prot_M-pyrifera_M_contig12773.5586.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12773.5586.1
Unique Nameprot_M-pyrifera_M_contig12773.5586.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length122
Homology
BLAST of mRNA_M-pyrifera_M_contig12773.5586.1 vs. uniprot
Match: D8LRZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ0_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 4.480e-29
Identity = 55/81 (67.90%), Postives = 70/81 (86.42%), Query Frame = 0
Query:    8 PSPSSVRKCLQVMEDALARFPDSSEVLLFFAEVVISMGDFARGLKLLKSSASLDPECPIPYVNAARAYLGMNDLVAARRHL 88
            PSPSS+ KC+QV+E++   FP++ EVL FFAEV+ISMGDF +GL+ L+++ASLDPECP+PYVNAARAYLGMND  AARR +
Sbjct:  761 PSPSSLSKCVQVLEESRELFPENPEVLFFFAEVLISMGDFKKGLEFLQTAASLDPECPVPYVNAARAYLGMNDTKAARRQV 841          
BLAST of mRNA_M-pyrifera_M_contig12773.5586.1 vs. uniprot
Match: A0A835YUV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV6_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.040e-20
Identity = 50/120 (41.67%), Postives = 72/120 (60.00%), Query Frame = 0
Query:   10 PSSVRKCLQVMEDALARFPDSSEVLLFFAEVVISMGDFARGLKLLKSSASLDPECPIPYVNAARAYLGMNDLVAARRHLERGQELDATYP----------GTFMDMGQLLMQESSPAEAL 119
            P  + + L++++DA    PDS EV LF +EV+  +GDFA  L LL ++A+ DP CP+PYVNA RA+ GM DL +ARRHL R  ++ A  P          G ++D GQ+  +     EA+
Sbjct:  914 PYRMDQALRILKDASWTHPDSVEVALFHSEVLTHLGDFAGALALLAAAAAKDPSCPLPYVNAGRAFTGMGDLPSARRHLARAMQVRARAPSQEDVDPLCSGAYLDFGQVETRAGHVQEAM 1033          
BLAST of mRNA_M-pyrifera_M_contig12773.5586.1 vs. uniprot
Match: A0A6S9M461_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M461_HETAK)

HSP 1 Score: 76.6 bits (187), Expect = 1.670e-14
Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 0
Query:   17 LQVMEDALARFPDSSEVLLFFAEVVISMGDFARGLKLLKSSASLDPECPIPYVNAARAYLGMNDLVAARRHLERGQELDATYPGTFMDMGQLLMQESS 114
            L+ +E A    PD+ EVLLF+ E++  +GDF + L L + +A + P CP+P+VNA RAYL +ND  A                  ++D+GQLL+  ++
Sbjct:  136 LRQIERAHRLHPDNVEVLLFYGEMLTQVGDFKKALALFRRAAEVSPRCPLPFVNAGRAYLSLNDHAAXXXXXXXXXXXXXXXXXAYLDLGQLLLNRAA 233          
BLAST of mRNA_M-pyrifera_M_contig12773.5586.1 vs. uniprot
Match: A0A7S2WSB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSB2_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.140e-14
Identity = 43/115 (37.39%), Postives = 61/115 (53.04%), Query Frame = 0
Query:   18 QVMEDALARFPDSSEVLLFFAEVVISMGDFARGLKLLKSSASLDPE-------------CPIPYVNAARAYLGMNDLVAARRHLERGQELDATYPGTFMDMGQLLMQESSPAEAL 119
            +++  A+++ PD  E+LL   E+V   GDF   L+   ++A    E             CP+PYVNA RAYL MN+ V A RHLER +E+D       +D+GQL +Q      AL
Sbjct:  436 RLLRKAVSKHPDQGELLLLHGELVAQGGDFLGALEKFAAAAQGSDEAEVGHVPTALPRGCPLPYVNAGRAYLQMNEPVLAERHLERAKEVDPFCAACHLDLGQLWVQRGDVVRAL 550          
BLAST of mRNA_M-pyrifera_M_contig12773.5586.1 vs. uniprot
Match: A0A7S2CEM9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CEM9_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.140e-7
Identity = 27/67 (40.30%), Postives = 39/67 (58.21%), Query Frame = 0
Query:   53 LLKSSASLDPECPIPYVNAARAYLGMNDLVAARRHLERGQELDATYPGTFMDMGQLLMQESSPAEAL 119
            ++  + +L   CP+PYVNA RAYL MN+ V A  HL    E+D +     +D+GQL +Q     +AL
Sbjct:   27 IVSVATALPAGCPLPYVNAGRAYLQMNEPVLAELHLNHALEVDDSCAACHLDLGQLWLQRGDMEKAL 93          
BLAST of mRNA_M-pyrifera_M_contig12773.5586.1 vs. uniprot
Match: A0A7X1P611_9PROT (PEP-CTERM system TPR-repeat protein PrsT n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1P611_9PROT)

HSP 1 Score: 51.2 bits (121), Expect = 6.060e-5
Identity = 33/114 (28.95%), Postives = 51/114 (44.74%), Query Frame = 0
Query:    5 LKQPSPSSVRKCLQVMEDALARFPDSSEVLLFFAEVVISMGDFARGLKLLKSSASLDPECPIPYVNAARAYLGMNDLVAARRHLERGQELDATYPGTFMDMGQLLMQESSPAEA 118
            L Q +   V      ++ A A   D     +      +    +A+ LK  ++  S  P  P+ Y   A AY+G ND+ AARR LE+   L   Y    +++ QL +QE + A A
Sbjct:  418 LSQLAAGDVDAATAELQSASALDGDRYHADVLLISTHLQRRQYAQALKAARALESKQPSNPMTYNLLAAAYIGSNDIPAARRSLEKSLALQPGYTPAALNLAQLDLQEGNKAAA 531          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12773.5586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LRZ0_ECTSI4.480e-2967.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUV6_9STRA1.040e-2041.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9M461_HETAK1.670e-1436.73Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2WSB2_9STRA2.140e-1437.39Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2CEM9_9STRA1.140e-740.30Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7X1P611_9PROT6.060e-528.95PEP-CTERM system TPR-repeat protein PrsT n=1 Tax=B... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 10..121
e-value: 3.0E-15
score: 57.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 18..120
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..121
score: 13.404

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12773contigM-pyrifera_M_contig12773:7393..8814 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12773.5586.1mRNA_M-pyrifera_M_contig12773.5586.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12773 7393..8814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12773.5586.1 ID=prot_M-pyrifera_M_contig12773.5586.1|Name=mRNA_M-pyrifera_M_contig12773.5586.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=122bp
MSCLLKQPSPSSVRKCLQVMEDALARFPDSSEVLLFFAEVVISMGDFARG
LKLLKSSASLDPECPIPYVNAARAYLGMNDLVAARRHLERGQELDATYPG
TFMDMGQLLMQESSPAEALAM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom