prot_M-pyrifera_M_contig124048.4908.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124048.4908.1
Unique Nameprot_M-pyrifera_M_contig124048.4908.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length34
Homology
BLAST of mRNA_M-pyrifera_M_contig124048.4908.1 vs. uniprot
Match: A0A3S8U919_9RHOB (Methylmalonyl-CoA epimerase n=3 Tax=Rhodobacterales TaxID=204455 RepID=A0A3S8U919_9RHOB)

HSP 1 Score: 53.1 bits (126), Expect = 8.960e-8
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MIGRLNHVAIAVPDIEAAANTYRGSLGATLSAKE 34
            MIGRLNHVAIAVPD+EAAA  YRG+LGAT+ A +
Sbjct:    1 MIGRLNHVAIAVPDLEAAAAQYRGALGATVGAPQ 34          
BLAST of mRNA_M-pyrifera_M_contig124048.4908.1 vs. uniprot
Match: A0A2E3EJ57_9PROT (Methylmalonyl-CoA epimerase n=7 Tax=Tistrella TaxID=171436 RepID=A0A2E3EJ57_9PROT)

HSP 1 Score: 52.8 bits (125), Expect = 1.260e-7
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    1 MIGRLNHVAIAVPDIEAAANTYRGSLGATLSA 32
            MIGRLNHVAI VPDIEAAAN YR + GAT+SA
Sbjct:    1 MIGRLNHVAIVVPDIEAAANLYRNTFGATVSA 32          
BLAST of mRNA_M-pyrifera_M_contig124048.4908.1 vs. uniprot
Match: A0A6N9BDW7_9PROT (Methylmalonyl-CoA epimerase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N9BDW7_9PROT)

HSP 1 Score: 52.4 bits (124), Expect = 1.780e-7
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MIGRLNHVAIAVPDIEAAANTYRGSLGATLSAKE 34
            MIGRLNHVAIAVPD+EA A  YRG+LGA +SA +
Sbjct:    1 MIGRLNHVAIAVPDLEAGARAYRGALGACISAPQ 34          
BLAST of mRNA_M-pyrifera_M_contig124048.4908.1 vs. uniprot
Match: A0A2E8U454_9PROT (Methylmalonyl-CoA epimerase n=2 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E8U454_9PROT)

HSP 1 Score: 52.0 bits (123), Expect = 2.510e-7
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0
Query:    1 MIGRLNHVAIAVPDIEAAANTYRGSLGATLS 31
            MIGRLNHVAIAVPD+EAA  TYR +LGAT+S
Sbjct:    1 MIGRLNHVAIAVPDLEAATTTYRDTLGATVS 31          
BLAST of mRNA_M-pyrifera_M_contig124048.4908.1 vs. uniprot
Match: A0A1G6WCU2_9PROT (Methylmalonyl-CoA epimerase n=2 Tax=Kordiimonas TaxID=288021 RepID=A0A1G6WCU2_9PROT)

HSP 1 Score: 52.0 bits (123), Expect = 2.510e-7
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0
Query:    1 MIGRLNHVAIAVPDIEAAANTYRGSLGATLS 31
            MIGRLNHVAI VPD+EAAA TYR +LGAT+S
Sbjct:    1 MIGRLNHVAIVVPDLEAAARTYRDTLGATVS 31          
BLAST of mRNA_M-pyrifera_M_contig124048.4908.1 vs. uniprot
Match: A0A5M6IMK7_9PROT (Methylmalonyl-CoA epimerase n=1 Tax=Rhodovastum atsumiense TaxID=504468 RepID=A0A5M6IMK7_9PROT)

HSP 1 Score: 52.0 bits (123), Expect = 2.510e-7
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0
Query:    1 MIGRLNHVAIAVPDIEAAANTYRGSLGATLS 31
            M+GRLNHVAIAVPD+EAAA TYR  LGAT+S
Sbjct:    1 MLGRLNHVAIAVPDLEAAARTYREKLGATVS 31          
BLAST of mRNA_M-pyrifera_M_contig124048.4908.1 vs. uniprot
Match: A0A192IIT6_9HYPH (Methylmalonyl-CoA epimerase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IIT6_9HYPH)

