prot_M-pyrifera_M_contig13347.5926.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13347.5926.1
Unique Nameprot_M-pyrifera_M_contig13347.5926.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length114
Homology
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BLAST of mRNA_M-pyrifera_M_contig13347.5926.1 vs. uniprot
Match: D7G0C7_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C7_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 4.470e-29
Identity = 52/103 (50.49%), Postives = 74/103 (71.84%), Query Frame = 0 
Query:    3 FCARRKGLRKRLNDIAGATDERLWLDVDHRYERYKGVRSAWCNWRRFSKQQALEISVSFGGRTLSRVLTMLTTDLPHVHYGFPDLVLWKPRGRAGVSRGDRGG 105
            FC+RR+GL +RL  I+ ++DE+LWLDV  RY+R+ GV + WC+W RF KQQ +EI  +FGGR LS +L+  TT +  + +GFPD+VLW+P+   GV+    GG
Sbjct:  739 FCSRREGLSRRLRTISRSSDEQLWLDVGQRYDRFSGVVAIWCDWNRFPKQQVMEICAAFGGRRLSDLLSTTTTTITQLRFGFPDVVLWRPKSDKGVAESRSGG 841
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BLAST of mRNA_M-pyrifera_M_contig13347.5926.1 vs. uniprot
Match: D7G0C5_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C5_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.420e-20
Identity = 51/113 (45.13%), Postives = 68/113 (60.18%), Query Frame = 0 
Query:    3 FCARRKGLRKRLNDIAGATDERLWLDVDHRYERYKGVRSAWCNWRRFSKQQALEISVSFGGRTLSRVLTMLTTDLPHVHYGFPDLVLWKPRGR-----AGVSRGDRGGRNWRT 110
            F  RR+GL  RL  I    D +L+ DV  RY+R +GVRS WC+W  F KQQ +EI V+FGG+ LS +L  LT +L  +  GFPD+VL +P+G         S G R  R+W+ 
Sbjct:  826 FTTRREGLPDRLATIGQYADRQLFSDVGQRYDRLRGVRSGWCDWNVFPKQQIMEICVAFGGKRLSDLLKTLTNNLADMDKGFPDVVLRRPKGADFGAGGSSSGGGRDERDWKA 938
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BLAST of mRNA_M-pyrifera_M_contig13347.5926.1 vs. uniprot
Match: A0A6H5KFJ9_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 6.930e-8
Identity = 36/105 (34.29%), Postives = 52/105 (49.52%), Query Frame = 0 
Query:    3 FCARRKGLRKRLNDIAGATDERLWLDVDHRYERYKGVRSAWCN--WRRFSKQQALEISVSFGGRTLSRVLTMLTTDLPHVHYGFPDLVLWKPRGRAGVSRGDRGG 105
            FC+RR+GL  RL  I+ ++DE+LWLDV  RY+R+   +  WC+  WR +              R   R             +GFPD+VLW+P+   G +    GG
Sbjct:  857 FCSRREGLSIRLRTISRSSDEQLWLDVGQRYDRFP-KQQVWCDRAWRYYLDND----------RASKRR-----------RFGFPDVVLWRPKSDKGAAESRSGG 939
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13347.5926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0C7_ECTSI4.470e-2950.49Fanconi-associated nuclease n=1 Tax=Ectocarpus sil... [more]
D7G0C5_ECTSI1.420e-2045.13Fanconi-associated nuclease n=1 Tax=Ectocarpus sil... [more]
A0A6H5KFJ9_9PHAE6.930e-834.29Fanconi-associated nuclease n=1 Tax=Ectocarpus sp.... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014883VRR-NUC domainPFAMPF08774VRR_NUCcoord: 29..95
e-value: 2.5E-6
score: 27.5
IPR033315Fanconi-associated nuclease 1-likePANTHERPTHR15749FAMILY NOT NAMEDcoord: 5..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13347contigM-pyrifera_M_contig13347:352..3513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13347.5926.1mRNA_M-pyrifera_M_contig13347.5926.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13347 352..3513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13347.5926.1 ID=prot_M-pyrifera_M_contig13347.5926.1|Name=mRNA_M-pyrifera_M_contig13347.5926.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp
MHFCARRKGLRKRLNDIAGATDERLWLDVDHRYERYKGVRSAWCNWRRFS
KQQALEISVSFGGRTLSRVLTMLTTDLPHVHYGFPDLVLWKPRGRAGVSR
GDRGGRNWRTGEFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014883VRR_NUC
IPR033315Fan1-like