prot_M-pyrifera_M_contig127321.5501.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127321.5501.1
Unique Nameprot_M-pyrifera_M_contig127321.5501.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length150
Homology
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BLAST of mRNA_M-pyrifera_M_contig127321.5501.1 vs. uniprot
Match: A0A7C6DN56_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C6DN56_9CHLR)

HSP 1 Score: 63.2 bits (152), Expect = 7.970e-9
Identity = 53/154 (34.42%), Postives = 78/154 (50.65%), Query Frame = 0 
Query:    2 ERPLPVVWFVLAAVAL----AWGYRGLADSWFLRDDFMWLFDSRIQLQDPIQFLTTRPSGYFRPFANLVFGLEHAFFGLEPAGFYAVNVLIHGWSAFWLAKLVRSFGGSVGFAG--ASALSVCALTAAAPGVVWISGLVSLLAVAMVLPALYFY 149
             RP P  W + A  AL     +G R  A++++L DD+ W+ ++ +  ++PI  L    +G+FRP  NLVF   +   GL+PAG+Y VN+ +H  +A  +A L     G  G A   A  L   A+      V+WI G   L+A A  L  L  Y
Sbjct:    5 HRPKPRRWALAAPAALYAVLVFG-RATANTFWL-DDYGWVRNAILASREPIALLALE-AGFFRPVVNLVFLANYLLSGLDPAGYYWVNIALHVINASLVATLAYRLSGHNGIAAGVAGLLFAGAVGNYGEAVIWICGRTELVATAFGLSTLLLY 155
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127321.5501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7C6DN56_9CHLR7.970e-934.42Uncharacterized protein (Fragment) n=1 Tax=Chlorof... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..96
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 124..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 150..150
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 102..123
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 73..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127321contigM-pyrifera_M_contig127321:4..453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127321.5501.1mRNA_M-pyrifera_M_contig127321.5501.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127321 4..453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127321.5501.1 ID=prot_M-pyrifera_M_contig127321.5501.1|Name=mRNA_M-pyrifera_M_contig127321.5501.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=150bp
MERPLPVVWFVLAAVALAWGYRGLADSWFLRDDFMWLFDSRIQLQDPIQF
LTTRPSGYFRPFANLVFGLEHAFFGLEPAGFYAVNVLIHGWSAFWLAKLV
RSFGGSVGFAGASALSVCALTAAAPGVVWISGLVSLLAVAMVLPALYFYH
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