prot_M-pyrifera_M_contig12412.4914.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12412.4914.1
Unique Nameprot_M-pyrifera_M_contig12412.4914.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length74
Homology
BLAST of mRNA_M-pyrifera_M_contig12412.4914.1 vs. uniprot
Match: D7FYY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY7_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 9.510e-30
Identity = 58/69 (84.06%), Postives = 60/69 (86.96%), Query Frame = 0
Query:    4 RNPNLLAVRPTGFGGACNAKSDTMQMSYVIAFTRPLGPVLLGGLFFLLAIPCVEIATGIPREQFLSSII 72
            RNPNLLAVRPTGFGGA NAKSDTMQMSYVIA TRPLGPVLL GL F LAIP VE+ TGI REQ LS+II
Sbjct:  136 RNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEMGTGISREQILSAII 204          
BLAST of mRNA_M-pyrifera_M_contig12412.4914.1 vs. uniprot
Match: A0A7S1UHZ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHZ5_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.840e-17
Identity = 41/71 (57.75%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    1 MVTRNPNLLAVRPTGFGGACNAKSDTMQMSYVIAFTRPLGPVLLGGLFFLLAIPCVEIATGIPREQFLSSI 71
            MV RNPNLLA +P G+GGA  AK DT  +SYV+A TRP+G   L    F LA P +E  TG+PR+QFLS I
Sbjct:  134 MVVRNPNLLATKPDGWGGAGGAKEDTFYLSYVVAATRPIGKPALALGAFALATPFIEGVTGVPRDQFLSII 204          
BLAST of mRNA_M-pyrifera_M_contig12412.4914.1 vs. uniprot
Match: B7FNV7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FNV7_PHATC)

HSP 1 Score: 73.6 bits (179), Expect = 1.660e-14
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 0
Query:    1 MVTRNPNLLAVRPTGFGGACNAKSDTMQMSYVIAFTRPLGPVLLGGLFFLLAIPCVEIATGIPREQFLSSII 72
            MV +NP LLA+ P+G GGA +    TMQ SY++ +TRP GP LL GL FLL  P +E  TGIP +  ++S +
Sbjct:  115 MVQQNPGLLALPPSGAGGADSVTDQTMQFSYLVGYTRPFGPFLLYGLLFLLFDPFLEYLTGIPIKTTITSAL 186          
BLAST of mRNA_M-pyrifera_M_contig12412.4914.1 vs. uniprot
Match: A0A7R9UE42_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE42_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.510e-13
Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 0
Query:   17 GGACNAKSDTMQMSYVIAFTRPLGPVLLGGLFFLLAIPCVEIATGIPREQFLS 69
            GGA  AK DT  MSYVIAFTRPLGPVLL GL   L++P VE  TGIPR + L 
Sbjct:  125 GGATGAKDDTFYMSYVIAFTRPLGPVLLAGLIAALSVPLVEGLTGIPRAELLG 177          
BLAST of mRNA_M-pyrifera_M_contig12412.4914.1 vs. uniprot
Match: A0A7S2MUE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MUE2_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.340e-11
Identity = 34/63 (53.97%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    1 MVTRNPNLLAVRPTGFGGACNAKSDTMQMSYVIAFTRPLGPVLLGGLFFLLAIPCVEIATGIP 63
            MV RNP LLA+ P     A  A   TMQ SY++A TRP GPVLL G+  LL +P +E  TGIP
Sbjct:  158 MVQRNPGLLAIPPAN---AAKADGQTMQFSYIVAATRPAGPVLLPGVLTLLCVPAIEAVTGIP 217          
BLAST of mRNA_M-pyrifera_M_contig12412.4914.1 vs. uniprot
Match: K0RXR5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXR5_THAOC)

HSP 1 Score: 61.2 bits (147), Expect = 7.430e-10
Identity = 32/72 (44.44%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    1 MVTRNPNLLAVRPTGFGGACNAKSDTMQMSYVIAFTRPLGPVLLGGLFFLLAIPCVEIATGIPREQFLSSII 72
            MV RNP LL V P     A    S TMQ+SY+++FTRPLG   L G+  LL IP +E   G+ R + + S++
Sbjct:  107 MVMRNPGLLGVEPKD---AVTVTSSTMQLSYIVSFTRPLGNAGLAGIGSLLLIPVIEGTLGLQRGELIGSLL 175          
BLAST of mRNA_M-pyrifera_M_contig12412.4914.1 vs. uniprot
Match: B5YMT8_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMT8_THAPS)

HSP 1 Score: 60.8 bits (146), Expect = 1.940e-9
Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    1 MVTRNPNLLAVRPTGFGGACNAKSDTMQMSYVIAFTRPLG---PVLLGGLFFLLAIPCVEIATGIPREQFLSSI 71
            MV RNP LL+V+P     A +A   TMQMSYV+ FTRP+G   PVL+ GL   LA+P +E A G+ + + LSS+
Sbjct:  153 MVIRNPGLLSVKPVI---AASADDLTMQMSYVVDFTRPIGAAGPVLILGL---LAVPALESALGVGKGELLSSL 220          
BLAST of mRNA_M-pyrifera_M_contig12412.4914.1 vs. uniprot
Match: A0A7S2K6C2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6C2_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.580e-8
Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    2 VTRNPNLLAVRPTGFGGACNAKSDTMQMSYVIAFTRPLGPVLLGGLFFLLAIPCVEIATGIPREQFLSSIIP 73
            V RNP L++V PTG+GGA  A  +T+ +SYV+  TR  G V L  L FLL  P +E  TG+    F  +I+P
Sbjct:  124 VLRNPALMSVAPTGYGGADGAGQETVVLSYVVDATRDGGQVWLSLLAFLLLTPLLEQVTGV---HFREAILP 192          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12412.4914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FYY7_ECTSI9.510e-3084.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1UHZ5_9STRA1.840e-1757.75Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
B7FNV7_PHATC1.660e-1450.00Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7R9UE42_9STRA1.510e-1366.04Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2MUE2_9STRA1.340e-1153.97Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
K0RXR5_THAOC7.430e-1044.44Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B5YMT8_THAPS1.940e-950.00Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S2K6C2_9STRA1.580e-845.83Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..38
NoneNo IPR availableTMHMMTMhelixcoord: 39..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12412contigM-pyrifera_M_contig12412:2783..3915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12412.4914.1mRNA_M-pyrifera_M_contig12412.4914.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12412 2681..3936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12412.4914.1 ID=prot_M-pyrifera_M_contig12412.4914.1|Name=mRNA_M-pyrifera_M_contig12412.4914.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp
MVTRNPNLLAVRPTGFGGACNAKSDTMQMSYVIAFTRPLGPVLLGGLFFL
LAIPCVEIATGIPREQFLSSIIP*
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