prot_M-pyrifera_M_contig122119.4549.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122119.4549.1
Unique Nameprot_M-pyrifera_M_contig122119.4549.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length74
Homology
BLAST of mRNA_M-pyrifera_M_contig122119.4549.1 vs. uniprot
Match: A0A7S1YEB3_9EUKA (Ras-related protein Rab (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1YEB3_9EUKA)

HSP 1 Score: 105 bits (261), Expect = 1.710e-26
Identity = 50/70 (71.43%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    5 IIRRYVQDKFVASYKSTIGLDFSVKNIKWDESSEVVLQLWDIAGQERFRNMTRSYYKGAVGAIVVFDVTR 74
            II+R+V + F  +YKSTIG+DF++K IKWD+ +EV LQLWDIAGQERF NMTR YYK AVGA+VVFDVTR
Sbjct:   53 IIKRFVHNIFSTNYKSTIGVDFALKVIKWDDHTEVRLQLWDIAGQERFGNMTRVYYKEAVGALVVFDVTR 122          
BLAST of mRNA_M-pyrifera_M_contig122119.4549.1 vs. uniprot
Match: A0A0B7MYN4_9FUNG (Ras-related protein Rab n=4 Tax=Mucoraceae TaxID=34489 RepID=A0A0B7MYN4_9FUNG)

HSP 1 Score: 102 bits (255), Expect = 1.270e-25
Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    5 IIRRYVQDKFVASYKSTIGLDFSVKNIKWDESSEVVLQLWDIAGQERFRNMTRSYYKGAVGAIVVFDVTR 74
            IIRRYV + F ++YKSTIG+DF++K I+WD  S V LQLWDIAGQERF NMTR YYK A+GAIVV+DVTR
Sbjct:   24 IIRRYVHNIFSSNYKSTIGVDFALKVIQWDSDSIVRLQLWDIAGQERFGNMTRVYYKEALGAIVVYDVTR 93          
BLAST of mRNA_M-pyrifera_M_contig122119.4549.1 vs. uniprot
Match: A0A7S4MNH4_9EUKA (Ras-related protein Rab n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MNH4_9EUKA)

HSP 1 Score: 103 bits (256), Expect = 1.290e-25
Identity = 51/70 (72.86%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    5 IIRRYVQDKFVASYKSTIGLDFSVKNIKWDESSEVVLQLWDIAGQERFRNMTRSYYKGAVGAIVVFDVTR 74
            II+RYV + F   YKSTIG+DF++K I WDE+S V LQLWDIAGQERF NMTR YYK AVGA VVFDVTR
Sbjct:   40 IIKRYVHNIFSMHYKSTIGVDFALKVINWDENSVVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTR 109          
BLAST of mRNA_M-pyrifera_M_contig122119.4549.1 vs. uniprot
Match: UPI0015B0903B (ras-related protein Rab-32 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B0903B)

HSP 1 Score: 102 bits (253), Expect = 4.700e-25
Identity = 49/70 (70.00%), Postives = 55/70 (78.57%), Query Frame = 0
Query:    5 IIRRYVQDKFVASYKSTIGLDFSVKNIKWDESSEVVLQLWDIAGQERFRNMTRSYYKGAVGAIVVFDVTR 74
            IIRRY    F  +Y+ TIG+DFS+K I WD S+ V LQLWDIAGQERF NMTR YYKGAVGA VVFD+TR
Sbjct:   60 IIRRYAHQLFSENYRVTIGVDFSLKVINWDSSTSVRLQLWDIAGQERFGNMTRVYYKGAVGAFVVFDLTR 129          
BLAST of mRNA_M-pyrifera_M_contig122119.4549.1 vs. uniprot
Match: L8HHC7_ACACA (Ras-related protein Rab n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHC7_ACACA)

HSP 1 Score: 101 bits (251), Expect = 5.270e-25
Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    5 IIRRYVQDKFVASYKSTIGLDFSVKNIKWDESSEVVLQLWDIAGQERFRNMTRSYYKGAVGAIVVFDVTR 74
            IIRRYV + +  SYKSTIG+DF++K I WD  + V LQLWDIAGQER+ NMTR YYK AVGA VVFD+TR
Sbjct:   26 IIRRYVNNMYSDSYKSTIGVDFALKEINWDSKTLVRLQLWDIAGQERYGNMTRVYYKEAVGAFVVFDITR 95          
BLAST of mRNA_M-pyrifera_M_contig122119.4549.1 vs. uniprot
Match: UPI001AAD88FA (ras-related protein Rab-32 isoform X2 n=2 Tax=Ranoidea TaxID=30352 RepID=UPI001AAD88FA)

HSP 1 Score: 100 bits (250), Expect = 6.950e-25
Identity = 49/70 (70.00%), Postives = 55/70 (78.57%), Query Frame = 0
Query:    5 IIRRYVQDKFVASYKSTIGLDFSVKNIKWDESSEVVLQLWDIAGQERFRNMTRSYYKGAVGAIVVFDVTR 74
            IIRRYVQ  F   Y++TIG+DF++K I WD  + V LQLWDIAGQERF NMTR YYK AVGA VVFDVTR
Sbjct:   28 IIRRYVQQLFTEHYRTTIGMDFALKIIDWDNGTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTR 97          
BLAST of mRNA_M-pyrifera_M_contig122119.4549.1 vs. uniprot
Match: A0A1S3AHG3_ERIEU (Ras-related protein Rab n=1 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S3AHG3_ERIEU)

HSP 1 Score: 100 bits (248), Expect = 1.320e-24
Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    5 IIRRYVQDKFVASYKSTIGLDFSVKNIKWDESSEVVLQLWDIAGQERFRNMTRSYYKGAVGAIVVFDVTR 74
            II+RYVQ +F A Y++TIG+DF++K ++WD ++ V LQLWDIAGQERF NMTR YY+ A+GA +VFDVTR
Sbjct:   25 IIKRYVQQRFSAHYRATIGVDFALKVLRWDANTVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTR 94          
BLAST of mRNA_M-pyrifera_M_contig122119.4549.1 vs. uniprot
Match: UPI0008708CE3 (ras-related protein Rab-32 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0008708CE3)

HSP 1 Score: 98.2 bits (243), Expect = 2.030e-24
Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    5 IIRRYVQDKFVASYKSTIGLDFSVKNIKWDESSEVVLQLWDIAGQERFRNMTRSYYKGAVGAIVVFDVTR 74
            IIRRYV   +   Y++TIG+DF++K I+WDE++ V LQLWDIAGQERF NMTR Y+K AVGA +VFDVTR
Sbjct:   55 IIRRYVHKAYSEHYRATIGVDFALKVIQWDENTVVRLQLWDIAGQERFGNMTRVYFKEAVGAFIVFDVTR 124          
BLAST of mRNA_M-pyrifera_M_contig122119.4549.1 vs. uniprot
Match: M3XLF6_LATCH (Ras-related protein Rab n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=M3XLF6_LATCH)

HSP 1 Score: 98.6 bits (244), Expect = 2.160e-24
Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 0
Query:    5 IIRRYVQDKFVASYKSTIGLDFSVKNIKWDESSEVVLQLWDIAGQERFRNMTRSYYKGAVGAIVVFDVTR 74
            II+RYV   F   Y++TIG+DF++K I WD S+ V LQLWDIAGQERF NMTR YYK AVGA VVFDVTR
Sbjct:   29 IIKRYVHQLFSQHYRATIGVDFALKVINWDSSTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTR 98          
BLAST of mRNA_M-pyrifera_M_contig122119.4549.1 vs. uniprot
Match: UPI001F043888 (ras-related protein Rab-38-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F043888)

HSP 1 Score: 99.8 bits (247), Expect = 2.190e-24
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    6 IRRYVQDKFVASYKSTIGLDFSVKNIKWDESSEVVLQLWDIAGQERFRNMTRSYYKGAVGAIVVFDVTR 74
            IR+YV  KF  +YK+TIG DF++K++ WDE+  + LQLWDIAGQERF  MTR YY+GAVGA VVFDV+R
Sbjct:   29 IRQYVSQKFFINYKATIGSDFAIKDLDWDENLRIKLQLWDIAGQERFSCMTRVYYRGAVGAFVVFDVSR 97          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122119.4549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1YEB3_9EUKA1.710e-2671.43Ras-related protein Rab (Fragment) n=1 Tax=Sexangu... [more]
A0A0B7MYN4_9FUNG1.270e-2571.43Ras-related protein Rab n=4 Tax=Mucoraceae TaxID=3... [more]
A0A7S4MNH4_9EUKA1.290e-2572.86Ras-related protein Rab n=1 Tax=Vannella sp. CB-20... [more]
UPI0015B0903B4.700e-2570.00ras-related protein Rab-32 n=1 Tax=Anguilla anguil... [more]
L8HHC7_ACACA5.270e-2568.57Ras-related protein Rab n=1 Tax=Acanthamoeba caste... [more]
UPI001AAD88FA6.950e-2570.00ras-related protein Rab-32 isoform X2 n=2 Tax=Rano... [more]
A0A1S3AHG3_ERIEU1.320e-2464.29Ras-related protein Rab n=1 Tax=Erinaceus europaeu... [more]
UPI0008708CE32.030e-2465.71ras-related protein Rab-32 n=1 Tax=Galendromus occ... [more]
M3XLF6_LATCH2.160e-2468.57Ras-related protein Rab n=2 Tax=Latimeria chalumna... [more]
UPI001F0438882.190e-2465.22ras-related protein Rab-38-like n=1 Tax=Xenia sp. ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 32..54
score: 39.59
coord: 13..29
score: 35.87
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 5..74
e-value: 7.3E-5
score: -49.0
NoneNo IPR availableGENE3D3.40.50.300coord: 4..74
e-value: 4.6E-24
score: 86.6
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 4..74
NoneNo IPR availablePANTHERPTHR24073:SF839RAS-RELATED PROTEIN RAB-38coord: 4..74
NoneNo IPR availablePROSITEPS51419RABcoord: 1..74
score: 16.74
IPR001806Small GTPasePFAMPF00071Rascoord: 5..73
e-value: 7.0E-22
score: 77.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122119contigM-pyrifera_M_contig122119:114..527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122119.4549.1mRNA_M-pyrifera_M_contig122119.4549.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122119 114..527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122119.4549.1 ID=prot_M-pyrifera_M_contig122119.4549.1|Name=mRNA_M-pyrifera_M_contig122119.4549.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp
RHAGIIRRYVQDKFVASYKSTIGLDFSVKNIKWDESSEVVLQLWDIAGQE
RFRNMTRSYYKGAVGAIVVFDVTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase