prot_M-pyrifera_M_contig13202.5878.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13202.5878.1
Unique Nameprot_M-pyrifera_M_contig13202.5878.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length176
Homology
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BLAST of mRNA_M-pyrifera_M_contig13202.5878.1 vs. uniprot
Match: D7G9E7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E7_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 6.510e-76
Identity = 120/173 (69.36%), Postives = 139/173 (80.35%), Query Frame = 0 
Query:    1 MSGITRASPHLPSVTMVNVDDLFLVVMVCVLIEVVAGFLKWKACRVSRIEAQLVLQRQLLKTCVNKTDYTSTFVDNSKLRRQLLKVEKDAERLQSAKERDFKSATKTVRVARACVYGVMVVYMWGQPLISFSSDYLWPSTFSHALSGGREAGSVGALSIVVMFVFGLAPSFSP 173
            M+G+  ASPHLPSV  V+VD LFLVVM+C L+EVVAGF+ WK  RV+R EA L+ QRQ L+T V KT+YT+TFV+NSKL+R LLK EKD ER+QSA++R  KS  K VR  R CVYG MVV MWG+PLISFS DYLWPS+FSHALSGGR AGSVGALSIV MF+FGL P  SP
Sbjct:    1 MAGMVGASPHLPSVMAVSVDTLFLVVMMCSLVEVVAGFVMWKTSRVTRTEAALISQRQTLRTGVAKTNYTATFVENSKLKRLLLKAEKDLERIQSARDRRLKSVAKAVRAVRVCVYGSMVVLMWGRPLISFSPDYLWPSSFSHALSGGRAAGSVGALSIVAMFLFGLVPRLSP 173
[Close]
BLAST of mRNA_M-pyrifera_M_contig13202.5878.1 vs. uniprot
Match: A0A835YKR9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR9_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.800e-19
Identity = 60/168 (35.71%), Postives = 88/168 (52.38%), Query Frame = 0 
Query:    8 SPHLPSVTMVNVDDLFLVVMVCVLIEVVAGFLKWKACRVSRIEAQLVLQRQLLKTCVNKTDYTSTFVDNSKLRRQLLKVEKDAERLQSAKERDFKSATKTVRVARACVYGVMVVYMWGQPLISFSSDYLWPSTFSHALSGG----REAGSVGALSIVVMFVFGLAPSF 171
            S  LP+V  +N   L L ++VCV++E+++G     A R ++ E        LLK  + KT+Y   FV+NSKL+RQL+KVEK+ ERL+  +        +  R  R   YG +V   WGQ  I F+  Y+ P     A++GG       G V    +VV+F +GL   F
Sbjct:    4 SAALPAVLAINPVGLILAILVCVIVELISGIAHAMAGRRTQAEVTYSEDVALLKVEIVKTNYPEKFVENSKLQRQLIKVEKELERLRGERAARRTKVQRWTRWLRLAAYGALVAAHWGQTAIRFTPAYVTPLG---AVAGGPLQGTPQGGVSIAGVVVLFWWGLGGRF 168
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13202.5878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9E7_ECTSI6.510e-7669.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YKR9_9STRA5.800e-1935.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..96
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..39
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 22..39
NoneNo IPR availableTMHMMTMhelixcoord: 152..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13202contigM-pyrifera_M_contig13202:1230..5858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13202.5878.1mRNA_M-pyrifera_M_contig13202.5878.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13202 1230..5858 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13202.5878.1 ID=prot_M-pyrifera_M_contig13202.5878.1|Name=mRNA_M-pyrifera_M_contig13202.5878.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
MSGITRASPHLPSVTMVNVDDLFLVVMVCVLIEVVAGFLKWKACRVSRIE
AQLVLQRQLLKTCVNKTDYTSTFVDNSKLRRQLLKVEKDAERLQSAKERD
FKSATKTVRVARACVYGVMVVYMWGQPLISFSSDYLWPSTFSHALSGGRE
AGSVGALSIVVMFVFGLAPSFSPVG*
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