prot_M-pyrifera_M_contig12756.5557.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12756.5557.1
Unique Nameprot_M-pyrifera_M_contig12756.5557.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length177
Homology
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BLAST of mRNA_M-pyrifera_M_contig12756.5557.1 vs. uniprot
Match: A0A6H5L5T7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5T7_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 8.800e-19
Identity = 76/175 (43.43%), Postives = 96/175 (54.86%), Query Frame = 0 
Query:    5 LPLEHIFATAARVYRRSRLHPAFLDWHASASAIASRQQHHRHAK--AATSIQALVRAHLSRQAAVGHLRKRWPTPERASRTIQRAVRVSQER-RRAMLARDSLNRKREEERXXXEKRVETSRAMAKTKERRDTSASAIQAVWRGVAGRADGEARARRKLLSVLVDLGGGTRRMHR 176
            LPL+HIFATAA VYRRSRL  A   WH+ A A    + HH + +  AA  IQ   R  ++R  A    R R P    ASR IQ   R  + R + A +A    NR+   +R   ++        AK ++RR  +++ IQA WRG AGRA G  RARR L  VL +LGGG  RMHR
Sbjct:   40 LPLDHIFATAAGVYRRSRLRTALSTWHSVAKA----ETHHINYRIEAAEVIQRATRVFIARHTAERRRRVRGPAVLAASRMIQAEFRSRKARVKTADVAVRQQNRQELRKRYWCDE-------TAKDEQRRRDASTVIQAAWRGAAGRAAGLNRARRTLRGVLNELGGGRGRMHR 203
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12756.5557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L5T7_9PHAE8.800e-1943.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 94..114
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 48..65
e-value: 0.0048
score: 16.6
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 46..75
score: 8.261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12756contigM-pyrifera_M_contig12756:1040..1570 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12756.5557.1mRNA_M-pyrifera_M_contig12756.5557.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12756 1040..1570 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12756.5557.1 ID=prot_M-pyrifera_M_contig12756.5557.1|Name=mRNA_M-pyrifera_M_contig12756.5557.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp
MLGRLPLEHIFATAARVYRRSRLHPAFLDWHASASAIASRQQHHRHAKAA
TSIQALVRAHLSRQAAVGHLRKRWPTPERASRTIQRAVRVSQERRRAMLA
RDSLNRKREEERREREKRVETSRAMAKTKERRDTSASAIQAVWRGVAGRA
DGEARARRKLLSVLVDLGGGTRRMHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS