prot_M-pyrifera_M_contig12771.5580.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12771.5580.1
Unique Nameprot_M-pyrifera_M_contig12771.5580.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length184
Homology
BLAST of mRNA_M-pyrifera_M_contig12771.5580.1 vs. uniprot
Match: D8LBI3_ECTSI (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI3_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 1.080e-101
Identity = 151/175 (86.29%), Postives = 163/175 (93.14%), Query Frame = 0
Query:    2 MSKVSLYSSPVKDKLLMDCPVPPGAIPPPTLVLDLEGTLLGITYTHKKGWRVAKRPGLDDFLKEMAQLYEIVVFTDSLGGLADEWITKMDPLVAVSQRLYRDGTRYIDGKHVKDLSALNRPLEQVVIIDDNADCISMQPENAIKVKTFSLEDGSDPTADTVLHDLAPFLRALATQ 176
            M K +LYSSPVKDKLL+DCP+PPGA+PPPTLVLDLEGTLLG  YT KKGWRVAKRPGLD FLKEM+QLYEIVVFTDS+GGLADEWIT+MDP   +SQR+YRDGTRYIDGK+VKDLSALNRPLEQ +IIDDNADCISMQPENAIKVK FSLEDGSDPTADT L+DLAPFLRALATQ
Sbjct:  214 MGKWALYSSPVKDKLLLDCPLPPGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLEDGSDPTADTALYDLAPFLRALATQ 388          
BLAST of mRNA_M-pyrifera_M_contig12771.5580.1 vs. uniprot
Match: A0A835YRZ2_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ2_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.890e-48
Identity = 86/183 (46.99%), Postives = 120/183 (65.57%), Query Frame = 0
Query:    8 YSSPVKDKLLMDCP---VPPGAIPPPTLVLDLEGTLLGITYTHKKGWRVAKRPGLDDFLKEMAQLYEIVVFTDSLGGLADEWITKMDPLVA-----------VSQRLYRDGTRYIDGKHVKDLSALNRPLEQVVIIDDNADCISMQPENAIKVKTFSLEDGSDPTADTVLHDLAPFLRALATQ 176
            ++ P  DKLL D P   +PP    PPTLVLDLE TL+ + +  + GWRVA+RPG+++FL+EM+  YEIV+FT +  G A+  +T +DP V+            S RLYRD T + +G HVKDLS +NR ++ V+IIDD  +   +QP+N I++K + ++ G DP ADT L DL PFLRALA +
Sbjct:  137 FTEPSSDKLLPDWPPSELPPDTPCPPTLVLDLENTLVHMDWHRRTGWRVARRPGVEEFLREMSMYYEIVIFTSAHVGSAEPIVTSLDPAVSRARGVEVSSGYTSHRLYRDATLFSNGTHVKDLSKINRDMKHVIIIDDEPEAFQLQPDNGIRIKPYEIKPGEDPHADTALTDLIPFLRALAME 319          
BLAST of mRNA_M-pyrifera_M_contig12771.5580.1 vs. uniprot
Match: A0A7J3D5D1_9ARCH (FCP1 homology domain-containing protein n=1 Tax=Nitrososphaeria archaeon TaxID=2268198 RepID=A0A7J3D5D1_9ARCH)

HSP 1 Score: 156 bits (394), Expect = 6.030e-44
Identity = 82/171 (47.95%), Postives = 113/171 (66.08%), Query Frame = 0
Query:    3 SKVSLYSSPVKDKLLMDCPVPPGAIPPPTLVLDLEGTLLGITYTHKKGWRVAKRPGLDDFLKEMAQLYEIVVFTDSLGGLADEWITKMDPLVAVSQRLYRDGTRYIDGKHVKDLSALNRPLEQVVIIDDNADCISMQPENAIKVKTFSLEDGSDPTADTVLHDLAPFLRAL 173
            S++  Y+ P  D+LL D  +PP A    TLVLDL+  L+   +T  +GWR  KRPG++DFLK+MAQ YE+VV+T  L   AD  + ++DP   +  RLYRD TRY++GKHV+DLS LNR L+QV++I  + D  ++QPENAIK+  ++ E   D    T L DL PFL A+
Sbjct:   68 SEMKKYADPPSDRLLPD--LPPHARHIKTLVLDLDDVLIHSDWTRARGWRTFKRPGVEDFLKDMAQYYELVVYTSQLPTYADPILDRLDPQRLLQYRLYRDSTRYVNGKHVRDLSMLNRDLKQVLLITASPDAYALQPENAIKLDKWTTEKSDD----TTLIDLLPFLEAI 232          
BLAST of mRNA_M-pyrifera_M_contig12771.5580.1 vs. uniprot
Match: A0A3R7KV46_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KV46_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.620e-42
Identity = 89/178 (50.00%), Postives = 118/178 (66.29%), Query Frame = 0
Query:    5 VSLYSSPVKDKLLMDCPVP--PGAIPP-PTLVLDLEGTLLGITYTHKKGWRVAKRPGLDDFLKEMAQLYEIVVFTDSLGGLADEWITKMDPLVAVSQRLYRDGTRYIDGKHVKDLSALNRPLEQVVIIDDNADCISMQPENAIKVKTFSLEDGSDPTADTVLHDLAPFLRALATQVWP 179
            V  ++ P + KLL D P+P  P   PP P LVLDLE TL+   ++ K GWR AKRPG+D+FL+ + Q YEIV+F+ + G  A+E + K+DP       L RD TRY++G HVKDLS+LNR L+QVVI+DD+     +QPENAI VK F+  +G D   D  L DL PFL+ALA++  P
Sbjct:  138 VKPFTDPSRLKLLPDWPIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFSQNYG--AEEIVQKLDPKQCALHILSRDATRYLNGAHVKDLSSLNRDLQQVVILDDDPAAYQLQPENAIPVKPFT--NGRDRD-DHELKDLIPFLKALASERVP 310          
BLAST of mRNA_M-pyrifera_M_contig12771.5580.1 vs. uniprot
Match: M2W7T1_GALSU (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W7T1_GALSU)

HSP 1 Score: 150 bits (380), Expect = 5.400e-41
Identity = 80/179 (44.69%), Postives = 114/179 (63.69%), Query Frame = 0
Query:    3 SKVSLYSSPVKDKLLMDCPVPP--GAIPPPTLVLDLEGTLLGITYTHKKGWRVAKRPGLDDFLKEMAQLYEIVVFTDSLGGLADEWITKMDPLVAVSQRLYRDGTRYIDGKHVKDLSALNRPLEQVVIIDDNADCISMQPENAIKVKTFSLEDGSDPTADTVLHDLAPFLRALATQVWP 179
            SKV  ++ P ++KLL D P+P   G +PP TLVLDL+ TL+  T++   GW+ AKRPG+D FL  M+  YEIVV+T ++ G  +  + K+DP   +S RLYRD T+Y  G H+KDLS LNR L + +IIDD+A+C  +QP+N I++  F+ +       D  L DL PFL  +  +  P
Sbjct:  111 SKVRYFTEPSRNKLLPD-PMPQYAGGLPPRTLVLDLDETLVHSTWSRATGWKTAKRPGVDAFLAYMSSFYEIVVYTSAMPGYGEPILEKLDPNGYISHRLYRDATKYEKGVHLKDLSKLNRDLARTIIIDDDANCFRLQPDNGIRIAPFTGD-----VNDRYLLDLIPFLEYIVREDIP 283          
BLAST of mRNA_M-pyrifera_M_contig12771.5580.1 vs. uniprot
Match: I0YZL4_COCSC (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZL4_COCSC)

HSP 1 Score: 146 bits (368), Expect = 1.040e-40
Identity = 78/168 (46.43%), Postives = 108/168 (64.29%), Query Frame = 0
Query:    4 KVSLYSSPVKDKLLMDCPVPPGAIPPPTLVLDLEGTLLGITYTHKKGWRVAKRPGLDDFLKEMAQLYEIVVFTDSLGGLADEWITKMDPLVAVSQRLYRDGTRYIDGKHVKDLSALNRPLEQVVIIDDNADCISMQPENAIKVKTFSLEDGSDPTADTVLHDLAPFLR 171
            +V  YS P  + LL D P     +   TLVLDL+ TL+   +T  +GWR  KRPG +DFL++MAQ YE+VV+TD L   AD  + ++DP   +  RLYRD T+YI+GKHV++L+ LNR L++V++I  N D  S+Q +NAIK+K + LE     + DT L DL P L 
Sbjct:   14 QVKKYSDPPSEHLLPDLPAHARHVR--TLVLDLDDTLIHSDWTRGRGWRTFKRPGAEDFLRQMAQYYELVVYTDQLPTYADPILDRLDPQRFIQYRLYRDSTQYINGKHVRNLNYLNRDLDKVLLITANEDAYSLQADNAIKLKPWKLE-----SEDTALLDLLPLLE 174          
BLAST of mRNA_M-pyrifera_M_contig12771.5580.1 vs. uniprot
Match: A0A059LE39_9CHLO (Mitochondrial import inner membrane translocase subunit TIM50 (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LE39_9CHLO)

HSP 1 Score: 145 bits (367), Expect = 2.680e-40
Identity = 76/172 (44.19%), Postives = 108/172 (62.79%), Query Frame = 0
Query:    8 YSSPVKDKLLMDCPVPPGAIPPPTLVLDLEGTLLGITYTHKKGWRVAKRPGLDDFLKEMAQLYEIVVFTDSLGGLADEWITKMDPLVAVSQRLYRDGTRYIDGKHVKDLSALNRPLEQVVIIDDNADCISMQPENAIKVKTFSLEDGSDPTADTVLHDLAPFLRALATQVWP 179
            Y+ P  D LL D  +PP A    TLVLDL+G L+   +T ++GWR  KRPG++DFL  MAQ YE+V++T  L   AD  + ++DP   V  RLYRD T+Y+ G+HV+DLS LNR   QV+++  +A   ++QP++AIK++ + L+       DT L DL PFL A+     P
Sbjct:   37 YADPPSDALLPD--LPPAARHVKTLVLDLDGVLVHSDWTRERGWRTFKRPGVEDFLGTMAQYYELVIYTSQLPTYADPILDRLDPQRLVQYRLYRDSTQYVGGRHVRDLSKLNRDPRQVLLLTSDAHAYALQPDSAIKLQPWKLQ-----AQDTTLLDLIPFLEAIVRTAVP 201          
BLAST of mRNA_M-pyrifera_M_contig12771.5580.1 vs. uniprot
Match: A0A8J9SQI8_9CHLO (Mitochondrial import inner membrane translocase subunit TI n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SQI8_9CHLO)

HSP 1 Score: 149 bits (377), Expect = 3.590e-40
Identity = 78/170 (45.88%), Postives = 110/170 (64.71%), Query Frame = 0
Query:    4 KVSLYSSPVKDKLLMDCPVPPGAIPPPTLVLDLEGTLLGITYTHKKGWRVAKRPGLDDFLKEMAQLYEIVVFTDSLGGLADEWITKMDPLVAVSQRLYRDGTRYIDGKHVKDLSALNRPLEQVVIIDDNADCISMQPENAIKVKTFSLEDGSDPTADTVLHDLAPFLRAL 173
            ++  YS P  + LL D  +PP A    TLVLDL+ TL+   +T  +GWR  KRPG +DFL++MAQ YE+VV+TD L   AD  + ++DP   +  RLYRD T+YI+GKHV++L+ LNR LE+V++I  NAD   + P+NA+K+K + L+       DT L DL P L  +
Sbjct:  197 QIKKYSDPPSEHLLPD--LPPHARHVRTLVLDLDDTLIHSDWTRGRGWRTFKRPGAEDFLRQMAQYYELVVYTDQLPTYADPILDRLDPQRFIQYRLYRDSTQYINGKHVRNLNYLNRDLEKVLLITANADAYELHPDNAVKLKPWKLD-----AEDTALLDLLPLLEQI 359          
BLAST of mRNA_M-pyrifera_M_contig12771.5580.1 vs. uniprot
Match: A0A7S1BYC3_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYC3_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.340e-39
Identity = 78/173 (45.09%), Postives = 113/173 (65.32%), Query Frame = 0
Query:    8 YSSPVKDKLLMDCP---VPPGAIPPPTLVLDLEGTLLGITYTHKKGWRVAKRPGLDDFLKEMAQLYEIVVFTDSLGGLADEWITKMDPLVAVSQRLYRDGTRYIDGKHVKDLSALNRPLEQVVIIDDNADCISMQPENAIKVKTFSLEDGSDPTADTVLHDLAPFLRALATQV 177
            ++ P  DKLL D P   VPP    P TLVLDLE TL+  T+  K GWR AKRPG+D FL++MAQ YEIV++T ++ G+A+  I  +D   A+   LYR+ TR+IDG HVKDLS+LNR +++++ ID++   + + P+N I+VK ++  D  + T DT L  + P L  +  +V
Sbjct:  152 FTKPHADKLLPDWPMPNVPPDLPCPHTLVLDLENTLVSSTWDRKHGWRHAKRPGVDQFLRKMAQYYEIVLYTSTIQGVAEPVIQNLDKQQAIMHALYRESTRFIDGVHVKDLSSLNRNVKKIIAIDNDEKALQLHPDNLIRVKPYT--DPRNRTDDT-LEKIMPILIEIVNKV 321          
BLAST of mRNA_M-pyrifera_M_contig12771.5580.1 vs. uniprot
Match: E1ZJ53_CHLVA (Mitochondrial import inner membrane translocase subunit TIM50 (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJ53_CHLVA)

HSP 1 Score: 142 bits (358), Expect = 1.460e-39
Identity = 74/164 (45.12%), Postives = 103/164 (62.80%), Query Frame = 0
Query:    8 YSSPVKDKLLMDCPVPPGAIPPPTLVLDLEGTLLGITYTHKKGWRVAKRPGLDDFLKEMAQLYEIVVFTDSLGGLADEWITKMDPLVAVSQRLYRDGTRYIDGKHVKDLSALNRPLEQVVIIDDNADCISMQPENAIKVKTFSLEDGSDPTADTVLHDLAPFLR 171
            Y+ P  D+LL D  +PP A    TLVLDL+  L+   +T  +GWR  KRPG++DF++ MAQ YE+VV+T  L   AD  + ++DP   +  RLYRD T+Y++GKHV+DLS LNR + QV+ +  + D  ++QPENAIK+             DT+L DL PFL 
Sbjct:   40 YADPPSDRLLPD--LPPNARHIKTLVLDLDDVLVHSDWTRGRGWRTFKRPGVEDFIRSMAQYYELVVYTSQLPTYADPILDRLDPQRMIQYRLYRDSTQYVNGKHVRDLSKLNRDMRQVLFVTADPDAYALQPENAIKLSK------EWKAGDTMLLDLLPFLE 195          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12771.5580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBI3_ECTSI1.080e-10186.29Mitochondrial import inner membrane translocase su... [more]
A0A835YRZ2_9STRA3.890e-4846.99Mitochondrial import inner membrane translocase su... [more]
A0A7J3D5D1_9ARCH6.030e-4447.95FCP1 homology domain-containing protein n=1 Tax=Ni... [more]
A0A3R7KV46_9STRA2.620e-4250.00Mitochondrial import inner membrane translocase su... [more]
M2W7T1_GALSU5.400e-4144.69Mitochondrial import inner membrane translocase su... [more]
I0YZL4_COCSC1.040e-4046.43Mitochondrial import inner membrane translocase su... [more]
A0A059LE39_9CHLO2.680e-4044.19Mitochondrial import inner membrane translocase su... [more]
A0A8J9SQI8_9CHLO3.590e-4045.88Mitochondrial import inner membrane translocase su... [more]
A0A7S1BYC3_9STRA1.340e-3945.09Mitochondrial import inner membrane translocase su... [more]
E1ZJ53_CHLVA1.460e-3945.12Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004274FCP1 homology domainSMARTSM00577forpap2coord: 28..156
e-value: 6.7E-35
score: 131.9
IPR004274FCP1 homology domainPFAMPF03031NIFcoord: 31..174
e-value: 2.9E-39
score: 134.3
IPR004274FCP1 homology domainPROSITEPS50969FCP1coord: 25..173
score: 35.694
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 14..181
e-value: 2.1E-50
score: 172.5
IPR027111Mitochondrial import inner membrane translocase subunit Tim50PANTHERPTHR12210:SF3MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM50coord: 7..176
NoneNo IPR availablePANTHERPTHR12210NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATEDcoord: 7..176
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 21..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12771contigM-pyrifera_M_contig12771:1913..6085 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12771.5580.1mRNA_M-pyrifera_M_contig12771.5580.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12771 1913..6674 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12771.5580.1 ID=prot_M-pyrifera_M_contig12771.5580.1|Name=mRNA_M-pyrifera_M_contig12771.5580.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp
MMSKVSLYSSPVKDKLLMDCPVPPGAIPPPTLVLDLEGTLLGITYTHKKG
WRVAKRPGLDDFLKEMAQLYEIVVFTDSLGGLADEWITKMDPLVAVSQRL
YRDGTRYIDGKHVKDLSALNRPLEQVVIIDDNADCISMQPENAIKVKTFS
LEDGSDPTADTVLHDLAPFLRALATQVWPHTSI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004274FCP1_dom
IPR023214HAD_sf
IPR027111Tim50
IPR036412HAD-like_sf