prot_M-pyrifera_M_contig12398.4894.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12398.4894.1
Unique Nameprot_M-pyrifera_M_contig12398.4894.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length132
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12398.4894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..98
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 29..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12398contigM-pyrifera_M_contig12398:4937..7363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12398.4894.1mRNA_M-pyrifera_M_contig12398.4894.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12398 2791..7387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12398.4894.1 ID=prot_M-pyrifera_M_contig12398.4894.1|Name=mRNA_M-pyrifera_M_contig12398.4894.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
MPPSRSRSRGNTTPWFEWWTASPDGRETLPNLLFFCFCFLTSTWPVFGSC
LRRKLTAGEMICFLLLSSKGRLIEQSDGTPDGGKEDLLQSWGGRGRLGVF
WWLRLFQFVLFPGILTVGNVDPFPYGLQTIA*
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