prot_M-pyrifera_M_contig123587.4828.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig123587.4828.1
Unique Nameprot_M-pyrifera_M_contig123587.4828.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length132
Homology
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BLAST of mRNA_M-pyrifera_M_contig123587.4828.1 vs. uniprot
Match: A0A7V2Y4R2_9BACT (Tetratricopeptide repeat protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y4R2_9BACT)

HSP 1 Score: 106 bits (264), Expect = 3.960e-24
Identity = 53/112 (47.32%), Postives = 77/112 (68.75%), Query Frame = 0 
Query:   12 FATFIQENPLHRKRTRAETIMGRLYYELGDYDKAIDMLRDQADPANDPQAALTMLRYLARAYSQKSEYEAAESAYLQAASFPGNYTVDEDFRSLGELYKIRADLATSDANRD 123
            F  F+  NP H K  RA+ +MG LY++LGDY K+I++L+D +    DP+AAL  LR LARA  +  +Y+AAESAYLQAA   GNYT D D+  LG+L++ +++    +A+R+
Sbjct:  374 FERFVSANPGHVKTARAKALMGLLYFDLGDYAKSIELLQDPSLALADPEAALPALRTLARARWKMGDYDAAESAYLQAAVLAGNYTPDRDYEELGDLHRWQSERDEDEASRE 485
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BLAST of mRNA_M-pyrifera_M_contig123587.4828.1 vs. uniprot
Match: A0A7Y5C520_9BACT (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C520_9BACT)

HSP 1 Score: 92.8 bits (229), Expect = 2.350e-19
Identity = 49/105 (46.67%), Postives = 66/105 (62.86%), Query Frame = 0 
Query:   12 FATFIQENPLHRKRTRAETIMGRLYYELGDYDKAIDMLRDQADPANDPQAALTMLRYLARAYSQKSEYEAAESAYLQAASFPGNYTVDEDFRSLGELYKIRADLA 116
            F  + ++NP H K  RAE++MGRL YE G Y +AI++LR+      DP + +  LR LARA ++  + EAA S YLQA    GNY+ D D+  LG LY+ RAD A
Sbjct:  434 FEQYRKDNPAHAKVARAESLMGRLNYESGRYQEAIELLRNPELRLRDPASTVPTLRTLARASAKMGDAEAARSYYLQAVGVQGNYSPDVDYAELGSLYQSRADKA 538
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123587.4828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7V2Y4R2_9BACT3.960e-2447.32Tetratricopeptide repeat protein n=1 Tax=Candidatu... [more]
A0A7Y5C520_9BACT2.350e-1946.67LysM peptidoglycan-binding domain-containing prote... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatPFAMPF13176TPR_7coord: 32..59
e-value: 0.0032
score: 17.4
coord: 67..89
e-value: 0.016
score: 15.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..108
e-value: 8.2E-12
score: 47.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..96
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..96
score: 10.911

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123587contigM-pyrifera_M_contig123587:108..503 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123587.4828.1mRNA_M-pyrifera_M_contig123587.4828.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig123587 108..503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig123587.4828.1 ID=prot_M-pyrifera_M_contig123587.4828.1|Name=mRNA_M-pyrifera_M_contig123587.4828.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
MRRRYTAAVVRFATFIQENPLHRKRTRAETIMGRLYYELGDYDKAIDMLR
DQADPANDPQAALTMLRYLARAYSQKSEYEAAESAYLQAASFPGNYTVDE
DFRSLGELYKIRADLATSDANRDAFMETAATY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom