prot_M-pyrifera_M_contig122949.4714.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122949.4714.1
Unique Nameprot_M-pyrifera_M_contig122949.4714.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length142
Homology
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A2D8CI79_9BACT (LTD domain-containing protein n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CI79_9BACT)

HSP 1 Score: 126 bits (316), Expect = 6.370e-31
Identity = 64/129 (49.61%), Postives = 91/129 (70.54%), Query Frame = 0
Query:   19 YSGSLTEFIDHDWLTYWVEAEDTDGETNQ--SNSKVF---NLKSSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 142
            YSGS+    +    ++++ AED    +++  +NS  F      +S NS++INEF+ DNE+GIQDE D F+DW+ELYNPT+  I L+D++LTDDF+D  KWA PDT I  G  +LIWAD+++EEG+LHTN
Sbjct:  486 YSGSIILDENIGDFSFYMMAEDEQALSSRYPNNSDRFLNYEFLASKNSLLINEFLTDNETGIQDESDSFEDWVELYNPTENSISLSDYFLTDDFDDPTKWAFPDTSIPAGGHLLIWADNDEEEGLLHTN 614          
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A359E999_9BACT (LTD domain-containing protein (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A359E999_9BACT)

HSP 1 Score: 124 bits (312), Expect = 1.360e-30
Identity = 64/129 (49.61%), Postives = 90/129 (69.77%), Query Frame = 0
Query:   19 YSGSLTEFIDHDWLTYWVEAEDTDGETNQ--SNSKVF---NLKSSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 142
            YSGS+    +    ++++ AED    +++  +NS  F      +S NS++INEF+ DNE+GIQDE D F+DW+ELYNPT+  I L+D++LTDDF D  KWA PDT I  G  +LIWAD+++EEG+LHTN
Sbjct:  400 YSGSIILDENIGDFSFYMMAEDEQALSSRYPNNSDRFLNYEFLASKNSLLINEFLTDNETGIQDESDSFEDWVELYNPTENSISLSDYFLTDDFYDPTKWAFPDTSIPAGGHLLIWADNDEEEGLLHTN 528          
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A7C5HDR4_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Candidatus Cloacimonetes bacterium TaxID=2030808 RepID=A0A7C5HDR4_9BACT)

HSP 1 Score: 108 bits (269), Expect = 1.590e-25
Identity = 61/152 (40.13%), Postives = 90/152 (59.21%), Query Frame = 0
Query:    1 ITLSDNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDG--ETNQSNSKVFNLKSSIN----SIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKW-----ALPD-TIIQPGHFILIWADSEDEEGILH 140
            IT+ D+G + D GA D IY G + +      + Y++EA D      T   N+     +  ++     I INEFMADNES I D  ++++DWIE+YN ++EPI +   Y TD+F +   W     + PD T IQPG+F+L+WAD++ E+GILH
Sbjct:   23 ITMYDDGQHGDSGANDNIYGGYIPQLPSGTSVNYYLEATDDMSAVSTYPENAPDLTFQYVVDYDPPQIFINEFMADNESFITDPQEEYEDWIEIYNASEEPIDIGGLYFTDNFSNPTDWWKIPESYPDSTTIQPGNFLLLWADNDSEDGILH 174          
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A2A5XW88_9BACT (LTD domain-containing protein n=1 Tax=Rhodothermaeota bacterium MED-G12 TaxID=1986237 RepID=A0A2A5XW88_9BACT)

HSP 1 Score: 109 bits (273), Expect = 4.060e-25
Identity = 53/116 (45.69%), Postives = 74/116 (63.79%), Query Frame = 0
Query:   32 LTYWVEAEDTDGETNQ-----SNSKVFNLKSSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 142
            L Y + A   DG   +      N +   ++     ++INE MADNE+ +QD Y  F+DW+ELYNP   P++L+ +YLTDD  +  KWALPDT +Q G ++LIW D++DEEG LHTN
Sbjct:  542 LRYALHARSNDGGVKRYPRATENYRSLAVQRPSEKLLINELMADNETTLQDPYGAFEDWVELYNPGASPVNLSGYYLTDDLSNPGKWALPDTQLQAGGYLLIWTDNDDEEGSLHTN 657          
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A2N2WJJ3_9BACT (LTD domain-containing protein n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-9 TaxID=2013699 RepID=A0A2N2WJJ3_9BACT)

HSP 1 Score: 108 bits (271), Expect = 7.450e-25
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 0
Query:    3 LSDNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDGETNQSNSKVFNLK---SSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 142
            + D+G N D  A D IYS SL+    +  + + ++A D    T          K    ++ ++ INEFMA N S I DE  ++DDWIELYN  +  I L D YLTD+    +KWALPDT I PG F+L+WAD + E+G +HTN
Sbjct:  474 MHDDGQNGDLMADDHIYSVSLSGMEGNTLIEFSIKATDNSQLTTIRPCSPIQYKIPSGNVYNLYINEFMASNSSTITDENGEYDDWIELYNAGNSTIWLGDKYLTDNLSSPVKWALPDTTIAPGSFMLVWADGQPEQGQIHTN 616          
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A2E6N5Z0_9BACT (LTD domain-containing protein n=2 Tax=Balneola sp. TaxID=2024824 RepID=A0A2E6N5Z0_9BACT)

HSP 1 Score: 106 bits (265), Expect = 4.840e-24
Identity = 51/116 (43.97%), Postives = 74/116 (63.79%), Query Frame = 0
Query:   32 LTYWVEAEDTDGETNQS-----NSKVFNLKSSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 142
            L Y + A   DG   +      N ++  ++     ++INE M+DNE+ I+D +D F+DW+E+YNP    I L+ +YLTDD  +  KWALPDT +  G+++LIWAD +DEEG LHTN
Sbjct:  538 LNYALHARSNDGGVKRFPRATVNYRIHTVQKLSKKLLINELMSDNETTIRDPFDVFEDWVEIYNPGSSNIELSGYYLTDDLNNPGKWALPDTQLLAGNYLLIWADDDDEEGSLHTN 653          
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A3M1Z7U4_9BACT (LTD domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1Z7U4_9BACT)

HSP 1 Score: 106 bits (264), Expect = 6.560e-24
Identity = 55/142 (38.73%), Postives = 84/142 (59.15%), Query Frame = 0
Query:    5 DNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDGETNQS----NSKVFNLKSSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 142
            D+G + D  A DGI+   L        L Y+++A D DG+T +     N K++ L      I+INE M  N+  I D Y +FDDWIELYNPT+ P+ L +++L+D+ +   KW LP+T + P  ++L+WAD ++ +G  H N
Sbjct:  488 DDGLHDDDQAGDGIFGAILPALHQQTTLEYYIQATDADGKTARQPICQNLKIY-LGPINPGIVINEVMPKNDQTIADPYGEFDDWIELYNPTNTPVFLGNYFLSDNPDKPDKWRLPETFLTPNAYLLVWADKDEAQGNTHAN 628          
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A7C5HL48_9BACT (Lamin tail domain-containing protein n=1 Tax=Candidatus Cloacimonetes bacterium TaxID=2030808 RepID=A0A7C5HL48_9BACT)

HSP 1 Score: 102 bits (253), Expect = 2.020e-23
Identity = 58/150 (38.67%), Postives = 89/150 (59.33%), Query Frame = 0
Query:    1 ITLSDNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDGETNQ--SNSKVFNLKSSIN--SIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKW-ALPDT-----IIQPGHFILIWADSEDEEGILH 140
            I + DNG N D  A D +Y   +T+ I    ++Y++EAED +    +   N+ +   +   N  S+ INEF+A N +  QD   ++DDWIE+YN ++E I+++  Y+TDD  D   W  +P+T      IQPG FIL+WAD++  +GILH
Sbjct:   25 IYMFDNGQNNDGFAGDAVYGCYITQQISGTIVSYYIEAEDNEQVITRFPENNNLIEYEVDYNCPSLFINEFLALNRTTNQDPEGEYDDWIEIYNASEEAINISGMYITDDLTDHSHWYQIPETNPDSTTIQPGDFILLWADNDSADGILH 174          
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A350BV52_9BACT (LTD domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A350BV52_9BACT)

HSP 1 Score: 103 bits (257), Expect = 5.710e-23
Identity = 56/144 (38.89%), Postives = 84/144 (58.33%), Query Frame = 0
Query:    1 ITLSDNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDGETNQSNSKVFNLKS--SINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 142
            + + D+G   D  A DGIY  S++    +  L Y+V AE+    T   ++  +N      +  ++INEF A N + I DE   F+DWIEL+N  D  I+L  ++L+DD  D  +W LP+  I  G + LIWAD+++E+GILHTN
Sbjct:  464 MEMKDDGLAGDDQAMDGIYGASISSSSAN--LDYYVYAENDSAGTFSPSNAAYNFYEIREVKQLVINEFCASNSTIISDENGQFEDWIELFNNGDTTINLLGYFLSDDINDLGQWGLPEISIAAGEYALIWADNDEEDGILHTN 605          
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A848UUH0_9FLAO (T9SS type A sorting domain-containing protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A848UUH0_9FLAO)

HSP 1 Score: 101 bits (251), Expect = 8.410e-23
Identity = 60/143 (41.96%), Postives = 81/143 (56.64%), Query Frame = 0
Query:    1 ITLSDNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDGETNQSNSKVFNLKSSIN-SIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 142
            ++L DNG+N D+ A DG ++  L      D L Y +      GE            S  N  +++NE MA N +   DE   F+DWIEL+N +D  I+L D YLTDD ++ L+W +PD  I PG FIL WAD + +EGILHTN
Sbjct:   81 VSLWDNGTNGDQVAEDGTWTYFLNLDDWMDQLEYQMIGYHAGGEIIAPCEPQLVWTSPNNIGLVVNEVMASNATTNWDETGAFEDWIELFNDSDNAIYLGDKYLTDDIDNPLRWKMPDVTIDPGGFILFWADKDLDEGILHTN 223          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8CI79_9BACT6.370e-3149.61LTD domain-containing protein n=3 Tax=Balneolaceae... [more]
A0A359E999_9BACT1.360e-3049.61LTD domain-containing protein (Fragment) n=1 Tax=B... [more]
A0A7C5HDR4_9BACT1.590e-2540.13T9SS type A sorting domain-containing protein n=1 ... [more]
A0A2A5XW88_9BACT4.060e-2545.69LTD domain-containing protein n=1 Tax=Rhodothermae... [more]
A0A2N2WJJ3_9BACT7.450e-2542.66LTD domain-containing protein n=1 Tax=Bacteroidete... [more]
A0A2E6N5Z0_9BACT4.840e-2443.97LTD domain-containing protein n=2 Tax=Balneola sp.... [more]
A0A3M1Z7U4_9BACT6.560e-2438.73LTD domain-containing protein n=1 Tax=Bacteroidete... [more]
A0A7C5HL48_9BACT2.020e-2338.67Lamin tail domain-containing protein n=1 Tax=Candi... [more]
A0A350BV52_9BACT5.710e-2338.89LTD domain-containing protein n=1 Tax=Bacteroidete... [more]
A0A848UUH0_9FLAO8.410e-2341.96T9SS type A sorting domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001322Lamin tail domainPFAMPF00932LTDcoord: 58..133
e-value: 2.9E-12
score: 46.9
IPR001322Lamin tail domainPROSITEPS51841LTDcoord: 42..142
score: 10.307
IPR036415Lamin tail domain superfamilySUPERFAMILY74853Lamin A/C globular tail domaincoord: 42..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122949contigM-pyrifera_M_contig122949:101..526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122949.4714.1mRNA_M-pyrifera_M_contig122949.4714.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122949 101..526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122949.4714.1 ID=prot_M-pyrifera_M_contig122949.4714.1|Name=mRNA_M-pyrifera_M_contig122949.4714.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp
ITLSDNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDGETNQSNS
KVFNLKSSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTD
FYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001322Lamin_tail_dom
IPR036415Lamin_tail_dom_sf