prot_M-pyrifera_M_contig12680.5389.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12680.5389.1
Unique Nameprot_M-pyrifera_M_contig12680.5389.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length47
Homology
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BLAST of mRNA_M-pyrifera_M_contig12680.5389.1 vs. uniprot
Match: A0A6H5K5N1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5N1_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.280e-11
Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = 0 
Query:    7 GKSDPYVKMKLGREQVMKTDTKKRTLKPRYDETFDLLVYER 47
            GKSDPYV +KLGR Q MKTD K RTL PR+DETFDLLVYER
Sbjct: 1129 GKSDPYVCVKLGRGQEMKTDVKSRTLNPRFDETFDLLVYER 1169
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BLAST of mRNA_M-pyrifera_M_contig12680.5389.1 vs. uniprot
Match: A0A835YTN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN3_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 8.060e-5
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    5 FTGKSDPYVKMKLGREQVMKTDTKKRTLKPRYDETFDLLVYER 47
              GKSDPYV +KLG E+V KT     TL PR+D+ FDLLV+++
Sbjct:  516 IVGKSDPYVVVKLGEEEV-KTKVMNNTLDPRWDQQFDLLVHDK 557
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12680.5389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5N1_9PHAE1.280e-1180.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTN3_9STRA8.060e-555.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 2..47
e-value: 9.5E-13
score: 50.2
IPR000008C2 domainPFAMPF00168C2coord: 6..46
e-value: 4.7E-10
score: 39.7
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 3..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12680contigM-pyrifera_M_contig12680:285..425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12680.5389.1mRNA_M-pyrifera_M_contig12680.5389.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12680 285..425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12680.5389.1 ID=prot_M-pyrifera_M_contig12680.5389.1|Name=mRNA_M-pyrifera_M_contig12680.5389.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=47bp
HSPQFTGKSDPYVKMKLGREQVMKTDTKKRTLKPRYDETFDLLVYER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom