prot_M-pyrifera_M_contig123632.4840.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig123632.4840.1
Unique Nameprot_M-pyrifera_M_contig123632.4840.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length98
Homology
BLAST of mRNA_M-pyrifera_M_contig123632.4840.1 vs. uniprot
Match: A0A7S1M4K0_NEODS (Ribosome assembly factor mrt4 n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1M4K0_NEODS)

HSP 1 Score: 96.3 bits (238), Expect = 1.290e-22
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 0
Query:    7 FARAGSITTVDFTIPKGPLKEMIHSMVHQLTLLGVPVELREGIIHVLKDTPVCVKGEELTAEAAQLLKLFNKVTAIMRVDLVGCW 91
            FARAGS  TVDFT+P GPL +  H+M   L+ LG+P++L +G+I+V  DT VC +G+ELT EAAQ+LKLF   +A M++ L   W
Sbjct:  125 FARAGSTATVDFTVPAGPLAQFPHNMYEHLSKLGLPLKLNKGVINVTADTTVCKEGDELTTEAAQILKLFGIQSAEMKLRLTALW 209          
BLAST of mRNA_M-pyrifera_M_contig123632.4840.1 vs. uniprot
Match: UPI0006236B1D (mRNA turnover protein 4 homolog n=1 Tax=Linepithema humile TaxID=83485 RepID=UPI0006236B1D)

HSP 1 Score: 84.3 bits (207), Expect = 7.730e-18
Identity = 38/96 (39.58%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    1 EFGEYDFARAGSITTVDFTIPKGPLKEMIHSMVHQLTLLGVPVELREGIIHVLKDTPVCVKGEELTAEAAQLLKLFNKVTAIMRVDLVGCWEREKG 96
            E+ E ++AR+G +T     +P+GPL +  HSM  QL  LG+P  L++G+I ++K   +C KG+ LT E AQ+LKLF++  A+ ++ L+G + ++ G
Sbjct:  123 EYEEMEYARSGFVTPESLELPEGPLPQFDHSMEPQLRRLGMPTSLQKGVITLIKPFKICQKGDVLTPEQAQILKLFDRPLAVFKLLLLGVYTKKHG 218          
BLAST of mRNA_M-pyrifera_M_contig123632.4840.1 vs. uniprot
Match: A0A0S4JL62_BODSA (Ribosome assembly factor mrt4 n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JL62_BODSA)

HSP 1 Score: 82.8 bits (203), Expect = 2.220e-17
Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 0
Query:    3 GEYDFARAGSITTVDFTIPKGPLKEMIHSMVHQLTLLGVPVELREGIIHVLKDTPVCVKGEELTAEAAQLLKLFNKVTAIMRVDLVGCW 91
            G   +AR G       T+  GPL +  HSM   L+ LG+P++L +G++ +L+DT VC +G+ L+AEAAQLLKLF   TA  R++L   W
Sbjct:  121 GAQVYARTGQTAAETLTLTAGPLPQFPHSMFEHLSKLGLPIKLDKGVVVLLQDTTVCAEGDTLSAEAAQLLKLFGMQTAEFRIELTAHW 209          
BLAST of mRNA_M-pyrifera_M_contig123632.4840.1 vs. uniprot
Match: UPI0005EF444B (mRNA turnover protein 4 homolog n=1 Tax=Wasmannia auropunctata TaxID=64793 RepID=UPI0005EF444B)

HSP 1 Score: 81.6 bits (200), Expect = 8.850e-17
Identity = 39/96 (40.62%), Postives = 61/96 (63.54%), Query Frame = 0
Query:    1 EFGEYDFARAGSITTVDFTIPKGPLKEMIHSMVHQLTLLGVPVELREGIIHVLKDTPVCVKGEELTAEAAQLLKLFNKVTAIMRVDLVGCWEREKG 96
            E+ E ++AR+G  T     +P+GPL +  HSM  QL  LG+P  L++G+I ++K   VC KG+ LT E AQ+LKL  K  A+ ++ L+G + ++ G
Sbjct:  123 EYEEMEYARSGFATPETVELPEGPLPQFQHSMEPQLRQLGMPTSLKKGVITLIKPFKVCQKGDALTPEQAQILKLLGKPLAVFKLLLLGVYTKKHG 218          
BLAST of mRNA_M-pyrifera_M_contig123632.4840.1 vs. uniprot
Match: W6L9P3_9TRYP (Ribosome assembly factor mrt4 n=1 Tax=Phytomonas sp. isolate Hart1 TaxID=134013 RepID=W6L9P3_9TRYP)

