mRNA_M-pyrifera_M_contig65278.15879.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A7S1T447_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T447_9CHLO) HSP 1 Score: 113 bits (283), Expect = 3.550e-26 Identity = 70/177 (39.55%), Postives = 88/177 (49.72%), Query Frame = 1
Query: 13 DKDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPC--HAACAHAIR-RRPGAPLPRHSHRPH--------DVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCGGSSLPLA 510
D DA C VCG G S + + IV+CE CD+ VHQ CYGV AIP G+W C PC H A RP PR + D C LCP +GGA +A + +W H +C R HP L + D +VGL V++ + C+VCGS+ GVVVPC S A
Sbjct: 56 DADAVCVVCGEGASVSPNVIVYCERCDIGVHQRCYGVTAIPTGEWFCWPCAKHEEILEARGVPRPQIRPPRWQRKARSALEGGSLDTTCALCPNKGGAYRRTADGK---QWVHEVCA----RWHPEVSLL--EAPPGPDAIVGLGDVRAERWEQPCAVCGSSAGVVVPCEASGCSFA 223
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A2V0PFF9_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PFF9_9CHLO) HSP 1 Score: 112 bits (280), Expect = 2.350e-25 Identity = 69/174 (39.66%), Postives = 84/174 (48.28%), Query Frame = 1
Query: 19 DATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRR-------RP--------GAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCGGS 495
D CAVCG G S + IVFCE CD+AVHQ+CYG+ +PEG+WLC PC A R RP GAP V C LCPVR GA S +G RW HL+C HP + + D + GL +V+ L C++C AHG V CG S
Sbjct: 777 DEVCAVCGDGASEAPNVIVFCERCDVAVHQACYGIAEVPEGEWLCWPCSLHEAQLRARGVPQPQIRPPRWATAGAGAPAAALEGGAGSVECALCPVRLGAFKRSR-EDG--RWCHLVCAH-------HHPEVVVEAGDICDAISGLGAVRPELAAAQCALCHRAHGAVARCGAS 940
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A2K1YI69_POPTR (Uncharacterized protein n=7 Tax=Saliceae TaxID=238069 RepID=A0A2K1YI69_POPTR) HSP 1 Score: 107 bits (267), Expect = 1.560e-24 Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 1
Query: 1 REEEDKDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYG---VLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCGGSSLPLA 510
+EEED CA+C + D IVFC+ CDL VH +CYG + +P+GDW C+ C A+ + ++P ++C LCP++GGAL P+A WAH++C L+ P + +++ ++ +V S V + C VC S G V+ C PLA
Sbjct: 139 KEEEDDGILCAICQSTDGDPTDPIVFCDGCDLMVHTTCYGNPLIKGVPDGDWFCSQCLASKSDKETKQPS------------LSCCLCPIKGGALKPTATIGRDESWAHIVCALLI-------PEVFFEDPDGREGIV-YSKVPKRRWEEKCYVCKSRKGCVIDCSEPKCPLA 291
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A7S1G3S2_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3S2_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.840e-24 Identity = 58/158 (36.71%), Postives = 75/158 (47.47%), Query Frame = 1
Query: 13 DKDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPC 486
D DA C VC G T+ + I+FCE CD+AVHQ CYGV +PE DW C PC V C LC GGAL P+A RRWAH+ CV+ + P ++ND + + VVGL +V + + C C G + C
Sbjct: 24 DDDAVCVVCMDGTVTDGNEILFCEKCDVAVHQMCYGVAVVPEDDWYCTPCDM-----------------DEDVRTVRCALCKCDGGALKPTALVGRKRRWAHVACVNWV-------PGATFNNDDTLEEVVGLETVDAARFQLQCVSCKRRGGACIQC 157
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A146HAE5_MYCCL (Bromodomain and PHD finger-containing protein 3 (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HAE5_MYCCL) HSP 1 Score: 106 bits (265), Expect = 7.530e-24 Identity = 56/158 (35.44%), Postives = 75/158 (47.47%), Query Frame = 1
Query: 16 KDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCG 489
+D+TCA+C E N + IVFC+ C+LAVHQ CYGV IPEG WLC C + + V+C LCP GGA + + W HLLC + P NDA + ++G+ S+ K CS+C S G + CG
Sbjct: 41 EDSTCAICDDAEGENSNAIVFCDGCNLAVHQDCYGVPYIPEGQWLCRKCTVSPDNT------------------VSCLLCPNEGGAFKQTTQGQ----WVHLLCAIWV-------PETRVSNDAFMEPIIGVDSISKQRWKLKCSICPSHGGACIQCG 169
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A2P6U1C4_CHLSO (Peregrin isoform X1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U1C4_CHLSO) HSP 1 Score: 107 bits (268), Expect = 9.590e-24 Identity = 64/175 (36.57%), Postives = 88/175 (50.29%), Query Frame = 1
Query: 7 EEDKDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPC----HAACAHAIRR---RPGAPLPRHSHRPHD-----VACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSH---PHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPC 486
E D++A CAVCG G S + IVFC+ CD+AVHQ CYG+ +PEG+WLC PC H A + RP + +P D V C LCP++ GA A +G +RW H C + S+ P LG ++ V GL V+ + C++CG G V+ C
Sbjct: 822 EADQEAFCAVCGDGHSAAHNQIVFCDRCDVAVHQQCYGIAVVPEGEWLCEPCREYEHVLRAQGVPETDIRPPGHAEAVNRQPLDGGARSVRCALCPIKYGAF--KKAEDG-QRWVHSACALWMPETFLSYREVPGLG-----RQEFVAGLEKVKHDRLESRCAICGLTDGAVMGC 988
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A8H6RYP9_MYCCL (Bromodomain-containing protein n=2 Tax=Mycena chlorophos TaxID=658473 RepID=A0A8H6RYP9_MYCCL) HSP 1 Score: 107 bits (266), Expect = 1.730e-23 Identity = 56/158 (35.44%), Postives = 75/158 (47.47%), Query Frame = 1
Query: 16 KDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCG 489
+D+TCA+C E N + IVFC+ C+LAVHQ CYGV IPEG WLC C + + V+C LCP GGA + + W HLLC + P NDA + ++G+ S+ K CS+C S G + CG
Sbjct: 132 EDSTCAICDDAEGENSNAIVFCDGCNLAVHQDCYGVPYIPEGQWLCRKCTVSPDNT------------------VSCLLCPNEGGAFKQTTQGQ----WVHLLCAIWV-------PETRVSNDAFMEPIIGVDSISKQRWKLKCSICPSRGGACIQCG 260
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A8H6TFN1_9AGAR (Putative bromo domain and PHD finger-containing protein 3 n=1 Tax=Mycena kentingensis (nom. inval.) TaxID=1325293 RepID=A0A8H6TFN1_9AGAR) HSP 1 Score: 106 bits (265), Expect = 2.360e-23 Identity = 60/165 (36.36%), Postives = 78/165 (47.27%), Query Frame = 1
Query: 16 KDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCGGSSLPLA 510
+D+TCA+C E N + IVFC+ C+LAVHQ CYGV IPEG WLC C + P P V+C LCP GGA + + WAHLLC + P ND + ++G+ + K CS+CG G + CG S LA
Sbjct: 132 EDSTCAICDDAEGENSNAIVFCDGCNLAVHQDCYGVPYIPEGQWLCRKCTVS--------PENP----------VSCMLCPNEGGAFKQTPQGD----WAHLLCAIWV-------PETRVSNDTFMEPIIGVHQIVKQRWKLKCSICGLKMGACIQCGKQSCFLA 267
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: A0A8H6WAT2_9AGAR (Bromodomain containing protein n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6WAT2_9AGAR) HSP 1 Score: 106 bits (264), Expect = 3.200e-23 Identity = 59/157 (37.58%), Postives = 79/157 (50.32%), Query Frame = 1
Query: 16 KDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPC 486
+D+TCAVC E N + IVFC+ C+LAVHQ CYGV IPEG WLC C + P P V+C LCP GGA ++G +W HLLC + P NDA + ++G++++ K CS+C S HG + C
Sbjct: 131 EDSTCAVCDDPEGENSNAIVFCDGCNLAVHQDCYGVPYIPEGQWLCRKCTVS--------PENP----------VSCILCPNEGGAF--KQTTQG--KWIHLLCAIWV-------PETRVSNDAFMEPIIGVNTIPKSRWKLRCSLCDSRHGACIQC 258
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Match: UPI0004409A55 (uncharacterized protein n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004409A55) HSP 1 Score: 105 bits (263), Expect = 4.360e-23 Identity = 60/165 (36.36%), Postives = 78/165 (47.27%), Query Frame = 1
Query: 16 KDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLCAPCHAACAHAIRRRPGAPLPRHSHRPHDVACTLCPVRGGALVPSAASEGPRRWAHLLCVSLLQRCHPSHPHLGYDNDASKDHVVGLSSVQSLLRKHSCSVCGSAHGVVVPCGGSSLPLA 510
+D+TCA+C E N + IVFC+ C+LAVHQ CYGV IPEG WLC C + P P V+C LCP GGA + + + WAHLLC + P ND + + G+ + K CS+CG G + C SS LA
Sbjct: 128 EDSTCAICDDAEGENANAIVFCDGCNLAVHQDCYGVPYIPEGQWLCRKCTVS--------PENP----------VSCILCPNEGGAFKQTVSGD----WAHLLCAIWV-------PETRVANDVFMEPITGVDKINKQRWKLKCSLCGIREGACIQCSKSSCFLA 263 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65278.15879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65278.15879.1 >prot_M-pyrifera_M_contig65278.15879.1 ID=prot_M-pyrifera_M_contig65278.15879.1|Name=mRNA_M-pyrifera_M_contig65278.15879.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp REEEDKDATCAVCGGGESTNKDNIVFCESCDLAVHQSCYGVLAIPEGDWLback to top mRNA from alignment at M-pyrifera_M_contig65278:563..1123+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65278.15879.1 ID=mRNA_M-pyrifera_M_contig65278.15879.1|Name=mRNA_M-pyrifera_M_contig65278.15879.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig65278:563..1123+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65278:563..1123+ >mRNA_M-pyrifera_M_contig65278.15879.1 ID=mRNA_M-pyrifera_M_contig65278.15879.1|Name=mRNA_M-pyrifera_M_contig65278.15879.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig65278:563..1123+ (Macrocystis pyrifera P11B4 male)back to top |