICPSHGGACIQCG 169          
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A2P6U1C4_CHLSO (Peregrin isoform X1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U1C4_CHLSO)

HSP 1 Score: 107 bits (268), Expect = 9.590e-24
Identity = 64/175 (36.57%), Postives = 88/175 (50.29%), Query Frame = 0
Query:    3 EEDKDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPC----HAACAHAIRR---RPGAPLPRHSHRPHD-----VACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSH---PHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPC 162
            E D++A CAVCG G S   + IVFC+ CD+AVHQ CYG+  +PEG+WLC PC    H   A  +     RP       + +P D     V C LCP++ GA     A +G +RW H  C   +     S+   P LG      ++ V GL  V+    +  C++CG   G V+ C
Sbjct:  822 EADQEAFCAVCGDGHSAAHNQIVFCDRCDVAVHQQCYGIAVVPEGEWLCEPCREYEHVLRAQGVPETDIRPPGHAEAVNRQPLDGGARSVRCALCPIKYGAF--KKAEDG-QRWVHSACALWMPETFLSYREVPGLG-----RQEFVAGLEKVKHDRLESRCAICGLTDGAVMGC 988          
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A8H6RYP9_MYCCL (Bromodomain-containing protein n=2 Tax=Mycena chlorophos TaxID=658473 RepID=A0A8H6RYP9_MYCCL)

HSP 1 Score: 107 bits (266), Expect = 1.730e-23
Identity = 56/158 (35.44%), Postives = 75/158 (47.47%), Query Frame = 0
Query:    6 KDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCG 163
            +D+TCA+C   E  N + IVFC+ C+LAVHQ CYGV  IPEG WLC  C  +  +                   V+C LCP  GGA   +   +    W HLLC   +       P     NDA  + ++G+ S+     K  CS+C S  G  + CG
Sbjct:  132 EDSTCAICDDAEGENSNAIVFCDGCNLAVHQDCYGVPYIPEGQWLCRKCTVSPDNT------------------VSCLLCPNEGGAFKQTTQGQ----WVHLLCAIWV-------PETRVSNDAFMEPIIGVDSISKQRWKLKCSICPSRGGACIQCG 260          
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A8H6TFN1_9AGAR (Putative bromo domain and PHD finger-containing protein 3 n=1 Tax=Mycena kentingensis (nom. inval.) TaxID=1325293 RepID=A0A8H6TFN1_9AGAR)

HSP 1 Score: 106 bits (265), Expect = 2.360e-23
Identity = 60/165 (36.36%), Postives = 78/165 (47.27%), Query Frame = 0
Query:    6 KDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCGGSSLPLA 170
            +D+TCA+C   E  N + IVFC+ C+LAVHQ CYGV  IPEG WLC  C  +        P  P          V+C LCP  GGA   +   +    WAHLLC   +       P     ND   + ++G+  +     K  CS+CG   G  + CG  S  LA
Sbjct:  132 EDSTCAICDDAEGENSNAIVFCDGCNLAVHQDCYGVPYIPEGQWLCRKCTVS--------PENP----------VSCMLCPNEGGAFKQTPQGD----WAHLLCAIWV-------PETRVSNDTFMEPIIGVHQIVKQRWKLKCSICGLKMGACIQCGKQSCFLA 267          
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A8H6WAT2_9AGAR (Bromodomain containing protein n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6WAT2_9AGAR)

HSP 1 Score: 106 bits (264), Expect = 3.200e-23
Identity = 59/157 (37.58%), Postives = 79/157 (50.32%), Query Frame = 0
Query:    6 KDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPC 162
            +D+TCAVC   E  N + IVFC+ C+LAVHQ CYGV  IPEG WLC  C  +        P  P          V+C LCP  GGA      ++G  +W HLLC   +       P     NDA  + ++G++++     K  CS+C S HG  + C
Sbjct:  131 EDSTCAVCDDPEGENSNAIVFCDGCNLAVHQDCYGVPYIPEGQWLCRKCTVS--------PENP----------VSCILCPNEGGAF--KQTTQG--KWIHLLCAIWV-------PETRVSNDAFMEPIIGVNTIPKSRWKLRCSLCDSRHGACIQC 258          
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: UPI0004409A55 (uncharacterized protein n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004409A55)

HSP 1 Score: 105 bits (263), Expect = 4.360e-23
Identity = 60/165 (36.36%), Postives = 78/165 (47.27%), Query Frame = 0
Query:    6 KDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCGGSSLPLA 170
            +D+TCA+C   E  N + IVFC+ C+LAVHQ CYGV  IPEG WLC  C  +        P  P          V+C LCP  GGA   + + +    WAHLLC   +       P     ND   + + G+  +     K  CS+CG   G  + C  SS  LA
Sbjct:  128 EDSTCAICDDAEGENANAIVFCDGCNLAVHQDCYGVPYIPEGQWLCRKCTVS--------PENP----------VSCILCPNEGGAFKQTVSGD----WAHLLCAIWV-------PETRVANDVFMEPITGVDKINKQRWKLKCSLCGIREGACIQCSKSSCFLA 263          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1T447_9CHLO3.550e-2639.55Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A2V0PFF9_9CHLO2.350e-2539.66Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A2K1YI69_POPTR1.560e-2432.95Uncharacterized protein n=7 Tax=Saliceae TaxID=238... [more]
A0A7S1G3S2_9STRA3.840e-2436.71Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A146HAE5_MYCCL7.530e-2435.44Bromodomain and PHD finger-containing protein 3 (F... [more]
A0A2P6U1C4_CHLSO9.590e-2436.57Peregrin isoform X1 n=1 Tax=Chlorella sorokiniana ... [more]
A0A8H6RYP9_MYCCL1.730e-2335.44Bromodomain-containing protein n=2 Tax=Mycena chlo... [more]
A0A8H6TFN1_9AGAR2.360e-2336.36Putative bromo domain and PHD finger-containing pr... [more]
A0A8H6WAT2_9AGAR3.200e-2337.58Bromodomain containing protein n=1 Tax=Mycena indi... [more]
UPI0004409A554.360e-2336.36uncharacterized protein n=1 Tax=Fomitiporia medite... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 9..55
e-value: 3.2E-9
score: 46.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..61
e-value: 1.9E-20
score: 74.1
NoneNo IPR availablePFAMPF13832zf-HC5HC2H_2coord: 81..187
e-value: 5.7E-8
score: 32.9
NoneNo IPR availablePFAMPF13831PHD_2coord: 22..54
e-value: 2.4E-11
score: 43.0
NoneNo IPR availablePANTHERPTHR13793PHD FINGER PROTEINScoord: 2..187
NoneNo IPR availablePANTHERPTHR13793:SF107BR140, ISOFORM Acoord: 2..187
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 10..54
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 7..57
score: 9.668
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 3..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65278contigM-pyrifera_M_contig65278:563..1123 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65278.15879.1mRNA_M-pyrifera_M_contig65278.15879.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig65278 563..1123 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig65278.15879.1 ID=prot_M-pyrifera_M_contig65278.15879.1|Name=mRNA_M-pyrifera_M_contig65278.15879.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp
REEEDKDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWL
CAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEG
PRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCS
VCGSAHGVVVPCGGSSLPLASSSHDCSHKSYVHVSCA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD