prot_M-pyrifera_M_contig123634.4841.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig123634.4841.1
Unique Nameprot_M-pyrifera_M_contig123634.4841.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length174
Homology
BLAST of mRNA_M-pyrifera_M_contig123634.4841.1 vs. uniprot
Match: A0A2E0RSR3_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RSR3_9ACTN)

HSP 1 Score: 271 bits (692), Expect = 5.120e-88
Identity = 138/174 (79.31%), Postives = 153/174 (87.93%), Query Frame = 0
Query:    1 RDLPGPLLIVGCIVIAGAVGAVWSGISAVLANRFNTSVVISSLLLTYIAAAAMQWLIRVGIRDPDSFVPASRVIGDASLPTVPVINTHFGFVIAVLVVPVAAAVMARTRFGYRVDVIGHNPIALQANEVPTGRMLFTVLGLVGLLSGIAGYIQVAGVTNRINGEFSLDYGFTAI 174
            RDLPG +LI  CIVIAG  G VWSGISA L+NRFNTSVVISSLLLTYIA A MQWLIRVGI+DPD FVP SRVIG+A LPTVP++NTH GFVIAV +VP+AA +M+RTRFGYRVDVIGHNPIAL+ANEV TG+MLF VLG+VG LSG+AGYIQVAGVT RIN +FSL YGFTAI
Sbjct:  125 RDLPGVVLIPSCIVIAGLTGMVWSGISAELSNRFNTSVVISSLLLTYIATAVMQWLIRVGIKDPDGFVPQSRVIGNAGLPTVPLLNTHLGFVIAVALVPIAAVMMSRTRFGYRVDVIGHNPIALRANEVATGKMLFAVLGIVGFLSGLAGYIQVAGVTTRINAQFSLGYGFTAI 298          
BLAST of mRNA_M-pyrifera_M_contig123634.4841.1 vs. uniprot
Match: A0A1Q9SST9_9PSEU (Uncharacterized protein n=1 Tax=Pseudonocardia sp. CNS-139 TaxID=1904968 RepID=A0A1Q9SST9_9PSEU)

HSP 1 Score: 184 bits (467), Expect = 2.100e-55
Identity = 95/174 (54.60%), Postives = 121/174 (69.54%), Query Frame = 0
Query:    1 RDLPGPLLIVGCIVIAGAVGAVWSGISAVLANRFNTSVVISSLLLTYIAAAAMQWLIRVGIRDPDSFVPASRVIGDASLPTVPVINTHFGFVIAVLVVPVAAAVMARTRFGYRVDVIGHNPIALQANEVPTGRMLFTVLGLVGLLSGIAGYIQVAGVTNRINGEFSLDYGFTAI 174
            RDLPGPLL+V  +V+A   G  WSG++A L  RF TSVVI+SLLL YIAAA + W +RVGIRDP++F P SR IG A+LP +P    H GF  A+L VPV AAV+ RTRFG+RV+V+G +P  L A E       F VL   G  +G+AG+++VAGVT R+   F++ YGFTAI
Sbjct:   41 RDLPGPLLVVTALVVAVVAGGAWSGLTAWLLARFGTSVVITSLLLNYIAAAVLAWAVRVGIRDPEAFTPQSRQIGAAALPDIPGTTIHLGFFFALLAVPVLAAVLRRTRFGFRVEVLGASPDVLAATEARPAYTRFWVLAAAGAFAGLAGFVEVAGVTGRMTQAFAVGYGFTAI 214          
BLAST of mRNA_M-pyrifera_M_contig123634.4841.1 vs. uniprot
Match: UPI000E354C80 (ABC transporter permease n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E354C80)

HSP 1 Score: 181 bits (460), Expect = 4.540e-53
Identity = 95/171 (55.56%), Postives = 123/171 (71.93%), Query Frame = 0
Query:    4 PGPLLIVGCIVIAGAVGAVWSGISAVLANRFNTSVVISSLLLTYIAAAAMQWLIRVGIRDPDSFVPASRVIGDASLPTVPVINTHFGFVIAVLVVPVAAAVMARTRFGYRVDVIGHNPIALQANEVPTGRMLFTVLGLVGLLSGIAGYIQVAGVTNRINGEFSLDYGFTAI 174
            PGPLL+V    +  A GAVWSG+S  L +RF TSVVISSLLL Y+ ++ + W IRVGIRDPD FVP SR +G A+L  VP ++TH G +IA   V VAA +MARTR+GY VD+ GHNP  L A E+P  R+++ VL + G ++G+AG +QVAGV+ R+N   S+ YGFTAI
Sbjct:  129 PGPLLVVVGAGVGAACGAVWSGLSGWLLDRFGTSVVISSLLLNYVGSSILAWAIRVGIRDPDGFVPQSREVGGATLADVPGLDTHAGVLIAAGAVVVAAVLMARTRWGYLVDIHGHNPDVLDAQEMPRRRLVYAVLLVCGAMAGLAGIVQVAGVSGRLNASSSVGYGFTAI 299          
BLAST of mRNA_M-pyrifera_M_contig123634.4841.1 vs. uniprot
Match: A0A1Q9SA90_9PSEU (Uncharacterized protein n=5 Tax=Pseudonocardia TaxID=1847 RepID=A0A1Q9SA90_9PSEU)

HSP 1 Score: 180 bits (457), Expect = 1.150e-52
Identity = 93/172 (54.07%), Postives = 120/172 (69.77%), Query Frame = 0
Query:    3 LPGPLLIVGCIVIAGAVGAVWSGISAVLANRFNTSVVISSLLLTYIAAAAMQWLIRVGIRDPDSFVPASRVIGDASLPTVPVINTHFGFVIAVLVVPVAAAVMARTRFGYRVDVIGHNPIALQANEVPTGRMLFTVLGLVGLLSGIAGYIQVAGVTNRINGEFSLDYGFTAI 174
            LPG LL+   +V+A A GA W+GI+A +  RF  SVVI+SLLL Y+AAA + W +RVGIRDP SF P S  IGDA+LP +P    H GFV+A+L VP  AAV+ R+RFG+RV+V+G NP  L  NE    R+ F VL L G  +G+AG+++VAGVT R+   F+  YGFTAI
Sbjct:  125 LPGVLLLFSGLVVAVATGAAWAGITAWMLARFGASVVITSLLLNYVAAAGLAWAVRVGIRDPGSFTPQSGPIGDAALPDIPGTTIHLGFVLALLAVPALAAVLTRSRFGFRVEVLGANPEVLAVNEARPERVRFAVLALAGAFAGLAGFVEVAGVTERMTPAFATGYGFTAI 296          
BLAST of mRNA_M-pyrifera_M_contig123634.4841.1 vs. uniprot
Match: A0A4R7J9K3_9ACTN (Simple sugar transport system permease protein n=1 Tax=Naumannella halotolerans TaxID=993414 RepID=A0A4R7J9K3_9ACTN)

HSP 1 Score: 169 bits (427), Expect = 5.250e-48
Identity = 95/174 (54.60%), Postives = 118/174 (67.82%), Query Frame = 0
Query:    1 RDLPGPLLIVGCIVIAGAVGAVWSGISAVLANRFNTSVVISSLLLTYIAAAAMQWLIRVGIRDPDSFVPASRVIGDASLPTVPVINTHFGFVIAVLVVPVAAAVMARTRFGYRVDVIGHNPIALQANEVPTGRMLFTVLGLVGLLSGIAGYIQVAGVTNRINGEFSLDYGFTAI 174
            + LPGP L+V  +V+AG  GA WS +SA L  +F  SVVI+SLLL Y+A A + W IRVGI DP ++ P SR IG A LP+ P  N H G +IAVL V V AA +AR R G R+DV+G +P  LQ  E+ T R    VLGL GLL+GIAG+++VAGV+ RI G FS   GFTAI
Sbjct:  138 QSLPGPALVVLGLVVAGVSGATWSILSAWLNIQFGASVVITSLLLNYVAQAIVAWSIRVGIPDPAAYTPQSRPIGAAELPSFPGTNLHLGALIAVLAVLVVAAALARGRLGLRIDVMGSSPEVLQTQEISTRRYAVLVLGLAGLLAGIAGFVEVAGVSGRIAGGFSGAVGFTAI 311          
BLAST of mRNA_M-pyrifera_M_contig123634.4841.1 vs. uniprot
Match: UPI001E3773AD (ABC transporter permease n=1 Tax=Pseudonocardia sp. TRM90224 TaxID=2812678 RepID=UPI001E3773AD)

HSP 1 Score: 167 bits (424), Expect = 1.030e-47
Identity = 87/172 (50.58%), Postives = 116/172 (67.44%), Query Frame = 0
Query:    3 LPGPLLIVGCIVIAGAVGAVWSGISAVLANRFNTSVVISSLLLTYIAAAAMQWLIRVGIRDPDSFVPASRVIGDASLPTVPVINTHFGFVIAVLVVPVAAAVMARTRFGYRVDVIGHNPIALQANEVPTGRMLFTVLGLVGLLSGIAGYIQVAGVTNRINGEFSLDYGFTAI 174
            LPGPLL++  ++ A   GA  + ++  L +RF  SVVI+SLLL Y+AAAA+ W +RVGIRDP SF P SR +G A LPT+P    H GF+ A++ VPV A V+ RTRFG RV+V+G NP  L  NE     +   VL + G L+G AG+++VAGVT+R+   F+  YGFTAI
Sbjct:  127 LPGPLLVIVALLAAVLAGAALAALTGWLQDRFGASVVITSLLLNYVAAAALAWAVRVGIRDPGSFTPQSRAVGAAGLPTLPGTGLHLGFLFALIAVPVLAVVLRRTRFGLRVEVLGANPDVLAVNEARPAAVRLAVLIVAGSLAGFAGFVEVAGVTDRLTPAFATGYGFTAI 298          
BLAST of mRNA_M-pyrifera_M_contig123634.4841.1 vs. uniprot
Match: UPI00101D55E1 (ABC transporter permease n=1 Tax=Phytoactinopolyspora endophytica TaxID=1642495 RepID=UPI00101D55E1)

HSP 1 Score: 165 bits (417), Expect = 1.280e-46
Identity = 93/173 (53.76%), Postives = 116/173 (67.05%), Query Frame = 0
Query:    3 LPGPLLIVGCIVIAG-AVGAVWSGISAVLANRFNTSVVISSLLLTYIAAAAMQWLIRVGIRDPDSFVPASRVIGDASLPTVPVINTHFGFVIAVLVVPVAAAVMARTRFGYRVDVIGHNPIALQANEVPTGRMLFTVLGLVGLLSGIAGYIQVAGVTNRINGEFSLDYGFTAI 174
            LP  LL VG   IAG A GAVWSG+SAV+ NRF  SVVI+S+LL Y+A A + W +RVG+R+ +SF P S  IGDA+LP +     H G V+A+L VPV A  + RTRFG R+ V+G +P  L+ NEV TGRM   VL   G L+G+AGY+QVAGV   +   FS   GFTAI
Sbjct:  132 LPAALL-VGTAAIAGMAGGAVWSGLSAVMLNRFKASVVITSILLNYLAIALLTWAVRVGVRNDESFTPKSLPIGDAALPDIGGSGPHAGVVVALLAVPVVAVALNRTRFGLRIAVMGSSPGVLRTNEVSTGRMTLGVLACAGALAGLAGYVQVAGVATTMTPAFSTGLGFTAI 303          
BLAST of mRNA_M-pyrifera_M_contig123634.4841.1 vs. uniprot
Match: A0A349B0D9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B0D9_9ACTN)

HSP 1 Score: 160 bits (404), Expect = 1.180e-44
Identity = 86/173 (49.71%), Postives = 114/173 (65.90%), Query Frame = 0
Query:    2 DLPGPLLIVGCIVIAGAVGAVWSGISAVLANRFNTSVVISSLLLTYIAAAAMQWLIRVGIRDPDSFVPASRVIGDASLPTVPVINTHFGFVIAVLVVPVAAAVMARTRFGYRVDVIGHNPIALQANEVPTGRMLFTVLGLVGLLSGIAGYIQVAGVTNRINGEFSLDYGFTAI 174
             LPGP+LIV  I +    GA W+G++A   NRF  SVVIS+LLL Y+A A + + +RV ++DP   +P SRV+G A LP +  +  H G ++A +V PVA  V+ RTRFG+RV  +GHN  AL+ANE+P  R+   VL L G L+GIAGYIQVAGV  R+    S  +GF AI
Sbjct:  133 SLPGPVLIVTSIAMGAVAGAAWAGLAAWFGNRFGASVVISTLLLVYVAEALLAYAVRVPLKDPAGILPQSRVLGGAELPVIGDVRLHVGVLLAAVVAPVAWLVLQRTRFGFRVRAMGHNSEALEANELPAARIATRVLLLSGGLAGIAGYIQVAGVQGRLIQGLSPGFGFAAI 305          
BLAST of mRNA_M-pyrifera_M_contig123634.4841.1 vs. uniprot
Match: A0A6V8L3A2_9ACTN (ABC transporter permease n=1 Tax=Phytohabitans rumicis TaxID=1076125 RepID=A0A6V8L3A2_9ACTN)

