prot_M-pyrifera_M_contig120837.4289.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig120837.4289.1
Unique Name	prot_M-pyrifera_M_contig120837.4289.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	59

Homology

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BLAST of mRNA_M-pyrifera_M_contig120837.4289.1 vs. uniprot
Match: A0A7C8ALP4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C8ALP4_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 1.590e-11
Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 0

Query:    1 MTSNSYDSTRQRNVLLGCLFWVAFAFVAVLVRGVSWDETYEHALAITGIAPYPDGHPFY 59
            M  N    +R R +  G   WV FA +A+ +RGV WDET+EHA  +TG  PYP+GHP +
Sbjct:    1 MNENEKHPSR-RAIAFGIALWVVFAIIAIGIRGVRWDETFEHAQVLTGQTPYPEGHPLF 58

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BLAST of mRNA_M-pyrifera_M_contig120837.4289.1 vs. uniprot
Match: A0A2A5E664_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5E664_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 4.400e-9
Identity = 27/58 (46.55%), Postives = 33/58 (56.90%), Query Frame = 0

Query:    2 TSNSYDSTRQRNVLLGCLFWVAFAFVAVLVRGVSWDETYEHALAITGIAPYPDGHPFY 59
            T N   +   R +    LFW+ F  VAVLVRG+ WDET+E A  +TG   YP  HP Y
Sbjct:    8 TENRAYTLTDRRIQYSLLFWLLFCLVAVLVRGIRWDETHEWAQIMTGDVVYPHDHPHY 65

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig120837.4289.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig120837.4289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A7C8ALP4_9BACT	1.590e-11	47.46	Uncharacterized protein n=1 Tax=Candidatus Hydroge...	[more]
A0A2A5E664_9BACT	4.400e-9	46.55	Uncharacterized protein n=1 Tax=Candidatus Hydroge...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..59
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig120837	contig	M-pyrifera_M_contig120837:5..181 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig120837.4289.1	mRNA_M-pyrifera_M_contig120837.4289.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig120837 5..181 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig120837.4289.1 ID=prot_M-pyrifera_M_contig120837.4289.1|Name=mRNA_M-pyrifera_M_contig120837.4289.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=59bp
MTSNSYDSTRQRNVLLGCLFWVAFAFVAVLVRGVSWDETYEHALAITGIA
PYPDGHPFY