mRNA_M-pyrifera_M_contig127783.5602.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig127783.5602.1
Unique NamemRNA_M-pyrifera_M_contig127783.5602.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: A0A7S1G673_9STRA (Coronin n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G673_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.680e-31
Identity = 52/104 (50.00%), Postives = 78/104 (75.00%), Query Frame = 1 
Query:    1 INLAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLGAPMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATLRGHTK 312
            ++L+  +GDH ++  S K+FSV++RGGGG VLV   +K G++  GAP++ GH G V+DT W+PFN +++AT S+D+T K+W IP+GGL E+++E  A LRGH K
Sbjct:   45 LSLSTQTGDHTYVKGSTKFFSVAVRGGGGPVLVLPFEKTGRVAPGAPVITGHHGNVFDTDWNPFNPNMVATVSDDSTCKVWGIPDGGLTENLSEPLADLRGHGK 148
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BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: A0A812NV59_9DINO (Coronin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NV59_9DINO)

HSP 1 Score: 123 bits (309), Expect = 6.070e-31
Identity = 55/99 (55.56%), Postives = 78/99 (78.79%), Query Frame = 1 
Query:    1 INLAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLGAPMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATL 297
            ++L+  +GDH +I AS ++FSV++RGGGG V+V+ L +PGKI    P LAGHK  V DT+W+PFND+++ TAS+D TVK+W IPEGGL E++TE+A +L
Sbjct:   15 LDLSTTTGDHPYIKASARFFSVAVRGGGGAVIVRRLDQPGKISSSEPKLAGHKAAVTDTEWNPFNDNVLYTASDDATVKIWQIPEGGLTENLTEAAGSL 113
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BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: B8C9C3_THAPS (Coronin n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9C3_THAPS)

HSP 1 Score: 121 bits (304), Expect = 3.100e-30
Identity = 63/133 (47.37%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:    7 LAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLG-APMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPE------------GGLVEDMTESAATLRGHTKDALLLQFHPVANNVIASS 366
            L+  +GD  +I AS KYF+V++ GGGG+V V    +PG+   G  P L GH G + D +W+PF+D ++AT+SEDTT+K+WNIPE            GG  ED+TES   L GH+K   L++FHP ANNV+AS+
Sbjct:   28 LSTVTGDQQYIKASSKYFAVALFGGGGQVYVGRHDRPGRFQAGHTPTLHGHSGAITDFEWNPFDDSMLATSSEDTTIKIWNIPEEWEPIDGSGSSKGG--EDITESLVDLVGHSKKVSLIRFHPTANNVLAST 158
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BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: UPI0015AAA833 (coronin-1A-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AAA833)

HSP 1 Score: 112 bits (281), Expect = 2.120e-29
Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 1 
Query:    1 INLAPHSGDHYFIAASPKYFSVSIRG-GGGKVLVQDLKKPGKIPLGAPMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATLRGHTKDALLLQFHPVANNVIASS 366
            I +   S D  F A +PK+ ++ I   GGG  LV  L+K G+I +  P++ GHKG V D  W PFND++IA+ASED  V++W IPEGGL   +TE A  L GH + A ++ +HP ANN++ S+
Sbjct:   28 IKITKSSWDSNFCAVNPKFLAIVIEAAGGGAFLVIPLQKTGRIDVNYPLVTGHKGAVLDIAWCPFNDNVIASASEDGIVRVWCIPEGGLSRTLTEPAVELCGHQRRASIVLWHPSANNILLSA 150
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BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: A0A6U0GPC1_9STRA (Coronin n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0GPC1_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.180e-28
Identity = 64/132 (48.48%), Postives = 88/132 (66.67%), Query Frame = 1 
Query:    7 LAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLG-APMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPE-------GGLV---EDMTESAATLRGHTKDALLLQFHPVANNVIASSS 369
            L+  +GD  +IAAS KYF++S+ GGGG + V  L +PG+   G  P++ GHKG V D  +SPF+D ++A+ASEDTT+KLW+IPE       GG     E ++ES   L GH K   LL+FHP A+NV+AS+S
Sbjct:   28 LSTVTGDQAYIAASAKYFALSLSGGGGPIGVGRLDRPGRFESGKCPIVQGHKGAVLDLGFSPFDDSMLASASEDTTIKLWSIPENWEPTDEGGNAKAGERLSESLTDLVGHRKKVTLLKFHPTASNVLASTS 159
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BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: W7TD57_9STRA (Coronin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD57_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.830e-28
Identity = 57/123 (46.34%), Postives = 77/123 (62.60%), Query Frame = 1 
Query:    1 INLAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLGAPMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATLRGHTKDALLLQFHPVANNVIASSS 369
            I L+   G+  +I A+PKYF+V++ GGGG       +  G +P   P+ +GH   V D  +SPF+D LIA+ +EDTTVK+W IPEGGL E + E    LR H +   LL+FHP A NV+AS S
Sbjct:   27 IRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVS 149
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BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: A0A7S4JF60_9STRA (Coronin n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JF60_9STRA)

HSP 1 Score: 115 bits (289), Expect = 4.330e-28
Identity = 63/132 (47.73%), Postives = 85/132 (64.39%), Query Frame = 1 
Query:    7 LAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLG-APMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIP-------EGGLV---EDMTESAATLRGHTKDALLLQFHPVANNVIASSS 369
            L+  +GD  +I AS KYF+VS+ GGGG ++V  L +PG+   G  P + GH G V D  ++PF+D ++ATASEDTT+KLW+IP       E GL    E++TES   L GH K   LL+FHP A+NV+ S S
Sbjct:   29 LSTVTGDQQYIKASAKYFAVSLFGGGGPLMVGRLDRPGRFKPGECPEIQGHTGSVLDCDFNPFDDSMLATASEDTTIKLWSIPDDWEPTNEKGLAHSGENLTESLVDLTGHRKKVNLLRFHPTASNVLGSCS 160
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BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: B7FY56_PHATC (Coronin n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY56_PHATC)

HSP 1 Score: 115 bits (288), Expect = 6.080e-28
Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = 1 
Query:    7 LAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLGAPM-LAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVED----------MTESAATLRGHTKDALLLQFHPVANNVIASSS 369
            L+  +GD  +I AS KYF+V + GGGG V+V  L +PG+  +     ++GH G V D  W+PF+D ++ATASEDT +KLWNIP+     D          +TES   L GH+K   LL+FHP ANN + S++
Sbjct:   28 LSTVTGDQQYIKASAKYFAVGMAGGGGPVIVNRLDRPGRFDISTSQYVSGHSGAVLDIDWNPFDDSMMATASEDTNIKLWNIPDDWEPTDDKGNARAGKSLTESLVDLTGHSKKVTLLRFHPTANNTLLSTA 159
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BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: UPI001F038813 (LOW QUALITY PROTEIN: coronin-6-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F038813)

HSP 1 Score: 115 bits (287), Expect = 9.830e-28
Identity = 56/114 (49.12%), Postives = 81/114 (71.05%), Query Frame = 1 
Query:   34 FIAASPKYFSVSIRG-GGGKVLVQDLKKPGKIPLGAPMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATLRG-HTKDALLLQFHPVANNVIASSS 369
            + A +PK+ ++ +   GGG  LV  L+K G++ L AP +AGHK  V D  WSPFND+LIA++SEDTTVK+W IP+GGL++++TE   TL G H +   LL ++PVA N++ S+S
Sbjct:   38 YCAVNPKFIAIVLESAGGGSFLVLPLEKVGRVDLNAPKVAGHKQDVLDIAWSPFNDNLIASSSEDTTVKIWQIPDGGLLDNITEPLLTLEGVHQRRLXLLAWNPVAENILLSAS 151
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BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Match: A0A7D9D6Q9_PARCT (Coronin (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q9_PARCT)

HSP 1 Score: 111 bits (277), Expect = 2.080e-27
Identity = 56/125 (44.80%), Postives = 88/125 (70.40%), Query Frame = 1 
Query:    1 INLAPHSGDHYFIAASPKYFSVSIRG-GGGKVLVQDLKKPGKIPLGAPMLAGHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATLRG-HTKDALLLQFHPVANNVIASSS 369
            + ++ +S D  + AA+PK+ ++ +   GGG  LV  L+K G++ L AP +AGHK +V D  W+PF+D++IA++SEDTTVK+W IP+ GLVE++T+   TL G H +   LL ++PVA N++ S+S
Sbjct:   27 MKVSKNSWDAPYCAANPKFIAIVLESAGGGSFLVLPLEKFGRVDLNAPKVAGHKMEVLDIAWNPFDDNIIASSSEDTTVKVWQIPDDGLVENLTKPLLTLEGVHQRRVGLLAWNPVAANILLSAS 151
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127783.5602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1G673_9STRA2.680e-3150.00Coronin n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486... [more]
A0A812NV59_9DINO6.070e-3155.56Coronin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 ... [more]
B8C9C3_THAPS3.100e-3047.37Coronin n=1 Tax=Thalassiosira pseudonana TaxID=351... [more]
UPI0015AAA8332.120e-2945.53coronin-1A-like n=1 Tax=Stegodyphus dumicola TaxID... [more]
A0A6U0GPC1_9STRA1.180e-2848.48Coronin n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]
W7TD57_9STRA1.830e-2846.34Coronin n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
A0A7S4JF60_9STRA4.330e-2847.73Coronin n=1 Tax=Odontella aurita TaxID=265563 RepI... [more]
B7FY56_PHATC6.080e-2843.94Coronin n=3 Tax=Phaeodactylum tricornutum TaxID=28... [more]
UPI001F0388139.830e-2849.12LOW QUALITY PROTEIN: coronin-6-like n=1 Tax=Xenia ... [more]
A0A7D9D6Q9_PARCT2.080e-2744.80Coronin (Fragment) n=2 Tax=Paramuricea clavata Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127783contigM-pyrifera_M_contig127783:2..370 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score120.6
Seed ortholog evalue5.3e-25
Seed eggNOG ortholog35128.Thaps8387
Preferred nameCORO2A
KEGG koko:K13882,ko:K13886,ko:K13887
KEGG Pathwayko04145,ko05152,map04145,map05152
Hectar predicted targeting categoryother localisation
GOsGO:0000147,GO:0000278,GO:0000281,GO:0000910,GO:0001667,GO:0001725,GO:0001755,GO:0001772,GO:0001775,GO:0001776,GO:0001845,GO:0001891,GO:0001894,GO:0001906,GO:0001909,GO:0001932,GO:0001933,GO:0001952,GO:0001953,GO:0002228,GO:0002252,GO:0002260,GO:0002263,GO:0002285,GO:0002323,GO:0002366,GO:0002376,GO:0002443,GO:0002449,GO:0002520,GO:0002521,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003779,GO:0003785,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005826,GO:0005829,GO:0005856,GO:0005884,GO:0005885,GO:0005886,GO:0005901,GO:0005903,GO:0005911,GO:0005937,GO:0005938,GO:0006469,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006887,GO:0006897,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006972,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007033,GO:0007040,GO:0007049,GO:0007154,GO:0007155,GO:0007162,GO:0007165,GO:0007166,GO:0007275,GO:0007525,GO:0007527,GO:0008017,GO:0008022,GO:0008064,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008154,GO:0008284,GO:0008360,GO:0009267,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009620,GO:0009628,GO:0009719,GO:0009888,GO:0009892,GO:0009986,GO:0009987,GO:0009991,GO:0010033,GO:0010324,GO:0010467,GO:0010522,GO:0010563,GO:0010605,GO:0010631,GO:0010632,GO:0010633,GO:0010638,GO:0010639,GO:0010721,GO:0010762,GO:0010769,GO:0010771,GO:0010810,GO:0010812,GO:0010941,GO:0010959,GO:0012505,GO:0012506,GO:0014031,GO:0014032,GO:0014033,GO:0014070,GO:0014910,GO:0014912,GO:0015629,GO:0015631,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016328,GO:0016477,GO:0016482,GO:0016600,GO:0017016,GO:0017022,GO:0017048,GO:0017053,GO:0019220,GO:0019222,GO:0019899,GO:0022402,GO:0022407,GO:0022409,GO:0022411,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0023052,GO:0030001,GO:0030027,GO:0030029,GO:0030030,GO:0030036,GO:0030041,GO:0030042,GO:0030054,GO:0030097,GO:0030098,GO:0030101,GO:0030139,GO:0030154,GO:0030155,GO:0030217,GO:0030334,GO:0030335,GO:0030336,GO:0030424,GO:0030427,GO:0030479,GO:0030587,GO:0030595,GO:0030659,GO:0030666,GO:0030674,GO:0030832,GO:0030833,GO:0030834,GO:0030835,GO:0030838,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031152,GO:0031252,GO:0031267,GO:0031323,GO:0031324,GO:0031334,GO:0031338,GO:0031339,GO:0031344,GO:0031345,GO:0031346,GO:0031399,GO:0031400,GO:0031410,GO:0031529,GO:0031589,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032036,GO:0032101,GO:0032102,GO:0032153,GO:0032155,GO:0032268,GO:0032269,GO:0032271,GO:0032273,GO:0032420,GO:0032421,GO:0032426,GO:0032432,GO:0032501,GO:0032502,GO:0032506,GO:0032535,GO:0032796,GO:0032879,GO:0032940,GO:0032944,GO:0032946,GO:0032956,GO:0032970,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033554,GO:0033673,GO:0034097,GO:0034315,GO:0034316,GO:0034613,GO:0034622,GO:0034762,GO:0034765,GO:0035556,GO:0035767,GO:0035838,GO:0036089,GO:0036119,GO:0036120,GO:0038179,GO:0038180,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0042060,GO:0042102,GO:0042110,GO:0042127,GO:0042129,GO:0042221,GO:0042267,GO:0042325,GO:0042326,GO:0042330,GO:0042493,GO:0042592,GO:0042594,GO:0042641,GO:0042742,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043029,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043086,GO:0043087,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043242,GO:0043244,GO:0043254,GO:0043269,GO:0043299,GO:0043320,GO:0043332,GO:0043519,GO:0043521,GO:0043523,GO:0043524,GO:0043542,GO:0043547,GO:0043548,GO:0043549,GO:0043624,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044093,GO:0044387,GO:0044396,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0044853,GO:0044877,GO:0045055,GO:0045087,GO:0045121,GO:0045184,GO:0045321,GO:0045335,GO:0045472,GO:0045595,GO:0045596,GO:0045785,GO:0045859,GO:0045936,GO:0046649,GO:0046677,GO:0046903,GO:0046907,GO:0046983,GO:0048365,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048731,GO:0048762,GO:0048856,GO:0048863,GO:0048864,GO:0048869,GO:0048870,GO:0048871,GO:0048872,GO:0048873,GO:0050670,GO:0050671,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050832,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0050900,GO:0050918,GO:0050920,GO:0050922,GO:0051015,GO:0051017,GO:0051020,GO:0051049,GO:0051051,GO:0051093,GO:0051094,GO:0051125,GO:0051126,GO:0051127,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051249,GO:0051251,GO:0051258,GO:0051261,GO:0051270,GO:0051271,GO:0051272,GO:0051279,GO:0051282,GO:0051286,GO:0051301,GO:0051336,GO:0051338,GO:0051345,GO:0051348,GO:0051493,GO:0051494,GO:0051495,GO:0051641,GO:0051649,GO:0051666,GO:0051674,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0051893,GO:0051895,GO:0051924,GO:0060090,GO:0060249,GO:0060255,GO:0060284,GO:0060326,GO:0060341,GO:0060485,GO:0060491,GO:0060548,GO:0060627,GO:0061024,GO:0061061,GO:0061502,GO:0061572,GO:0061640,GO:0061645,GO:0061802,GO:0061836,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070528,GO:0070663,GO:0070665,GO:0070670,GO:0070727,GO:0070838,GO:0070848,GO:0070887,GO:0070925,GO:0070938,GO:0071310,GO:0071345,GO:0071353,GO:0071363,GO:0071495,GO:0071496,GO:0071671,GO:0071672,GO:0071704,GO:0071840,GO:0071933,GO:0071944,GO:0072511,GO:0080090,GO:0080171,GO:0090066,GO:0090109,GO:0090130,GO:0090132,GO:0090135,GO:0090382,GO:0090630,GO:0090702,GO:0097327,GO:0097435,GO:0097458,GO:0097517,GO:0097708,GO:0098542,GO:0098588,GO:0098589,GO:0098590,GO:0098630,GO:0098657,GO:0098743,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0098858,GO:0098862,GO:0098927,GO:0099024,GO:0099080,GO:0099081,GO:0099120,GO:0099512,GO:0099513,GO:0099568,GO:0099738,GO:0110053,GO:0120025,GO:0120032,GO:0120035,GO:0120036,GO:0120038,GO:1900024,GO:1900025,GO:1900027,GO:1901214,GO:1901215,GO:1901654,GO:1901700,GO:1901879,GO:1901880,GO:1901888,GO:1901889,GO:1902410,GO:1902463,GO:1902743,GO:1902744,GO:1902745,GO:1902903,GO:1902904,GO:1902905,GO:1903037,GO:1903039,GO:1903047,GO:1903169,GO:1903391,GO:1903392,GO:1903673,GO:1904062,GO:1904643,GO:1905861,GO:1990089,GO:1990090,GO:1990819,GO:2000145,GO:2000146,GO:2000147,GO:2000392,GO:2000393,GO:2000394,GO:2000601
EggNOG free text desc.actin filament binding
EggNOG OGs2XBAK@2836,COG1985@1,KOG0303@2759
COG Functional cat.Z
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Exons1
Model size369
Cds size369
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815792.2649221-CDS-M-pyrifera_M_contig127783:1..3701622815792.2649221-CDS-M-pyrifera_M_contig127783:1..370Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127783 2..370 -
1692277571.7360437-CDS-M-pyrifera_M_contig127783:1..3701692277571.7360437-CDS-M-pyrifera_M_contig127783:1..370Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127783 2..370 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127783.5602.1prot_M-pyrifera_M_contig127783.5602.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig127783 2..370 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig127783.5602.1

>prot_M-pyrifera_M_contig127783.5602.1 ID=prot_M-pyrifera_M_contig127783.5602.1|Name=mRNA_M-pyrifera_M_contig127783.5602.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
INLAPHSGDHYFIAASPKYFSVSIRGGGGKVLVQDLKKPGKIPLGAPMLA
GHKGKVYDTQWSPFNDDLIATASEDTTVKLWNIPEGGLVEDMTESAATLR
GHTKDALLLQFHPVANNVIASSS
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mRNA from alignment at M-pyrifera_M_contig127783:2..370-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig127783.5602.1 ID=mRNA_M-pyrifera_M_contig127783.5602.1|Name=mRNA_M-pyrifera_M_contig127783.5602.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=369bp|location=Sequence derived from alignment at M-pyrifera_M_contig127783:2..370- (Macrocystis pyrifera P11B4 male)
ATCAACCTGGCTCCTCATTCTGGAGATCATTATTTTATCGCTGCGTCTCC
AAAGTACTTTTCCGTGTCAATTCGCGGTGGTGGTGGCAAGGTATTGGTGC
AAGACTTGAAGAAGCCCGGCAAGATCCCACTCGGTGCACCTATGCTTGCA
GGGCACAAGGGCAAGGTGTATGACACGCAATGGAGCCCCTTCAACGACGA
CTTGATTGCGACGGCAAGCGAAGACACAACTGTGAAGTTGTGGAACATTC
CAGAAGGTGGCCTGGTGGAGGACATGACCGAGTCGGCCGCTACGCTGCGT
GGACACACCAAGGATGCCTTGTTGCTTCAATTCCACCCCGTGGCGAACAA
CGTGATTGCCTCTAGCAGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig127783:2..370-

>mRNA_M-pyrifera_M_contig127783.5602.1 ID=mRNA_M-pyrifera_M_contig127783.5602.1|Name=mRNA_M-pyrifera_M_contig127783.5602.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig127783:2..370- (Macrocystis pyrifera P11B4 male)
ATCAACCTGGCTCCTCATTCTGGAGATCATTATTTTATCGCTGCGTCTCC
AAAGTACTTTTCCGTGTCAATTCGCGGTGGTGGTGGCAAGGTATTGGTGC
AAGACTTGAAGAAGCCCGGCAAGATCCCACTCGGTGCACCTATGCTTGCA
GGGCACAAGGGCAAGGTGTATGACACGCAATGGAGCCCCTTCAACGACGA
CTTGATTGCGACGGCAAGCGAAGACACAACTGTGAAGTTGTGGAACATTC
CAGAAGGTGGCCTGGTGGAGGACATGACCGAGTCGGCCGCTACGCTGCGT
GGACACACCAAGGATGCCTTGTTGCTTCAATTCCACCCCGTGGCGAACAA
CGTGATTGCCTCTAGCAGTATCAACCTGGCTCCTCATTCTGGAGATCATT
ATTTTATCGCTGCGTCTCCAAAGTACTTTTCCGTGTCAATTCGCGGTGGT
GGTGGCAAGGTATTGGTGCAAGACTTGAAGAAGCCCGGCAAGATCCCACT
CGGTGCACCTATGCTTGCAGGGCACAAGGGCAAGGTGTATGACACGCAAT
GGAGCCCCTTCAACGACGACTTGATTGCGACGGCAAGCGAAGACACAACT
GTGAAGTTGTGGAACATTCCAGAAGGTGGCCTGGTGGAGGACATGACCGA
GTCGGCCGCTACGCTGCGTGGACACACCAAGGATGCCTTGTTGCTTCAAT
TCCACCCCGTGGCGAACAACGTGATTGCCTCTAGCAGT
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