mRNA_M-pyrifera_M_contig122949.4714.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A2D8CI79_9BACT (LTD domain-containing protein n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CI79_9BACT) HSP 1 Score: 126 bits (316), Expect = 6.370e-31 Identity = 64/129 (49.61%), Postives = 91/129 (70.54%), Query Frame = 1
Query: 55 YSGSLTEFIDHDWLTYWVEAEDTDGETNQ--SNSKVF---NLKSSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 426
YSGS+ + ++++ AED +++ +NS F +S NS++INEF+ DNE+GIQDE D F+DW+ELYNPT+ I L+D++LTDDF+D KWA PDT I G +LIWAD+++EEG+LHTN
Sbjct: 486 YSGSIILDENIGDFSFYMMAEDEQALSSRYPNNSDRFLNYEFLASKNSLLINEFLTDNETGIQDESDSFEDWVELYNPTENSISLSDYFLTDDFDDPTKWAFPDTSIPAGGHLLIWADNDEEEGLLHTN 614
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A359E999_9BACT (LTD domain-containing protein (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A359E999_9BACT) HSP 1 Score: 124 bits (312), Expect = 1.360e-30 Identity = 64/129 (49.61%), Postives = 90/129 (69.77%), Query Frame = 1
Query: 55 YSGSLTEFIDHDWLTYWVEAEDTDGETNQ--SNSKVF---NLKSSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 426
YSGS+ + ++++ AED +++ +NS F +S NS++INEF+ DNE+GIQDE D F+DW+ELYNPT+ I L+D++LTDDF D KWA PDT I G +LIWAD+++EEG+LHTN
Sbjct: 400 YSGSIILDENIGDFSFYMMAEDEQALSSRYPNNSDRFLNYEFLASKNSLLINEFLTDNETGIQDESDSFEDWVELYNPTENSISLSDYFLTDDFYDPTKWAFPDTSIPAGGHLLIWADNDEEEGLLHTN 528
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A7C5HDR4_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Candidatus Cloacimonetes bacterium TaxID=2030808 RepID=A0A7C5HDR4_9BACT) HSP 1 Score: 108 bits (269), Expect = 1.590e-25 Identity = 61/152 (40.13%), Postives = 90/152 (59.21%), Query Frame = 1
Query: 1 ITLSDNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDG--ETNQSNSKVFNLKSSIN----SIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKW-----ALPD-TIIQPGHFILIWADSEDEEGILH 420
IT+ D+G + D GA D IY G + + + Y++EA D T N+ + ++ I INEFMADNES I D ++++DWIE+YN ++EPI + Y TD+F + W + PD T IQPG+F+L+WAD++ E+GILH
Sbjct: 23 ITMYDDGQHGDSGANDNIYGGYIPQLPSGTSVNYYLEATDDMSAVSTYPENAPDLTFQYVVDYDPPQIFINEFMADNESFITDPQEEYEDWIEIYNASEEPIDIGGLYFTDNFSNPTDWWKIPESYPDSTTIQPGNFLLLWADNDSEDGILH 174
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A2A5XW88_9BACT (LTD domain-containing protein n=1 Tax=Rhodothermaeota bacterium MED-G12 TaxID=1986237 RepID=A0A2A5XW88_9BACT) HSP 1 Score: 109 bits (273), Expect = 4.060e-25 Identity = 53/116 (45.69%), Postives = 74/116 (63.79%), Query Frame = 1
Query: 94 LTYWVEAEDTDGETNQ-----SNSKVFNLKSSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 426
L Y + A DG + N + ++ ++INE MADNE+ +QD Y F+DW+ELYNP P++L+ +YLTDD + KWALPDT +Q G ++LIW D++DEEG LHTN
Sbjct: 542 LRYALHARSNDGGVKRYPRATENYRSLAVQRPSEKLLINELMADNETTLQDPYGAFEDWVELYNPGASPVNLSGYYLTDDLSNPGKWALPDTQLQAGGYLLIWTDNDDEEGSLHTN 657
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A2N2WJJ3_9BACT (LTD domain-containing protein n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-9 TaxID=2013699 RepID=A0A2N2WJJ3_9BACT) HSP 1 Score: 108 bits (271), Expect = 7.450e-25 Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 1
Query: 7 LSDNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDGETNQSNSKVFNLK---SSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 426
+ D+G N D A D IYS SL+ + + + ++A D T K ++ ++ INEFMA N S I DE ++DDWIELYN + I L D YLTD+ +KWALPDT I PG F+L+WAD + E+G +HTN
Sbjct: 474 MHDDGQNGDLMADDHIYSVSLSGMEGNTLIEFSIKATDNSQLTTIRPCSPIQYKIPSGNVYNLYINEFMASNSSTITDENGEYDDWIELYNAGNSTIWLGDKYLTDNLSSPVKWALPDTTIAPGSFMLVWADGQPEQGQIHTN 616
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A2E6N5Z0_9BACT (LTD domain-containing protein n=2 Tax=Balneola sp. TaxID=2024824 RepID=A0A2E6N5Z0_9BACT) HSP 1 Score: 106 bits (265), Expect = 4.840e-24 Identity = 51/116 (43.97%), Postives = 74/116 (63.79%), Query Frame = 1
Query: 94 LTYWVEAEDTDGETNQS-----NSKVFNLKSSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 426
L Y + A DG + N ++ ++ ++INE M+DNE+ I+D +D F+DW+E+YNP I L+ +YLTDD + KWALPDT + G+++LIWAD +DEEG LHTN
Sbjct: 538 LNYALHARSNDGGVKRFPRATVNYRIHTVQKLSKKLLINELMSDNETTIRDPFDVFEDWVEIYNPGSSNIELSGYYLTDDLNNPGKWALPDTQLLAGNYLLIWADDDDEEGSLHTN 653
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A3M1Z7U4_9BACT (LTD domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1Z7U4_9BACT) HSP 1 Score: 106 bits (264), Expect = 6.560e-24 Identity = 55/142 (38.73%), Postives = 84/142 (59.15%), Query Frame = 1
Query: 13 DNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDGETNQS----NSKVFNLKSSINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 426
D+G + D A DGI+ L L Y+++A D DG+T + N K++ L I+INE M N+ I D Y +FDDWIELYNPT+ P+ L +++L+D+ + KW LP+T + P ++L+WAD ++ +G H N
Sbjct: 488 DDGLHDDDQAGDGIFGAILPALHQQTTLEYYIQATDADGKTARQPICQNLKIY-LGPINPGIVINEVMPKNDQTIADPYGEFDDWIELYNPTNTPVFLGNYFLSDNPDKPDKWRLPETFLTPNAYLLVWADKDEAQGNTHAN 628
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A7C5HL48_9BACT (Lamin tail domain-containing protein n=1 Tax=Candidatus Cloacimonetes bacterium TaxID=2030808 RepID=A0A7C5HL48_9BACT) HSP 1 Score: 102 bits (253), Expect = 2.020e-23 Identity = 58/150 (38.67%), Postives = 89/150 (59.33%), Query Frame = 1
Query: 1 ITLSDNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDGETNQ--SNSKVFNLKSSIN--SIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKW-ALPDT-----IIQPGHFILIWADSEDEEGILH 420
I + DNG N D A D +Y +T+ I ++Y++EAED + + N+ + + N S+ INEF+A N + QD ++DDWIE+YN ++E I+++ Y+TDD D W +P+T IQPG FIL+WAD++ +GILH
Sbjct: 25 IYMFDNGQNNDGFAGDAVYGCYITQQISGTIVSYYIEAEDNEQVITRFPENNNLIEYEVDYNCPSLFINEFLALNRTTNQDPEGEYDDWIEIYNASEEAINISGMYITDDLTDHSHWYQIPETNPDSTTIQPGDFILLWADNDSADGILH 174
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A350BV52_9BACT (LTD domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A350BV52_9BACT) HSP 1 Score: 103 bits (257), Expect = 5.710e-23 Identity = 56/144 (38.89%), Postives = 84/144 (58.33%), Query Frame = 1
Query: 1 ITLSDNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDGETNQSNSKVFNLKS--SINSIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 426
+ + D+G D A DGIY S++ + L Y+V AE+ T ++ +N + ++INEF A N + I DE F+DWIEL+N D I+L ++L+DD D +W LP+ I G + LIWAD+++E+GILHTN
Sbjct: 464 MEMKDDGLAGDDQAMDGIYGASISSSSAN--LDYYVYAENDSAGTFSPSNAAYNFYEIREVKQLVINEFCASNSTIISDENGQFEDWIELFNNGDTTINLLGYFLSDDINDLGQWGLPEISIAAGEYALIWADNDEEDGILHTN 605
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Match: A0A848UUH0_9FLAO (T9SS type A sorting domain-containing protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A848UUH0_9FLAO) HSP 1 Score: 101 bits (251), Expect = 8.410e-23 Identity = 60/143 (41.96%), Postives = 81/143 (56.64%), Query Frame = 1
Query: 1 ITLSDNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDGETNQSNSKVFNLKSSIN-SIIINEFMADNESGIQDEYDDFDDWIELYNPTDEPIHLTDFYLTDDFEDELKWALPDTIIQPGHFILIWADSEDEEGILHTN 426
++L DNG+N D+ A DG ++ L D L Y + GE S N +++NE MA N + DE F+DWIEL+N +D I+L D YLTDD ++ L+W +PD I PG FIL WAD + +EGILHTN
Sbjct: 81 VSLWDNGTNGDQVAEDGTWTYFLNLDDWMDQLEYQMIGYHAGGEIIAPCEPQLVWTSPNNIGLVVNEVMASNATTNWDETGAFEDWIELFNDSDNAIYLGDKYLTDDIDNPLRWKMPDVTIDPGGFILFWADKDLDEGILHTN 223 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122949.4714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122949.4714.1 >prot_M-pyrifera_M_contig122949.4714.1 ID=prot_M-pyrifera_M_contig122949.4714.1|Name=mRNA_M-pyrifera_M_contig122949.4714.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp ITLSDNGSNIDKGAYDGIYSGSLTEFIDHDWLTYWVEAEDTDGETNQSNSback to top mRNA from alignment at M-pyrifera_M_contig122949:101..526+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122949.4714.1 ID=mRNA_M-pyrifera_M_contig122949.4714.1|Name=mRNA_M-pyrifera_M_contig122949.4714.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig122949:101..526+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122949:101..526+ >mRNA_M-pyrifera_M_contig122949.4714.1 ID=mRNA_M-pyrifera_M_contig122949.4714.1|Name=mRNA_M-pyrifera_M_contig122949.4714.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig122949:101..526+ (Macrocystis pyrifera P11B4 male)back to top |