prot_M-pyrifera_M_contig1237.4848.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1237.4848.1
Unique Nameprot_M-pyrifera_M_contig1237.4848.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length209
Homology
BLAST of mRNA_M-pyrifera_M_contig1237.4848.1 vs. uniprot
Match: D7FPP9_ECTSI (Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP9_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 9.320e-82
Identity = 140/202 (69.31%), Postives = 158/202 (78.22%), Query Frame = 0
Query:    1 QGLTVDVEGFTRKMADEKMKSGLARTNQKAAGGKPMVLEAEEMDWLSKRGTAATATAGRYTWHHQPTAKA-TLFAGKGEGEDGIGFVRSKSCTADADPKDLQNVGVVLDVSSFYAEGGGQIFDTGELSFEDGSGSLCVKQVTAFGAYVLHVGQARQRIITFSSRLGTVEVGSTVVCKVDYDRRANVAPNHTMTHVLNFALRK 201
            +GL+VDVEGF +KM+DEK KS  AR+NQKAAGGKPM+LEAE+MDWLSKR T AT  +GRYTWH QP AK   LF GKGEGEDG+GFV S S  AD    D Q VGVVLD +SFYAEGGGQI+D GELS  DGSGS  V+QV++FGAY LH+GQ +          GT+ VGS VVCKVDY+RRANVAPNHTMTHVLNFALRK
Sbjct:  458 KGLSVDVEGFDQKMSDEKTKSNQARSNQKAAGGKPMILEAEQMDWLSKRDTEATEASGRYTWHQQPAAKVLALFVGKGEGEDGVGFVPSASAVADE--ADQQTVGVVLDCTSFYAEGGGQIYDIGELSLSDGSGSFAVRQVSSFGAYTLHIGQVKA---------GTLSVGSDVVCKVDYERRANVAPNHTMTHVLNFALRK 648          
BLAST of mRNA_M-pyrifera_M_contig1237.4848.1 vs. uniprot
Match: A0A6H5L0C8_9PHAE (Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C8_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 8.140e-54
Identity = 110/201 (54.73%), Postives = 127/201 (63.18%), Query Frame = 0
Query:    1 QGLTVDVEGFTRKMADEKMKSGLARTNQKAAGGKPMVLEAEEMDWLSKRGTAATATAGRYTWHHQPTAKATLFAGKGEGEDGIGFVRSKSCTADADPKDLQNVGVVLDVSSFYAEGGGQIFDTGELSFEDGSGSLCVKQVTAFGAYVLHVGQARQRIITFSSRLGTVEVGSTVVCKVDYDRRANVAPNHTMTHVLNFALRK 201
            +GL+VDVEGF +KM+             KAAGGKPM+LEAE++                            LF GKGEGEDG+GFV S S   D    D Q VGVVLD +SFYAEGGGQI+D GELS  DGSGS  V+QV+ FGAY LH+GQ    +     + GT+ VGS VVCKVDY+RRANVAPNHTMTHVLNFALRK
Sbjct:  347 KGLSVDVEGFDQKMSXXXXXXXXXXXXXKAAGGKPMILEAEQV--------------------------LALFVGKGEGEDGVGFVPSASAVVDE--ADQQTVGVVLDCTSFYAEGGGQIYDIGELSLSDGSGSFAVRQVSNFGAYTLHIGQYYGAV---EVKAGTLSVGSDVVCKVDYERRANVAPNHTMTHVLNFALRK 516          
BLAST of mRNA_M-pyrifera_M_contig1237.4848.1 vs. uniprot
Match: W7TIB5_9STRA (Alanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIB5_9STRA)

HSP 1 Score: 160 bits (405), Expect = 8.010e-42
Identity = 88/202 (43.56%), Postives = 121/202 (59.90%), Query Frame = 0
Query:    1 QGLTVDVEGFTRKMADEKMKSGLARTNQKAAGGKPMVLEAEEMDWLSKRGTAATATAGRYTWHHQPTAKA-TLFAGKGEGEDGIGFVRSKSCTADADPKDLQNVGVVLDVSSFYAEGGGQIFDTGELSFEDGSGSLCVKQVTAFGAYVLHVGQARQRIITFSSRLGTVEVGSTVVCKVDYDRRANVAPNHTMTHVLNFALRK 201
            +GLTVD  GF   +A++K +S +A   +K  GGK +VLEAE+  WL  RG   T ++ +Y WHH+P+A+   L+ GK      +GFV   +            V V+L+ +SFYAE GGQI DTG ++  DG+ +L V  V ++G YVLH+G             G + VG T  C VDY+RRA +APNHTMTHVLN+ALR+
Sbjct:  464 KGLTVDRAGFETLLAEDKRQSAMAAAAKKEMGGKEIVLEAEQTAWLQSRGVEITDSSLKYVWHHEPSARVMALYKGKA-----VGFVEEVTAEDGV-------VAVILNTTSFYAEQGGQIHDTGVITNLDGTDTLRVDSVQSYGGYVLHIGPLES---------GALRVGDTATCMVDYERRARIAPNHTMTHVLNYALRR 644          
BLAST of mRNA_M-pyrifera_M_contig1237.4848.1 vs. uniprot
Match: A0A7R9U5A7_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5A7_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.130e-40
Identity = 97/206 (47.09%), Postives = 121/206 (58.74%), Query Frame = 0
Query:    1 QGLTVDVEGFTRKMADEKMKSGLARTNQKAAG--GKPMVLEAEEMDWLSKRGTAATATAGRYTWHHQPTAKA-TLFAGKGEGEDGIGFVRSKSCTADADPKDLQNVGVVLDVSSFYAEGGGQIFDTGELSFEDGSGS---LCVKQVTAFGAYVLHVGQARQRIITFSSRLGTVEVGSTVVCKVDYDRRANVAPNHTMTHVLNFALR 200
            Q + +D EGF  KMA+E  KS  A   +KAAG   K M LEAE+  WL+ +G   + T G+Y W+  PT      F G+G G+DGIGF  S S      P D + VG+VLD +SFYAE GGQIFDTG +    G+ +   + V+ V  FG+YVLH+G            +G    GS V C VDY RR  VAPNHTMTHVLN+ALR
Sbjct:  531 QKMAIDKEGFEAKMAEEVEKSHEAEKARKAAGLGSKEMFLEAEQTSWLANQGFGPSETRGKYNWNSTPTVTVQACFLGRGLGKDGIGFADSVS------PGD-EVVGLVLDSTSFYAEAGGQIFDTGVIRGASGAEANAIMRVESVQVFGSYVLHIGVVE---------MGAFTPGSRVTCMVDYARRERVAPNHTMTHVLNYALR 720          
BLAST of mRNA_M-pyrifera_M_contig1237.4848.1 vs. uniprot
Match: A0A835Z4U5_9STRA (Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U5_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.770e-40
Identity = 88/202 (43.56%), Postives = 120/202 (59.41%), Query Frame = 0
Query:    2 GLTVDVEGFTRKMADEKMKSGLARTNQKAAGGKPMVLEAEEMDWLSKRGTAATATAGRYTWHHQPTAKAT-LFAGKGEGEDGIGFVRSKSCTADADPKDLQNVGVVLDVSSFYAEGGGQIFDTGELSFEDGSGSLCVKQVTAFGAYVLHVGQARQRIITFSSRLGTVEVGSTV--VCKVDYDRRANVAPNHTMTHVLNFALR 200
            GLTVD+  +  KM ++K KS  A   ++AAGG  + +EAE+   L+ +G A T +  +YTWHH P+AK   L+AGKG+G  G GFV         +  + + VG++LD + FYAE GGQ++DTG L  ED S  + V  V  +G YVLH G    + +   + +            C VDYDRR+ VAPNHTMTHVLN+ALR
Sbjct:  448 GLTVDMVEYHAKMEEDKAKSAAAEVARRAAGGTALTMEAEQTSALAAKGVAGTESEAKYTWHHTPSAKVVALYAGKGKGALGDGFVE--------EAVEGERVGIILDTTPFYAEQGGQVYDTGSLDAEDLS--VEVVNVQTYGGYVLHTGIVSGKALAVGTTVXXXXXXXXXXXTCSVDYDRRSRVAPNHTMTHVLNYALR 639          
BLAST of mRNA_M-pyrifera_M_contig1237.4848.1 vs. uniprot
Match: A0A7S4GJP2_9EUGL (Alanine--tRNA ligase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GJP2_9EUGL)

HSP 1 Score: 150 bits (380), Expect = 1.850e-38
Identity = 93/201 (46.27%), Postives = 114/201 (56.72%), Query Frame = 0
Query:    1 QGLTVDVEGFTRKMADEKMKSGLARTNQKAAGGKPMVLEAEEMDWLSKRGTAATATAGRYTWHHQPTAKA-TLFAGKGEGEDGIGFVRSKSCTADADPKDLQNVGVVLDVSSFYAEGGGQIFDTGELSFEDGSGSLCVKQVTAFGAYVLHVGQARQRIITFSSRLGTVEVGSTVVCKVDYDRRANVAPNHTMTHVLNFALR 200
            +GL +D EGF +KM +E   S +A   +K AGGK + L AE+   L + G   T    +Y WH  P+A    LF G GEGE G+GFV      ADA       VGVVLD S FY E GGQ+ DTG L    G G++ V+    +G +VLH G         S   G + VG  V C VDY+RRA+VAPNHTMTHVLN ALR
Sbjct:  510 RGLVLDREGFAKKMKEEAEISAIAAQQRKLAGGKDLRLGAEQTAHLQQTGVEVTDAGDKYNWHVTPSATVKALFIGVGEGEGGLGFVD----VADAS---TGPVGVVLDASPFYPEAGGQVADTGRLQ---GPGTMHVENTQIYGGFVLHTG---------SVPTGELRVGDAVQCAVDYERRAHVAPNHTMTHVLNHALR 691          
BLAST of mRNA_M-pyrifera_M_contig1237.4848.1 vs. uniprot
Match: F0Y844_AURAN (Alanine--tRNA ligase n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y844_AURAN)

HSP 1 Score: 146 bits (368), Expect = 7.520e-37
Identity = 89/204 (43.63%), Postives = 117/204 (57.35%), Query Frame = 0
Query:    1 QGLTVDVEGFTRKMADEKMKSGLARTNQKAA--GGKPMVLEAEEMDWLSKRGTAATATAGRYTWHHQPTAKAT-LFAGKGEGEDGIGFVRSKSCTADADPKDLQNVGVVLDVSSFYAEGGGQIFDTGELSFEDGSGSLCVKQVTAFGAYVLHVGQARQRIITFSSRLGTVEVGSTVVCKVDYDRRANVAPNHTMTHVLNFALRK 201
            +G+TVDV G+   + +E+ K+  A   +KAA   G  M   AE+   L+  G   T + G+Y W+ +P AK   L+ GKG G  G G V +       DP      G VLD +SFYAE GGQ++DTG L  +D +  L V+ V  +G YV+HVG          + LG ++VG  V C VDYDRR  VAPNHTMTHVLNFALR+
Sbjct:  482 RGMTVDVAGYHAALKEEQDKNAAALAKRKAARSAGADMTCAAEQTAALAAAGAPKTESEGKYVWNARPAAKVVALYVGKGGGPKGDGLVDA------VDPSKHAVAGAVLDATSFYAEMGGQVYDTGAL-LKDDAKILDVEDVQVYGGYVVHVG----------APLGPLKVGDDVACAVDYDRRVRVAPNHTMTHVLNFALRE 668          
BLAST of mRNA_M-pyrifera_M_contig1237.4848.1 vs. uniprot
Match: A0A7S1CUN9_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CUN9_CYCTE)

HSP 1 Score: 136 bits (342), Expect = 1.560e-36
Identity = 86/203 (42.36%), Postives = 111/203 (54.68%), Query Frame = 0
Query:    3 LTVDVEGFTRKMADEKMKSGLA-RTNQKAAGGKPMVLEAEEMDWLSKRGTAATATAGRYTWHHQP---TAKATLFAGKGEGEDGIGFVRSKSCTADADPKDLQNVGVVLDVSSFYAEGGGQIFDTGELSFEDGSGSLCVKQVTAFGAYVLHVGQARQRIITFSSRLGTVEVGSTVVCKVDYDRRANVAPNHTMTHVLNFALRK 201
            L +D EGF  KM  E+  S  A +     + GK M L AE+   L  +G   T    +Y W       TAKA LF G+ E ED IGFV S S        +   VG++LD ++FY E GGQ+FDTG +    G  +L V+ V  +G +VLHVG   +         GT  VG + VCKVDYDRR  +A NHTMTH+LN+AL+K
Sbjct:   26 LNIDKEGFEAKMKQEQELSAAAHQAKMSGSSGKDMRLVAEQTAALVGKGVEPTNDEPKYNWDADLEGCTAKA-LFIGRNETEDKIGFVDSMS-------SENGTVGIILDKTAFYGESGGQVFDTGAIVSSSGGATLNVENVQVYGQFVLHVGTIAEG--------GTFTVGDSCVCKVDYDRRRPIASNHTMTHILNYALKK 212          
BLAST of mRNA_M-pyrifera_M_contig1237.4848.1 vs. uniprot
Match: A0A7S4ME88_9STRA (Alanine--tRNA ligase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ME88_9STRA)

HSP 1 Score: 144 bits (362), Expect = 4.730e-36
Identity = 89/202 (44.06%), Postives = 117/202 (57.92%), Query Frame = 0
Query:    2 GLTVDVEGFTRKMADEKMKSGLA-RTNQKAAGGKPMVLEAEEMDWLSKRGTAATATAGRYTWHH--QPTAKATLFAGKGEGEDGIGFVRSKSCTADADPKDLQNVGVVLDVSSFYAEGGGQIFDTGELSFEDGSGSLCVKQVTAFGAYVLHVGQARQRIITFSSRLGTVEVGSTVVCKVDYDRRANVAPNHTMTHVLNFALR 200
            GLT+D EGF  KM DE+ KS  A R      GGK M L AE+  +L  +G  AT    +Y W+   +    A LF G+GE EDGIGF       AD+   +   VG++LD +SFYAE GGQ +DTG +    G+  + +  V ++G +VLHVGQ  +         GTV +G  ++C VDY RR  +A NHTMTHVLN+ALR
Sbjct:  439 GLTLDREGFDAKMKDEQDKSAEAHRLKMMGKGGKDMRLVAEQTAYLVNKGVDATDDEAKYVWNKDLEGCKAAALFVGRGETEDGIGF-------ADSITGENGAVGLILDKTSFYAEAGGQTYDTGVIKTAGGA-VVRIDNVQSYGQFVLHVGQVTE---------GTVALGEELICSVDYVRRTPIASNHTMTHVLNYALR 623          
BLAST of mRNA_M-pyrifera_M_contig1237.4848.1 vs. uniprot
Match: A0A7S1ZG71_TRICV (Alanine--tRNA ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZG71_TRICV)

HSP 1 Score: 143 bits (361), Expect = 6.540e-36
Identity = 88/202 (43.56%), Postives = 117/202 (57.92%), Query Frame = 0
Query:    2 GLTVDVEGFTRKMADEKMKSGLARTNQKAAG-GKPMVLEAEEMDWLSKRGTAATATAGRYTWHHQ--PTAKATLFAGKGEGEDGIGFVRSKSCTADADPKDLQNVGVVLDVSSFYAEGGGQIFDTGELSFEDGSGSLCVKQVTAFGAYVLHVGQARQRIITFSSRLGTVEVGSTVVCKVDYDRRANVAPNHTMTHVLNFALR 200
            GLT+D EGF  KM +E+ KS  A   +   G GK M L AE+   L   G  AT    +Y W+ +    A   LF G+GE EDG+GFV S +  +         VG+VLD ++FYAE GGQI+DTG +    G G + V  V A+G +VLH+G+  +         GTV +G  ++C VDY RR+ +A NHTMTHVLNFAL+
Sbjct:  513 GLTLDREGFDAKMKEEQDKSAEAHRKKMMGGSGKDMRLVAEQTARLVSDGVEATDDEAKYMWNQELGGCAAKALFVGRGETEDGVGFVPSINAESGM-------VGLVLDKTAFYAEAGGQIYDTGSIK-TSGGGVVRVDNVQAYGQFVLHIGEVTE---------GTVNLGDELICCVDYKRRSPIAANHTMTHVLNFALK 697          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1237.4848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPP9_ECTSI9.320e-8269.31Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5L0C8_9PHAE8.140e-5454.73Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
W7TIB5_9STRA8.010e-4243.56Alanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7R9U5A7_9STRA1.130e-4047.09Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococ... [more]
A0A835Z4U5_9STRA1.770e-4043.56Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S4GJP2_9EUGL1.850e-3846.27Alanine--tRNA ligase n=1 Tax=Eutreptiella gymnasti... [more]
F0Y844_AURAN7.520e-3743.63Alanine--tRNA ligase n=2 Tax=Aureococcus anophagef... [more]
A0A7S1CUN9_CYCTE1.560e-3642.36Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S4ME88_9STRA4.730e-3644.06Alanine--tRNA ligase n=2 Tax=Odontella aurita TaxI... [more]
A0A7S1ZG71_TRICV6.540e-3643.56Alanine--tRNA ligase n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.130coord: 87..165
e-value: 3.5E-8
score: 35.4
NoneNo IPR availablePANTHERPTHR11777ALANYL-TRNA SYNTHETASEcoord: 1..201
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminalPFAMPF01411tRNA-synt_2ccoord: 1..180
e-value: 1.8E-13
score: 49.9
IPR018165Alanyl-tRNA synthetase, class IIc, core domainPROSITEPS50860AA_TRNA_LIGASE_II_ALAcoord: 1..208
score: 15.186
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 99..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1237contigM-pyrifera_M_contig1237:117..9317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1237.4848.1mRNA_M-pyrifera_M_contig1237.4848.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1237 117..9317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1237.4848.1 ID=prot_M-pyrifera_M_contig1237.4848.1|Name=mRNA_M-pyrifera_M_contig1237.4848.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp
QGLTVDVEGFTRKMADEKMKSGLARTNQKAAGGKPMVLEAEEMDWLSKRG
TAATATAGRYTWHHQPTAKATLFAGKGEGEDGIGFVRSKSCTADADPKDL
QNVGVVLDVSSFYAEGGGQIFDTGELSFEDGSGSLCVKQVTAFGAYVLHV
GQARQRIITFSSRLGTVEVGSTVVCKVDYDRRANVAPNHTMTHVLNFALR
KARTWYIT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018164Ala-tRNA-synth_IIc_N
IPR018165Ala-tRNA-synth_IIc_core
IPR009000Transl_B-barrel_sf