HSP 1 Score: 80.9 bits (198), Expect = 1.240e-16
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    1 EFGEYDFARAGSITTVDFTIPKGPLKEMIHSMVHQLTLLGVPVELREGIIHVLKDTPVCVKGEELTAEAAQLLKLFNKVTAIMRVDLVGCW 91
            + G   +AR G        +P GPL +  HSM   L  LG+P++L +G+I +L+DT VC +G+ L+AEAAQLLKLF   +A  +++L   W
Sbjct:  119 QVGAAVYARTGQTAAASLVLPAGPLTQFPHSMFDHLARLGLPIKLDKGVIILLQDTTVCEEGDTLSAEAAQLLKLFGVQSAEFKIELTAHW 209          
BLAST of mRNA_M-pyrifera_M_contig123632.4840.1 vs. uniprot
Match: Q389X5_TRYB2 (Ribosome assembly factor mrt4 n=3 Tax=Trypanozoon TaxID=39700 RepID=Q389X5_TRYB2)

HSP 1 Score: 80.9 bits (198), Expect = 1.280e-16
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    7 FARAGSITTVDFTIPKGPLKEMIHSMVHQLTLLGVPVELREGIIHVLKDTPVCVKGEELTAEAAQLLKLFNKVTAIMRVDLVGCWER 93
            FAR G + T    +  GPL +  HSM   L+ LG+P++L +G+I +L+DT VC  G+ LTAEAAQLLKLF   +A  +++L   W +
Sbjct:  125 FARTGQVATCPLLLRTGPLAQFPHSMFDHLSRLGLPIKLDKGVIVLLRDTTVCEVGDTLTAEAAQLLKLFGIQSAEFKLELTAHWAK 211          
BLAST of mRNA_M-pyrifera_M_contig123632.4840.1 vs. uniprot
Match: G0UXE2_TRYCI (Ribosome assembly factor mrt4 n=1 Tax=Trypanosoma congolense (strain IL3000) TaxID=1068625 RepID=G0UXE2_TRYCI)

HSP 1 Score: 80.1 bits (196), Expect = 2.450e-16
Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 0
Query:    7 FARAGSITTVDFTIPKGPLKEMIHSMVHQLTLLGVPVELREGIIHVLKDTPVCVKGEELTAEAAQLLKLFNKVTAIMRVDLVGCW 91
            +AR G + T    +  GPL +  HSM   L+ LG+P++L +G+I +L+DT VC  GE L+AEAAQLLKL+   +A  +V+L   W
Sbjct:  125 YARTGQVATCSLPLRAGPLTQFPHSMFDHLSRLGLPIKLEKGVIVLLRDTTVCEVGETLSAEAAQLLKLYGIQSAEFKVELTAHW 209          
BLAST of mRNA_M-pyrifera_M_contig123632.4840.1 vs. uniprot
Match: A0A6P3X6R6_DINQU (Ribosome assembly factor mrt4 n=1 Tax=Dinoponera quadriceps TaxID=609295 RepID=A0A6P3X6R6_DINQU)

HSP 1 Score: 80.1 bits (196), Expect = 3.410e-16
Identity = 37/95 (38.95%), Postives = 62/95 (65.26%), Query Frame = 0
Query:    2 FGEYDFARAGSITTVDFTIPKGPLKEMIHSMVHQLTLLGVPVELREGIIHVLKDTPVCVKGEELTAEAAQLLKLFNKVTAIMRVDLVGCWEREKG 96
            + + ++ARAG +      +P+GPL +  HSM  QL  LG+P  L++G+I ++K   VC KG+ LT+E AQ+LKL +K  A+ ++ L+G + ++ G
Sbjct:  124 YEKLEYARAGFVAPQSVKLPEGPLPQFQHSMEPQLRQLGMPTSLQKGVITLIKSYKVCQKGDVLTSEQAQILKLLDKPLAVFKLLLLGVYTKKHG 218          
BLAST of mRNA_M-pyrifera_M_contig123632.4840.1 vs. uniprot
Match: A0A0M9G3K4_9TRYP (Ribosome assembly factor mrt4 n=2 Tax=Leptomonas TaxID=5683 RepID=A0A0M9G3K4_9TRYP)

HSP 1 Score: 79.3 bits (194), Expect = 5.170e-16
Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = 0
Query:    7 FARAGSITTVDFTIPKGPLKEMIHSMVHQLTLLGVPVELREGIIHVLKDTPVCVKGEELTAEAAQLLKLFNKVTAIMRVDLVGCW 91
            +AR G   T    +  GPL +  HSM   L  LG+P++L  G+I +L+DT VC  G+ L+AEAAQLLKLF   +A  ++DL   W
Sbjct:  125 YARTGQTATESLVLKAGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPGDTLSAEAAQLLKLFGMQSAEFKIDLTAHW 209          
BLAST of mRNA_M-pyrifera_M_contig123632.4840.1 vs. uniprot
Match: W6KQL2_9TRYP (Ribosome assembly factor mrt4 n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KQL2_9TRYP)

HSP 1 Score: 79.0 bits (193), Expect = 6.770e-16
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    1 EFGEYDFARAGSITTVDFTIPKGPLKEMIHSMVHQLTLLGVPVELREGIIHVLKDTPVCVKGEELTAEAAQLLKLFNKVTAIMRVDLVGCW 91
            + G   +AR G   T    +  GPL +  HSM   L  LG+P++L +G+I +L+DT VC +G+ L+AEAAQLLKLF   +A  +++L   W
Sbjct:  119 QIGAQVYARTGQTATRSLVLNAGPLPQFPHSMFDHLAKLGLPIKLDKGVIVLLQDTTVCEEGDTLSAEAAQLLKLFGVQSAEFKIELTAHW 209          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123632.4840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1M4K0_NEODS1.290e-2252.94Ribosome assembly factor mrt4 n=1 Tax=Neobodo desi... [more]
UPI0006236B1D7.730e-1839.58mRNA turnover protein 4 homolog n=1 Tax=Linepithem... [more]
A0A0S4JL62_BODSA2.220e-1743.82Ribosome assembly factor mrt4 n=1 Tax=Bodo saltans... [more]
UPI0005EF444B8.850e-1740.63mRNA turnover protein 4 homolog n=1 Tax=Wasmannia ... [more]
W6L9P3_9TRYP1.240e-1641.76Ribosome assembly factor mrt4 n=1 Tax=Phytomonas s... [more]
Q389X5_TRYB21.280e-1644.83Ribosome assembly factor mrt4 n=3 Tax=Trypanozoon ... [more]
G0UXE2_TRYCI2.450e-1644.71Ribosome assembly factor mrt4 n=1 Tax=Trypanosoma ... [more]
A0A6P3X6R6_DINQU3.410e-1638.95Ribosome assembly factor mrt4 n=1 Tax=Dinoponera q... [more]
A0A0M9G3K4_9TRYP5.170e-1644.71Ribosome assembly factor mrt4 n=2 Tax=Leptomonas T... [more]
W6KQL2_9TRYP6.770e-1641.76Ribosome assembly factor mrt4 n=1 Tax=Phytomonas s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.105.20coord: 7..79
e-value: 6.2E-19
score: 69.7
NoneNo IPR availablePANTHERPTHR45841:SF1MRNA TURNOVER PROTEIN 4 HOMOLOGcoord: 1..94
NoneNo IPR availablePANTHERPTHR45841FAMILY NOT NAMEDcoord: 1..94
IPR04063760S ribosomal protein L10P, insertion domainPFAMPF17777RL10P_insertcoord: 8..77
e-value: 1.1E-19
score: 70.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123632contigM-pyrifera_M_contig123632:3..296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123632.4840.1mRNA_M-pyrifera_M_contig123632.4840.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig123632 3..296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig123632.4840.1 ID=prot_M-pyrifera_M_contig123632.4840.1|Name=mRNA_M-pyrifera_M_contig123632.4840.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp
EFGEYDFARAGSITTVDFTIPKGPLKEMIHSMVHQLTLLGVPVELREGII
HVLKDTPVCVKGEELTAEAAQLLKLFNKVTAIMRVDLVGCWEREKGQW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040637RL10P_insert