prot_M-pyrifera_M_contig127917.5624.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig127917.5624.1
Unique Name	prot_M-pyrifera_M_contig127917.5624.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	167

Homology

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BLAST of mRNA_M-pyrifera_M_contig127917.5624.1 vs. uniprot
Match: A0A351ENW8_9ACTN (MFS domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351ENW8_9ACTN)

HSP 1 Score: 87.4 bits (215), Expect = 3.110e-17
Identity = 49/163 (30.06%), Postives = 92/163 (56.44%), Query Frame = 0

Query:    7 GLTALIIPVVVIALRTPPSAGLGRGRISLAGLREVPRWKPITLAYVMFGAVAAGYTSFLAEALEEDGGLSRNAVANIYIGLGLSSLIGAPVAGWISDRAGRRRALMAVMMMIITVATTVALVTGPGLALVVVTL--GGMWSSYPALTATYMRDHLEDRAFGAA 167
            G  AL++  +    +  P+  +    +  + ++++PRW+ +T+AY MFG ++AG+ +F+  ALEE G ++ +    ++  +G++ ++ AP AG ISDR GR   L   +++++     + +V G  +A +   L      SS PAL A ++RD L+ R+F  A
Sbjct:  161 GFAALVLVAMFTIAKFAPTERIVARGVDFSIIKQIPRWRQVTMAYAMFGGMSAGFATFIVAALEEHGNVAESNSPIVFSAMGIAGMVAAPFAGAISDRIGRLTVLRTTLLLLVV--ANLCVVAGGQVATIAGALLYSSGASSIPALIAAHVRDSLDSRSFSQA 321

[Close]

BLAST of mRNA_M-pyrifera_M_contig127917.5624.1 vs. uniprot
Match: A0A2E6DLE7_9ACTN (MFS domain-containing protein n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A2E6DLE7_9ACTN)

HSP 1 Score: 65.1 bits (157), Expect = 2.790e-9
Identity = 51/169 (30.18%), Postives = 82/169 (48.52%), Query Frame = 0

Query:    1 VYLVDAGLTALIIPVVVIALRTPPSAGLGRGRISLAGLREVPR---WKPITLAYVMFGAVAAGYTSFLAEALEEDGGLSRNAVANIYIGLGLSSLIGAPVAGWISDRAGRRRALMAVMMMIITVATTVALVTGPGLALVVVTLGGMWSSYPALTATYMRDHLEDRAFGA 166
            ++L++    + I+ V+ + LR   S  L  G    AG+R + R   WK     Y+ F  VAA +  F   +LE D  +SR    +++  +G+  ++GA   G +SDR GR R +  V     T    V +      AL  V  G    + P+LTAT++RD +++  F A
Sbjct:  174 IWLIETFAASAILAVLYVVLRDDVSPRLPLG----AGIRAIKRLQGWKTAVFFYMAFAFVAASWFQFFGLSLENDHNMSREFTTHMWALMGIGGVLGALTFGRLSDRLGRPRTMCIVTAAGATTCLLVLVGEMWAAALAAVIYGTSAMAIPSLTATFVRDQVDEHDFTA 338

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig127917.5624.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig127917.5624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A351ENW8_9ACTN	3.110e-17	30.06	MFS domain-containing protein n=1 Tax=Acidimicrobi...	[more]
A0A2E6DLE7_9ACTN	2.790e-9	30.18	MFS domain-containing protein n=2 Tax=Acidimicrobi...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 42..167 e-value: 1.6E-16 score: 62.2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 102..112
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 29..48
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 70..80
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 49..69
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 139..167
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 81..101
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 113..138
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..28
None	No IPR available	TMHMM	TMhelix		coord: 6..28
None	No IPR available	TMHMM	TMhelix		coord: 122..144
None	No IPR available	TMHMM	TMhelix		coord: 47..69
None	No IPR available	TMHMM	TMhelix		coord: 79..101
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 1..166 e-value: 3.3E-10 score: 39.4
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 98..113
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 43..167 score: 9.57
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 2..164

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig127917	contig	M-pyrifera_M_contig127917:1..501 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig127917.5624.1	mRNA_M-pyrifera_M_contig127917.5624.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig127917 1..501 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig127917.5624.1 ID=prot_M-pyrifera_M_contig127917.5624.1|Name=mRNA_M-pyrifera_M_contig127917.5624.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp
VYLVDAGLTALIIPVVVIALRTPPSAGLGRGRISLAGLREVPRWKPITLA
YVMFGAVAAGYTSFLAEALEEDGGLSRNAVANIYIGLGLSSLIGAPVAGW
ISDRAGRRRALMAVMMMIITVATTVALVTGPGLALVVVTLGGMWSSYPAL
TATYMRDHLEDRAFGAA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom
IPR036259	MFS_trans_sf