HSP 1 Score: 159 bits (401), Expect = 2.460e-44
Identity = 84/174 (48.28%), Postives = 111/174 (63.79%), Query Frame = 0
Query:    1 RDLPGPLLIVGCIVIAGAVGAVWSGISAVLANRFNTSVVISSLLLTYIAAAAMQWLIRVGIRDPDSFVPASRVIGDASLPTVPVINTHFGFVIAVLVVPVAAAVMARTRFGYRVDVIGHNPIALQANEVPTGRMLFTVLGLVGLLSGIAGYIQVAGVTNRINGEFSLDYGFTAI 174
            RD PG  L+V  +++A   G  W+ ++A L +RF         LL Y+A A + W +RVGIRDP SF P SR IG A+LP +P ++ H GF++AV  VP+  AV+ARTRFG+RVDV+G N   L ANE    R+   VL + G  +G AGYIQVAGV+ R+   F+  YGFTAI
Sbjct:  121 RDWPGAPLVVTSLLVAVLAGGAWAAVTAGLNSRFXXXXXXXXXLLNYVATALLAWAVRVGIRDPGSFTPQSREIGAAALPVLPGLDVHLGFLLAVATVPLLGAVLARTRFGFRVDVMGANAEVLGANEARPARVTLAVLLVCGAFAGAAGYIQVAGVSGRLTPGFATGYGFTAI 294          
BLAST of mRNA_M-pyrifera_M_contig123634.4841.1 vs. uniprot
Match: A0A6B1EI93_9ACTN (ABC transporter permease n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EI93_9ACTN)

HSP 1 Score: 143 bits (361), Expect = 1.830e-38
Identity = 77/173 (44.51%), Postives = 116/173 (67.05%), Query Frame = 0
Query:    2 DLPGPLLIVGCIVIAGAVGAVWSGISAVLANRFNTSVVISSLLLTYIAAAAMQWLIRVGIRDPDSFVPASRVIGDASLPTVPVINTHFGFVIAVLVVPVAAAVMARTRFGYRVDVIGHNPIALQANEVPTGRMLFTVLGLVGLLSGIAGYIQVAGVTNRINGEFSLDYGFTAI 174
            DLP  +LIV  +  A   GA+W G++ VLANRF  S+VIS+L+L++I  + +QW +R GIRDP+S+   SR I  A+LP+     TH GF+ A+++VP+A  ++ R R+G+R+D +GHNP  L ANE  + R+  +VL + G L+G+AG ++  GV  R+  E S+ YG+ AI
Sbjct:  112 DLPRVVLIVIGLGAAIVAGALWGGLAGVLANRFGASIVISTLMLSFIGDSLLQWAVRDGIRDPESYNANSRPITAAALPSFFGQKTHLGFLFALVLVPIAWWLIRRHRWGFRIDALGHNPGTLDANEFSSARVTLSVLVVAGGLAGLAGMVETTGVNIRLGQEASVGYGWDAI 284          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123634.4841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E0RSR3_9ACTN5.120e-8879.31Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A1Q9SST9_9PSEU2.100e-5554.60Uncharacterized protein n=1 Tax=Pseudonocardia sp.... [more]
UPI000E354C804.540e-5355.56ABC transporter permease n=1 Tax=Desertimonas flav... [more]
A0A1Q9SA90_9PSEU1.150e-5254.07Uncharacterized protein n=5 Tax=Pseudonocardia Tax... [more]
A0A4R7J9K3_9ACTN5.250e-4854.60Simple sugar transport system permease protein n=1... [more]
UPI001E3773AD1.030e-4750.58ABC transporter permease n=1 Tax=Pseudonocardia sp... [more]
UPI00101D55E11.280e-4653.76ABC transporter permease n=1 Tax=Phytoactinopolysp... [more]
A0A349B0D9_9ACTN1.180e-4449.71Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A6V8L3A2_9ACTN2.460e-4448.28ABC transporter permease n=1 Tax=Phytohabitans rum... [more]
A0A6B1EI93_9ACTN1.830e-3844.51ABC transporter permease n=1 Tax=Acidimicrobiaceae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001851ABC transporter, permeasePFAMPF02653BPD_transp_2coord: 9..174
e-value: 4.5E-16
score: 58.8
NoneNo IPR availablePANTHERPTHR47089FAMILY NOT NAMEDcoord: 4..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..154
NoneNo IPR availableTMHMMTMhelixcoord: 135..157
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123634contigM-pyrifera_M_contig123634:2..523 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123634.4841.1mRNA_M-pyrifera_M_contig123634.4841.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig123634 2..523 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig123634.4841.1 ID=prot_M-pyrifera_M_contig123634.4841.1|Name=mRNA_M-pyrifera_M_contig123634.4841.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
RDLPGPLLIVGCIVIAGAVGAVWSGISAVLANRFNTSVVISSLLLTYIAA
AAMQWLIRVGIRDPDSFVPASRVIGDASLPTVPVINTHFGFVIAVLVVPV
AAAVMARTRFGYRVDVIGHNPIALQANEVPTGRMLFTVLGLVGLLSGIAG
YIQVAGVTNRINGEFSLDYGFTAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001851ABC_transp_permease