prot_M-pyrifera_M_contig13252.5895.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13252.5895.1
Unique Nameprot_M-pyrifera_M_contig13252.5895.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length500
Homology
BLAST of mRNA_M-pyrifera_M_contig13252.5895.1 vs. uniprot
Match: D7G3B8_ECTSI (DNA primase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B8_ECTSI)

HSP 1 Score: 522 bits (1345), Expect = 3.580e-170
Identity = 315/516 (61.05%), Postives = 357/516 (69.19%), Query Frame = 0
Query:    1 RYSRSKQIVLCMDADAAGQRAVERLCESPASSGLDSLSESGVSMSVATIPEGSGCKDPADYLQAHGAEAFRAEVIDKAVPWSDWHGDRILAEHDFTSDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFARALAGGDEAMRHQLEFDLMAMCNEKRARKNALRRRVTSPSVSQPHPQPTPSTLENPGMMKKREESRLKRTKFGGKGSAIWSPAKGEVWGG---EGQTMDPALRSRILEQAQRFLLALVVHDPSRRASCAEEAKRRGLYLGSERRQWLFDAVTSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------EALEAGGEMLFAEIRAAAPPGYFGLKGRARPHGD----RDGRGEGEGTLDWVFERKEAVRVAKGGNVDLVLLEVVMVMLKEKAATSVHSLSLELAGISNDIARTMAEAAAXXXXXXXXXXXXXXXTQPLLPEELSARGVGRSRAEAQKE------VDRLKARQSELFELIQLKRE-VMFIEAHARAWGQACARAR 496
            RY++SK+++LCMD DAAG+RAVERLCESPASSGLDSLSE+GVS+SVATIPE  GCKDPAD+LQAHGAE FRA+V+ KAVPWSDW+GD ILA+HDF  DANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFA+ALAGG+EAMRHQLEFDLM M NEKRARKNALRRR    + S        S     GM KKREESRLKR K+G K   IWSP+  + +GG   E +  + ALR RIL+QAQRFLLALVVHDPSRRA C EE  R GLYLG ERRQWLF+A+T++            XXXXXXXX          A      EALEAGG++LFAE+RAAAP GYF L+G+A   G      D  GE E TLDWVFER EA RVAKG N DLVLLEVVMVMLKE+AA  +HSLSLELA  SN IARTMAEAA                 +     E      G+              V+RLK RQSELFE+IQ +RE V   EA  +A+     + R
Sbjct:  564 RYTKSKRVILCMDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDPGCKDPADFLQAHGAEEFRAKVMGKAVPWSDWYGDSILADHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEKRARKNALRRRSGHYTGSWNAGVNAGSAPPAQGM-KKREESRLKREKYGSKRMTIWSPSMEQEYGGGSEESKATELALRGRILDQAQRFLLALVVHDPSRRAKCLEEVSRHGLYLGGERRQWLFNALTASVSPDPALPSAAGXXXXXXXXQDGAGRDSPPAWGGPTPEALEAGGDVLFAEVRAAAPGGYFALRGKAAGKGGGGVGADDEGEKEDTLDWVFERAEAERVAKGANTDLVLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLALDPPQASGEPPETATAPESPGVAAGKXXXXXXXXXXXXXXVERLKVRQSELFEMIQEQREEVTEFEARRKAFTNRLPKVR 1078          
BLAST of mRNA_M-pyrifera_M_contig13252.5895.1 vs. uniprot
Match: A0A6H5K157_9PHAE (Toprim domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K157_9PHAE)

HSP 1 Score: 515 bits (1326), Expect = 6.800e-167
Identity = 326/583 (55.92%), Postives = 369/583 (63.29%), Query Frame = 0
Query:    1 RYSRSKQIVLCMDADAAGQRAVERLCESPASSGLDSLSESGVSMSVATIPEGSGCKDPADYLQAHGAEAFRAEVIDKAVPWSDWHGDRILAEHDFTSDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFARALAGGDEAMRHQLEFDLMAMCNEKRARKNALRRR-----------VTSPSVSQPHPQPTP-----------------------------STLEN-----------PGM-----------------MKKREESRLKRTKFGGKGSAIWSPAKGEVWGG---EGQTMDPALRSRILEQAQRFLLALVVHDPSRRASCAEEAKRRGLYLGSERRQWLFDAVTSA-----AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEALEAGGEMLFAEIRAAAPPGYFGLKGRARPHGD----RDGRGEGEGTLDWVFERKEAVRVAKGGNVDLVLLEVVMVMLKEKAATSVHSLSLELAGISNDIARTMAEAA-AXXXXXXXXXXXXXXXTQPLLPEE-----LSARGVGRSRAEAQKEVDRLKARQSELFELIQLKRE-VMFIEAHARAWGQACARAR 496
            RY++SK+++LCMD DAAG+RAVERLCESPASSGLDSLSE+GVS+SVATIPE SGCKDPAD+LQAHGAE FRA+V+DKAVPWS W+GD ILA+HDF SDANAFRRCTDRL GFMSDLSIPTDQTFHVHRFA+ALAGG+EAMRHQLEFDLM M NEKRARKNALRRR           V + S      Q                                S   N            GM                 MKKREESRLKR K+G K   IWSP+  + +GG   E +  + ALR RIL+QAQRFLLALVVHDPSRRA C EE  R GL LG ERRQWLF+A+T++     A      XXXX                    EALEAGG++LFAE+RAAAP GYF L+G+A   G      D   E E TLDWVFER EA RVAKG N DLVLLEVVMVMLKE+AA  +HSLSLELA  SN IARTMAEAA A                    PE      +  +GVGRSRAEAQ EV RLK RQSELFE+IQ +RE V  +EA  +A+ +   + R
Sbjct:  398 RYTKSKRVILCMDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDSGCKDPADFLQAHGAEEFRAKVMDKAVPWSVWYGDSILADHDFASDANAFRRCTDRLAGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEKRARKNALRRRSGHYTGSWNAGVNAGSAPPAQGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAAVNGAGGGGYLTGTEGMEGVDVVRDHSWVMERVRMKKREESRLKREKYGSKRMTIWSPSMEQEYGGGSEESKGTELALRGRILDQAQRFLLALVVHDPSRRAKCLEEVSRHGLSLGGERRQWLFNALTASVSPDPALRSAAAXXXXGDEPDGVGCDSPPGWGGPTPEALEAGGDVLFAEVRAAAPGGYFALRGKAAGKGGGGVGADDEREREDTLDWVFERAEAERVAKGANTDLVLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLALDPPHASAEPPKTAAAPESPGVAAVKGQGVGRSRAEAQAEVQRLKVRQSELFEMIQEQREEVTELEARRKAFTKRLPKVR 980          
BLAST of mRNA_M-pyrifera_M_contig13252.5895.1 vs. uniprot
Match: A0A835YIS2_9STRA (Toprim domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIS2_9STRA)

HSP 1 Score: 138 bits (348), Expect = 5.330e-32
Identity = 74/152 (48.68%), Postives = 99/152 (65.13%), Query Frame = 0
Query:    1 RYSRSKQIVLCMDADAAGQRAVERLCESPASSGLDSLSESGVSMSVATIPEGS-GCKDPADYLQAHGAEAFRAEVIDKAVPWSDWHGDRILAEHDFTSDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFARALAGGDEAMRHQLEFDLMAM 151
            R+SR +++VLCMDADAAG +AVERLCE  A   L+  + +G+ + VA I   + GCKDP+D++    A            PW+ W+ DR+LA HD   DA AFR C D+LT F+S L+ P D+T HV+R A AL+G + A+R QLE DLMAM
Sbjct:  346 RHSRGRRVVLCMDADAAGAKAVERLCEGGA---LEEAAANGIEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAPWTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAM 494          
BLAST of mRNA_M-pyrifera_M_contig13252.5895.1 vs. uniprot
Match: A0A7R9U1P3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1P3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.370e-12
Identity = 60/175 (34.29%), Postives = 86/175 (49.14%), Query Frame = 0
Query:    1 RYSRSKQIVLCMDADAAGQRAVERLCESPASSGLDSLSESGVSMSVATIPEGSGCKDPADYLQA-HGAEAFRAEVIDKAVPWSDWHGDRILAEHDFTSDAN-----------------------AFRRCTDRLTGFMSDLSIPTDQTFHVHRFARALAGGDEAMRHQLEFDLMAM 151
            R S SK+I +C+DADAAGQRA +RLC       L  L   GV   V  +    G KDP+D+LQ  H    F   +   AVP+SD++ +R++    F +DA+                       AF R    L+ F++ L    D+TF  +R A A+A  +E MR  LE D++ +
Sbjct:   25 RASPSKRITVCLDADAAGQRATDRLCAEI----LPDLIAEGVDAYVGRLD---GAKDPSDWLQGGHVGSEFVDMIRSNAVPFSDFYIERLIKR--FRADASPKDPTTNEADTLATAAQVANDQLAFHRLVSDLSDFLARLPTAADRTFAAYRTAAAVAPDNEGMRIALEADILQL 190          
BLAST of mRNA_M-pyrifera_M_contig13252.5895.1 vs. uniprot
Match: A0A7S4M4Z8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M4Z8_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.620e-12
Identity = 45/84 (53.57%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    9 VLCMDADAAGQRAVERLCESPASSGLDSLSES---GVSMSVATIPEGSGCKDPADYLQAHGAEAFRAEVIDKAVPWSDWHGDRI 89
            +LCMD D AGQ A ERLC    SSG+ S  E    GV + VA++PE  G KDPADY+ AHG EAFR +V+ +A PW  W+  RI
Sbjct:   40 ILCMDNDDAGQAATERLC----SSGMISTLEGRRIGVEVYVASLPE--GIKDPADYVTAHGGEAFRRDVLGRASPWRGWYVRRI 117          
BLAST of mRNA_M-pyrifera_M_contig13252.5895.1 vs. uniprot
Match: A0A7S2UJ00_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJ00_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.790e-8
Identity = 39/125 (31.20%), Postives = 67/125 (53.60%), Query Frame = 0
Query:   60 DYLQAHGAEAFRAEVIDKAVPWSDWHGDRILAEHDF---TSDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFARALA-----------GGDEAMRHQLEFDLMAMCNEKRARKNALRRRVTSPS 170
            +++  H  EAF+ +++D A+PWSDW+ +RI++  D    +  +++F +  + ++ F+S  S P D+T   +  A  L+           GG   +R QLE DL+ M + K   + AL RRV   S
Sbjct:    1 EFVDEHDGEAFQ-QILDTAIPWSDWYMERIVSVCDLDATSGSSDSFPQVCEAVSDFLSSFSNPADRTKRAYEAAGTLSKLLAPNRTDSVGG---LRIQLETDLLDMASRKARTREALSRRVEESS 121          
BLAST of mRNA_M-pyrifera_M_contig13252.5895.1 vs. uniprot
Match: A0A1I2KRA0_9BACL (DNA primase n=3 Tax=Planifilum TaxID=332100 RepID=A0A1I2KRA0_9BACL)

HSP 1 Score: 66.6 bits (161), Expect = 5.830e-8
Identity = 40/126 (31.75%), Postives = 67/126 (53.17%), Query Frame = 0
Query:    5 SKQIVLCMDADAAGQRAVERLCESPASSGLDSLSESGVSMSVATIPEGSGCKDPADYLQAHGAEAFRAEVIDKAVPWSDWHGDRILAEHDFTSDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFA 130
            ++ +V+C DAD AGQ A +R        GLD L + G  + VA +P G    DP D+L+  GAEAFR E++ +A+P   +  + +  + +   +    +  T R    +SDLS+  ++  ++ R A
Sbjct:  303 AENVVICYDADDAGQAAADR--------GLDLLKDQGCLVKVAQMPPG---MDPDDFLRKRGAEAFREEILAEALPLPAFKLEYLKKDFNLQDEGERMKYLT-RALDVISDLSLAIERDHYLRRLA 416          
BLAST of mRNA_M-pyrifera_M_contig13252.5895.1 vs. uniprot
Match: A0A1Z5KNR9_FISSO (Toprim domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KNR9_FISSO)

HSP 1 Score: 64.7 bits (156), Expect = 2.860e-7
Identity = 44/142 (30.99%), Postives = 70/142 (49.30%), Query Frame = 0
Query:    2 YSRSKQIVLCMDADAAGQRAVERLCESPASSGLDSLSESGVSMSVATIPEGSGCKDPADYLQAHG---------AEAFRAEVIDKAVPWSDWHGDRILAEHDFTSDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFARALA 134
            + + +Q+V C+D DAAG RA+ER+C++   + L     S   + VAT+P   G KDP +Y+             A  F A V+  AV W  W+  R++   + T+ A+  R   DR+  F S    P  +  +  + A+ LA
Sbjct:  258 HEQQRQLVFCLDNDAAGVRAMERICQNGFLTALQKQYPSAF-VKVATMPI--GIKDPGEYVDERFLAKMMPEKIAAEFEANVVTPAVDWRLWYTQRVILSCNCTTTAD-LRLTIDRVAAFWSISMSPEQRQENAPQLAKQLA 395          
BLAST of mRNA_M-pyrifera_M_contig13252.5895.1 vs. uniprot
Match: A0A7X6SUV3_9BURK (DNA primase n=1 Tax=Alcaligenaceae bacterium TaxID=2021368 RepID=A0A7X6SUV3_9BURK)

HSP 1 Score: 63.5 bits (153), Expect = 4.800e-7
Identity = 40/141 (28.37%), Postives = 76/141 (53.90%), Query Frame = 0
Query:    5 SKQIVLCMDADAAGQRAVERLCESPASSGLDSLSESGVSMSVATIPEGSGCKDPADYLQAHGAEAFRAEVIDKAVPWSDWHGDRILAEHDFTSDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFARALAGGDEAMRHQLE 145
            ++++ +  DAD AG+ A  R        GLD L  +G  + VA +PEG    DP  +L++ GA AF+ E++ KAVP S++   +IL+ ++   D     +C  +    ++++S   ++  ++   A   +  +EA+R +L+
Sbjct:  200 AEEVFIAFDADVAGENATWR--------GLDVLRSAGCQVRVAPLPEGD---DPDLFLRSKGAAAFQNEILQKAVPVSEYRLKQILSRYNL-QDRQEMLQCLHQSLLVLAEISDNLERDEYIRLLAGKFSVSEEALRLELK 328          
BLAST of mRNA_M-pyrifera_M_contig13252.5895.1 vs. uniprot
Match: A0A1L8I8G2_9BACI (DNA primase n=1 Tax=Bacillaceae bacterium G1 TaxID=1836462 RepID=A0A1L8I8G2_9BACI)

HSP 1 Score: 63.2 bits (152), Expect = 7.260e-7
Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = 0
Query:    5 SKQIVLCMDADAAGQRAVERLCESPASSGLDSLSESGVSMSVATIPEGSGCKDPADYLQAHGAEAFRAEVIDKAVPWSDWHGDRILAEHDFTSDANAFRRCTDRLTGFMSDLSIPTDQTFHVHR--FARALA 134
            ++++VLC DAD AGQ A  R        G+D L ++G S+ +A IP+G   KDP  Y++ +G EAF  EVI  A+P   +   ++  + D   + + FR            L + T+  F V R  + R LA
Sbjct:  302 AEKVVLCFDADQAGQNASLR--------GIDVLRQAGCSVRIAEIPQG---KDPDQYIRENGREAFLYEVIGNALPVVPYRLKQLRRQFDLNDEDSRFRYV-------QKALELVTELPFAVERDHYLRELA 415          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13252.5895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7G3B8_ECTSI3.580e-17061.05DNA primase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5K157_9PHAE6.800e-16755.92Toprim domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YIS2_9STRA5.330e-3248.68Toprim domain-containing protein (Fragment) n=1 Ta... [more]
A0A7R9U1P3_9STRA1.370e-1234.29Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S4M4Z8_9STRA1.620e-1253.57Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2UJ00_9STRA1.790e-831.20Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A1I2KRA0_9BACL5.830e-831.75DNA primase n=3 Tax=Planifilum TaxID=332100 RepID=... [more]
A0A1Z5KNR9_FISSO2.860e-730.99Toprim domain-containing protein n=2 Tax=Fistulife... [more]
A0A7X6SUV3_9BURK4.800e-728.37DNA primase n=1 Tax=Alcaligenaceae bacterium TaxID... [more]
A0A1L8I8G2_9BACI7.260e-733.33DNA primase n=1 Tax=Bacillaceae bacterium G1 TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 451..471
NoneNo IPR availablePFAMPF13155Toprim_2coord: 4..62
e-value: 5.3E-5
score: 23.6
NoneNo IPR availableGENE3D3.40.1360.10coord: 1..79
e-value: 5.1E-12
score: 48.0
NoneNo IPR availablePANTHERPTHR30313DNA PRIMASEcoord: 5..282
NoneNo IPR availableSUPERFAMILY56731DNA primase corecoord: 5..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13252contigM-pyrifera_M_contig13252:1042..8431 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13252.5895.1mRNA_M-pyrifera_M_contig13252.5895.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13252 1042..8431 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13252.5895.1 ID=prot_M-pyrifera_M_contig13252.5895.1|Name=mRNA_M-pyrifera_M_contig13252.5895.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=500bp
RYSRSKQIVLCMDADAAGQRAVERLCESPASSGLDSLSESGVSMSVATIP
EGSGCKDPADYLQAHGAEAFRAEVIDKAVPWSDWHGDRILAEHDFTSDAN
AFRRCTDRLTGFMSDLSIPTDQTFHVHRFARALAGGDEAMRHQLEFDLMA
MCNEKRARKNALRRRVTSPSVSQPHPQPTPSTLENPGMMKKREESRLKRT
KFGGKGSAIWSPAKGEVWGGEGQTMDPALRSRILEQAQRFLLALVVHDPS
RRASCAEEAKRRGLYLGSERRQWLFDAVTSAATAAATGAGTGTGTELGTG
LGPGPGTGTGTAEALEAGGEMLFAEIRAAAPPGYFGLKGRARPHGDRDGR
GEGEGTLDWVFERKEAVRVAKGGNVDLVLLEVVMVMLKEKAATSVHSLSL
ELAGISNDIARTMAEAAAASLLAAPALEPPPPPTQPLLPEELSARGVGRS
RAEAQKEVDRLKARQSELFELIQLKREVMFIEAHARAWGQACARARGGG*
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