HSP 1 Score: 52.0 bits (123), Expect = 2.560e-7
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MIGRLNHVAIAVPDIEAAANTYRGSLGATLSAKE 34
            MIGRLNHVAIAVPD+EAAA TYR +LGA +SA +
Sbjct:    1 MIGRLNHVAIAVPDLEAAAATYRDTLGAKVSAPQ 34          
BLAST of mRNA_M-pyrifera_M_contig124048.4908.1 vs. uniprot
Match: A0A3D9BRV0_9RHOB (Methylmalonyl-CoA epimerase n=4 Tax=Rhodobacterales TaxID=204455 RepID=A0A3D9BRV0_9RHOB)

HSP 1 Score: 51.6 bits (122), Expect = 3.540e-7
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MIGRLNHVAIAVPDIEAAANTYRGSLGATLSAKE 34
            MIGRLNHVAIAVPD+EAAA  YRG+LGA++ A +
Sbjct:    1 MIGRLNHVAIAVPDLEAAAAQYRGALGASVGAPQ 34          
BLAST of mRNA_M-pyrifera_M_contig124048.4908.1 vs. uniprot
Match: A0A4Y6RW57_9HYPH (Methylmalonyl-CoA epimerase n=18 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A4Y6RW57_9HYPH)

HSP 1 Score: 51.6 bits (122), Expect = 3.540e-7
Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MIGRLNHVAIAVPDIEAAANTYRGSLGATLSAKE 34
            MIGRLNHVAIAV DIEAA  TYR +LGA +SAKE
Sbjct:    1 MIGRLNHVAIAVSDIEAATATYRDTLGADVSAKE 34          
BLAST of mRNA_M-pyrifera_M_contig124048.4908.1 vs. uniprot
Match: A0A7X2FWU2_9PROT (Methylmalonyl-CoA epimerase n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FWU2_9PROT)

HSP 1 Score: 51.6 bits (122), Expect = 3.540e-7
Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
Query:    1 MIGRLNHVAIAVPDIEAAANTYRGSLGATLSA 32
            MIGRLNHVAI VPD+EAA+  YRG+LGAT+SA
Sbjct:    1 MIGRLNHVAIVVPDLEAASAIYRGALGATVSA 32          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124048.4908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3S8U919_9RHOB8.960e-876.47Methylmalonyl-CoA epimerase n=3 Tax=Rhodobacterale... [more]
A0A2E3EJ57_9PROT1.260e-781.25Methylmalonyl-CoA epimerase n=7 Tax=Tistrella TaxI... [more]
A0A6N9BDW7_9PROT1.780e-773.53Methylmalonyl-CoA epimerase n=1 Tax=Alphaproteobac... [more]
A0A2E8U454_9PROT2.510e-780.65Methylmalonyl-CoA epimerase n=2 Tax=Magnetovibrio ... [more]
A0A1G6WCU2_9PROT2.510e-780.65Methylmalonyl-CoA epimerase n=2 Tax=Kordiimonas Ta... [more]
A0A5M6IMK7_9PROT2.510e-780.65Methylmalonyl-CoA epimerase n=1 Tax=Rhodovastum at... [more]
A0A192IIT6_9HYPH2.560e-776.47Methylmalonyl-CoA epimerase n=2 Tax=Alphaproteobac... [more]
A0A3D9BRV0_9RHOB3.540e-773.53Methylmalonyl-CoA epimerase n=4 Tax=Rhodobacterale... [more]
A0A4Y6RW57_9HYPH3.540e-779.41Methylmalonyl-CoA epimerase n=18 Tax=Alphaproteoba... [more]
A0A7X2FWU2_9PROT3.540e-778.13Methylmalonyl-CoA epimerase n=1 Tax=Alphaproteobac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004360Glyoxalase/fosfomycin resistance/dioxygenase domainPFAMPF00903Glyoxalasecoord: 4..33
e-value: 8.2E-5
score: 22.8
IPR029068Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseGENE3D3.10.180.10coord: 1..34
e-value: 7.1E-6
score: 28.2
IPR029068Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseSUPERFAMILY54593Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenasecoord: 1..32
IPR037523Vicinal oxygen chelate (VOC) domainPROSITEPS51819VOCcoord: 4..34
score: 10.975

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124048contigM-pyrifera_M_contig124048:419..520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124048.4908.1mRNA_M-pyrifera_M_contig124048.4908.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124048 419..520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124048.4908.1 ID=prot_M-pyrifera_M_contig124048.4908.1|Name=mRNA_M-pyrifera_M_contig124048.4908.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=34bp
MIGRLNHVAIAVPDIEAAANTYRGSLGATLSAKE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004360Glyas_Fos-R_dOase_dom
IPR029068Glyas_Bleomycin-R_OHBP_Dase
IPR037523VOC