prot_M-pyrifera_M_contig127717.5582.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127717.5582.1
Unique Nameprot_M-pyrifera_M_contig127717.5582.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length142
Homology
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BLAST of mRNA_M-pyrifera_M_contig127717.5582.1 vs. uniprot
Match: A0A6V3BV71_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3BV71_HETAK)

HSP 1 Score: 50.8 bits (120), Expect = 6.520e-5
Identity = 43/146 (29.45%), Postives = 70/146 (47.95%), Query Frame = 0 
Query:    9 LETEDGERVELPAPMAAQCTKVESEAIEDGDDRV-----ISVTHATHATLDSVIQFCTLELEEKMGELPQPLWLAD-----LDALLGSAKAGVVALSTED---LVKLTLAARQLGHDALEKLCVAKFAAMIKDKTSEEINTMFSTE 141
            L T DGE   + +   A+ +++    +ED D+ +     I + +     L  VI+FC L++EE M E+P+P+         +    G+   G+VA    D   L++L LAA+ L    L  L  A    +I +KT +EI  +F  E
Sbjct:   22 LVTSDGESFRI-SKAVARVSELVKNMMEDADETMQTQEEIRLPNLKGKVLAKVIEFCNLQVEEPMAEIPKPIKFGKQVRDVVQPAFGAYVDGMVA--ARDWLLLLQLVLAAQYLDVRPLADLTCAALGLLIMNKTPDEIRELFGVE 164
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127717.5582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6V3BV71_HETAK6.520e-529.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.710.10coord: 4..142
e-value: 1.2E-17
score: 66.2
NoneNo IPR availablePANTHERPTHR11165SKP1coord: 7..140
IPR036296SKP1-like, dimerisation domain superfamilySUPERFAMILY81382Skp1 dimerisation domain-likecoord: 94..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127717contigM-pyrifera_M_contig127717:66..491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127717.5582.1mRNA_M-pyrifera_M_contig127717.5582.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127717 66..491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127717.5582.1 ID=prot_M-pyrifera_M_contig127717.5582.1|Name=mRNA_M-pyrifera_M_contig127717.5582.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp
MSGHGRFMLETEDGERVELPAPMAAQCTKVESEAIEDGDDRVISVTHATH
ATLDSVIQFCTLELEEKMGELPQPLWLADLDALLGSAKAGVVALSTEDLV
KLTLAARQLGHDALEKLCVAKFAAMIKDKTSEEINTMFSTEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036296SKP1-like_dim_sf