prot_M-pyrifera_M_contig127783.5602.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127783.5602.1
Unique Nameprot_M-pyrifera_M_contig127783.5602.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length123
Homology
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: A0A7S1G673_9STRA (Coronin n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G673_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.680e-31
Identity = 52/104 (50.00%), Postives = 78/104 (75.00%), Query Frame = 0
Query:    1 INLAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLGAPMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATLRGHTK 104
            ++L+  +GDH ++  S K+FSV++RGGGG VLV   +K G++  GAP++ GH G V+DT W+PFN +++AT S+D+T K+W IP+GGL E+++E  A LRGH K
Sbjct:   45 LSLSTQTGDHTYVKGSTKFFSVAVRGGGGPVLVLPFEKTGRVAPGAPVITGHHGNVFDTDWNPFNPNMVATVSDDSTCKVWGIPDGGLTENLSEPLADLRGHGK 148          
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: A0A812NV59_9DINO (Coronin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NV59_9DINO)

HSP 1 Score: 123 bits (309), Expect = 6.070e-31
Identity = 55/99 (55.56%), Postives = 78/99 (78.79%), Query Frame = 0
Query:    1 INLAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLGAPMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATL 99
            ++L+  +GDH +I AS ++FSV++RGGGG V+V+ L +PGKI    P LAGHK  V DT+W+PFND+++ TAS+D TVK+W IPEGGL E++TE+A +L
Sbjct:   15 LDLSTTTGDHPYIKASARFFSVAVRGGGGAVIVRRLDQPGKISSSEPKLAGHKAAVTDTEWNPFNDNVLYTASDDATVKIWQIPEGGLTENLTEAAGSL 113          
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: B8C9C3_THAPS (Coronin n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9C3_THAPS)

HSP 1 Score: 121 bits (304), Expect = 3.100e-30
Identity = 63/133 (47.37%), Postives = 87/133 (65.41%), Query Frame = 0
Query:    3 LAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLG-APMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPE------------GGLVEDMTESAATLRGHTKDALLLQFHPVANNVIASS 122
            L+  +GD  +I AS KYF+V++ GGGG+V V    +PG+   G  P L GH G + D +W+PF+D ++AT+SEDTT+K+WNIPE            GG  ED+TES   L GH+K   L++FHP ANNV+AS+
Sbjct:   28 LSTVTGDQQYIKASSKYFAVALFGGGGQVYVGRHDRPGRFQAGHTPTLHGHSGAITDFEWNPFDDSMLATSSEDTTIKIWNIPEEWEPIDGSGSSKGG--EDITESLVDLVGHSKKVSLIRFHPTANNVLAST 158          
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: UPI0015AAA833 (coronin-1A-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AAA833)

HSP 1 Score: 112 bits (281), Expect = 2.120e-29
Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 0
Query:    1 INLAPHSGDHYFIAASPKYFSVSIRG-GGGKVLVQDLKKPGKIPLGAPMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATLRGHTKDALLLQFHPVANNVIASS 122
            I +   S D  F A +PK+ ++ I   GGG  LV  L+K G+I +  P++ GHKG V D  W PFND++IA+ASED  V++W IPEGGL   +TE A  L GH + A ++ +HP ANN++ S+
Sbjct:   28 IKITKSSWDSNFCAVNPKFLAIVIEAAGGGAFLVIPLQKTGRIDVNYPLVTGHKGAVLDIAWCPFNDNVIASASEDGIVRVWCIPEGGLSRTLTEPAVELCGHQRRASIVLWHPSANNILLSA 150          
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: A0A6U0GPC1_9STRA (Coronin n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0GPC1_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.180e-28
Identity = 64/132 (48.48%), Postives = 88/132 (66.67%), Query Frame = 0
Query:    3 LAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLG-APMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPE-------GGLV---EDMTESAATLRGHTKDALLLQFHPVANNVIASSS 123
            L+  +GD  +IAAS KYF++S+ GGGG + V  L +PG+   G  P++ GHKG V D  +SPF+D ++A+ASEDTT+KLW+IPE       GG     E ++ES   L GH K   LL+FHP A+NV+AS+S
Sbjct:   28 LSTVTGDQAYIAASAKYFALSLSGGGGPIGVGRLDRPGRFESGKCPIVQGHKGAVLDLGFSPFDDSMLASASEDTTIKLWSIPENWEPTDEGGNAKAGERLSESLTDLVGHRKKVTLLKFHPTASNVLASTS 159          
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: W7TD57_9STRA (Coronin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD57_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.830e-28
Identity = 57/123 (46.34%), Postives = 77/123 (62.60%), Query Frame = 0
Query:    1 INLAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLGAPMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATLRGHTKDALLLQFHPVANNVIASSS 123
            I L+   G+  +I A+PKYF+V++ GGGG       +  G +P   P+ +GH   V D  +SPF+D LIA+ +EDTTVK+W IPEGGL E + E    LR H +   LL+FHP A NV+AS S
Sbjct:   27 IRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVS 149          
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: A0A7S4JF60_9STRA (Coronin n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JF60_9STRA)

HSP 1 Score: 115 bits (289), Expect = 4.330e-28
Identity = 63/132 (47.73%), Postives = 85/132 (64.39%), Query Frame = 0
Query:    3 LAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLG-APMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIP-------EGGLV---EDMTESAATLRGHTKDALLLQFHPVANNVIASSS 123
            L+  +GD  +I AS KYF+VS+ GGGG ++V  L +PG+   G  P + GH G V D  ++PF+D ++ATASEDTT+KLW+IP       E GL    E++TES   L GH K   LL+FHP A+NV+ S S
Sbjct:   29 LSTVTGDQQYIKASAKYFAVSLFGGGGPLMVGRLDRPGRFKPGECPEIQGHTGSVLDCDFNPFDDSMLATASEDTTIKLWSIPDDWEPTNEKGLAHSGENLTESLVDLTGHRKKVNLLRFHPTASNVLGSCS 160          
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: B7FY56_PHATC (Coronin n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY56_PHATC)

HSP 1 Score: 115 bits (288), Expect = 6.080e-28
Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = 0
Query:    3 LAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLGAPM-LAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVED----------MTESAATLRGHTKDALLLQFHPVANNVIASSS 123
            L+  +GD  +I AS KYF+V + GGGG V+V  L +PG+  +     ++GH G V D  W+PF+D ++ATASEDT +KLWNIP+     D          +TES   L GH+K   LL+FHP ANN + S++
Sbjct:   28 LSTVTGDQQYIKASAKYFAVGMAGGGGPVIVNRLDRPGRFDISTSQYVSGHSGAVLDIDWNPFDDSMMATASEDTNIKLWNIPDDWEPTDDKGNARAGKSLTESLVDLTGHSKKVTLLRFHPTANNTLLSTA 159          
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: UPI001F038813 (LOW QUALITY PROTEIN: coronin-6-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F038813)

HSP 1 Score: 115 bits (287), Expect = 9.830e-28
Identity = 56/114 (49.12%), Postives = 81/114 (71.05%), Query Frame = 0
Query:   12 FIAASPKYFSVSIRG-GGGKVLVQDLKKPGKIPLGAPMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATLRG-HTKDALLLQFHPVANNVIASSS 123
            + A +PK+ ++ +   GGG  LV  L+K G++ L AP +AGHK  V D  WSPFND+LIA++SEDTTVK+W IP+GGL++++TE   TL G H +   LL ++PVA N++ S+S
Sbjct:   38 YCAVNPKFIAIVLESAGGGSFLVLPLEKVGRVDLNAPKVAGHKQDVLDIAWSPFNDNLIASSSEDTTVKIWQIPDGGLLDNITEPLLTLEGVHQRRLXLLAWNPVAENILLSAS 151          
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: A0A7D9D6Q9_PARCT (Coronin (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q9_PARCT)

HSP 1 Score: 111 bits (277), Expect = 2.080e-27
Identity = 56/125 (44.80%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    1 INLAPHSGDHYFIAASPKYFSVSIRG-GGGKVLVQDLKKPGKIPLGAPMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATLRG-HTKDALLLQFHPVANNVIASSS 123
            + ++ +S D  + AA+PK+ ++ +   GGG  LV  L+K G++ L AP +AGHK +V D  W+PF+D++IA++SEDTTVK+W IP+ GLVE++T+   TL G H +   LL ++PVA N++ S+S
Sbjct:   27 MKVSKNSWDAPYCAANPKFIAIVLESAGGGSFLVLPLEKFGRVDLNAPKVAGHKMEVLDIAWNPFDDNIIASSSEDTTVKVWQIPDDGLVENLTKPLLTLEGVHQRRVGLLAWNPVAANILLSAS 151          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1G673_9STRA2.680e-3150.00Coronin n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486... [more]
A0A812NV59_9DINO6.070e-3155.56Coronin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 ... [more]
B8C9C3_THAPS3.100e-3047.37Coronin n=1 Tax=Thalassiosira pseudonana TaxID=351... [more]
UPI0015AAA8332.120e-2945.53coronin-1A-like n=1 Tax=Stegodyphus dumicola TaxID... [more]
A0A6U0GPC1_9STRA1.180e-2848.48Coronin n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]
W7TD57_9STRA1.830e-2846.34Coronin n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
A0A7S4JF60_9STRA4.330e-2847.73Coronin n=1 Tax=Odontella aurita TaxID=265563 RepI... [more]
B7FY56_PHATC6.080e-2843.94Coronin n=3 Tax=Phaeodactylum tricornutum TaxID=28... [more]
UPI001F0388139.830e-2849.12LOW QUALITY PROTEIN: coronin-6-like n=1 Tax=Xenia ... [more]
A0A7D9D6Q9_PARCT2.080e-2744.80Coronin (Fragment) n=2 Tax=Paramuricea clavata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 41..82
e-value: 3.4E-4
score: 29.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 49..91
score: 13.316
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..123
e-value: 9.1E-35
score: 122.2
IPR015048Domain of unknown function DUF1899PFAMPF08953DUF1899coord: 6..41
e-value: 1.4E-5
score: 24.9
IPR015505CoroninPANTHERPTHR10856CORONINcoord: 2..123
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 69..83
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 49..123
score: 14.002
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127783contigM-pyrifera_M_contig127783:2..370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127783.5602.1mRNA_M-pyrifera_M_contig127783.5602.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127783 2..370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127783.5602.1 ID=prot_M-pyrifera_M_contig127783.5602.1|Name=mRNA_M-pyrifera_M_contig127783.5602.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
INLAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLGAPMLA
GHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATLR
GHTKDALLLQFHPVANNVIASSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR015048DUF1899
IPR015505Coronin
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf