prot_M-pyrifera_M_contig118557.3834.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118557.3834.1
Unique Nameprot_M-pyrifera_M_contig118557.3834.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length178
Homology
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A5A8DW00_CAFRO (MCM domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DW00_CAFRO)

HSP 1 Score: 202 bits (515), Expect = 4.810e-58
Identity = 97/178 (54.49%), Postives = 133/178 (74.72%), Query Frame = 0
Query:    1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 178
            CK R FR++E +V R D+QEV+IQE    LGVGS+PR+I V L+ D+VD CKAGD+ +VTGT+ RRWSR+A+GARCDLE+++KA+HV+++S    GG+    V  +L  DF+ FWEYF+   +PL AR+++LRS+ P L+GM  VK A+AL LAGGVG    +SG   RG++HLL+VG
Sbjct:  213 CKGRSFRLIEESVVRTDYQEVKIQEQAHTLGVGSIPRSIVVALEHDLVDTCKAGDDAVVTGTLTRRWSRIARGARCDLEVLIKANHVRIISDSHAGGI----VTDELREDFERFWEYFEAKGQPLRARNILLRSINPQLHGMFVVKQAVALTLAGGVGRVDGQSGTTVRGDAHLLMVG 386          
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A5A8CLM3_CAFRO (MCM domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CLM3_CAFRO)

HSP 1 Score: 202 bits (515), Expect = 2.680e-57
Identity = 97/178 (54.49%), Postives = 133/178 (74.72%), Query Frame = 0
Query:    1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 178
            CK R FR++E +V R D+QEV+IQE    LGVGS+PR+I V L+ D+VD CKAGD+ +VTGT+ RRWSR+A+GARCDLE+++KA+HV+++S    GG+    V  +L  DF+ FWEYF+   +PL AR+++LRS+ P L+GM  VK A+AL LAGGVG    +SG   RG++HLL+VG
Sbjct:  221 CKGRSFRLIEESVVRTDYQEVKIQEQAHTLGVGSIPRSIVVALEHDLVDTCKAGDDAVVTGTLTRRWSRIARGARCDLEVLIKANHVRIISDSHAGGI----VTDELREDFERFWEYFEAKGQPLRARNILLRSINPQLHGMFVVKQAVALTLAGGVGRVDGQSGTTVRGDAHLLMVG 394          
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A812ZUJ1_9DINO (Mcm9 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812ZUJ1_9DINO)

HSP 1 Score: 189 bits (480), Expect = 2.200e-52
Identity = 93/178 (52.25%), Postives = 127/178 (71.35%), Query Frame = 0
Query:    1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 178
            CK R FR++E +V R D+QEV+IQE    LGVGS+PR+I V L+ D+VD CKAGD+ +VTGT+ RRWSR+A+GARCDLE+++KA+H +     G    S ++       DF+ FWEYF+   +PL AR+++LRS+ P L+GM  VK A+AL LAGGVG    +SG   RG++HLL+VG
Sbjct:  128 CKGRSFRLIEESVVRTDYQEVKIQEQAHTLGVGSIPRSIVVALEHDLVDTCKAGDDAVVTGTLTRRWSRIARGARCDLEVLIKANHAKAA---GRSFASWQAGCQRAPDDFERFWEYFEAKGQPLRARNILLRSINPQLHGMFVVKQAVALTLAGGVGRVDGQSGTTVRGDAHLLMVG 302          
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A812KKZ6_9DINO (Mcm9 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KKZ6_9DINO)

HSP 1 Score: 177 bits (448), Expect = 4.650e-49
Identity = 95/180 (52.78%), Postives = 123/180 (68.33%), Query Frame = 0
Query:    1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSG--DGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 178
            C    F + E    RID+QE+RIQE V+++ VGS+PR++ VVLQ D+VD  KAGD+V++ G + RRW R++ GARCD+E V+KA+ +  + G  D P       VP   + DF DFW YF+TA  PL  RDVILRS+CP L GM  VKLA+AL LAGGVG+    +GA +RGE HLLLVG
Sbjct:  125 CPGSTFTLQEAETVRIDYQEIRIQEAVRSVDVGSIPRSLCVVLQHDLVDTVKAGDDVMLGGIIARRWRRISPGARCDVESVMKANSITSVGGSIDSPHS---GQVPEQAIRDFADFWAYFRTA--PLRGRDVILRSICPQLCGMRVVKLAVALTLAGGVGYRDD-AGAASRGEPHLLLVG 298          
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A821BR15_9NEOB ((mimic poison frog) hypothetical protein (Fragment) n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821BR15_9NEOB)

HSP 1 Score: 152 bits (383), Expect = 1.910e-42
Identity = 82/162 (50.62%), Postives = 114/162 (70.37%), Query Frame = 0
Query:   17 DHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 178
            D+QE++IQE VQ L VGS+PR++ VVL+ D+VD CK+GD+V V G V++RW  +   ARCDLE+VLKA+++ V + + P GV +     D+  ++++FWE F+    PL  R+ IL S+CP + GM  VKLA+A+ LAGGV  T   +G R RGESHLLLVG
Sbjct:   90 DYQEIKIQEQVQRLSVGSIPRSMIVVLEDDLVDSCKSGDDVTVYGVVMQRWKPLYVDARCDLELVLKANYISV-NNEQPCGVVINE---DIRKEYEEFWERFKN--NPLEGRNEILASLCPQVFGMFVVKLAVAMVLAGGVQRTDS-AGTRVRGESHLLLVG 244          
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A388M6Q5_CHABU (DNA helicase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M6Q5_CHABU)

HSP 1 Score: 160 bits (405), Expect = 2.850e-42
Identity = 89/178 (50.00%), Postives = 125/178 (70.22%), Query Frame = 0
Query:    1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 178
            CK   F++VEG+V R D+QEV+IQE VQ LG+GS+PR+I +VL+ D+VDV KAGD+V VTG ++ RW  ++  ARCD+++VLKA+++  L+       S+  V  ++V  F +FW+    A+RP+  R+ ILR++CP + G+ TVKLA+AL L GGV      SG R RGESHLLLVG
Sbjct:  228 CKGTRFKLVEGSVRRRDYQEVKIQEQVQALGMGSVPRSIPLVLEDDLVDVIKAGDDVAVTGVLLTRWRSVSVEARCDVDLVLKANNLTKLNECK----SVVDVSEEMVEQFGEFWKTH--AERPMKGRNEILRAICPQVFGLFTVKLAVALTLIGGVPRVDG-SGTRIRGESHLLLVG 398          
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: D8R028_SELML (DNA helicase (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R028_SELML)

HSP 1 Score: 154 bits (389), Expect = 9.280e-42
Identity = 83/178 (46.63%), Postives = 116/178 (65.17%), Query Frame = 0
Query:    1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 178
            C    FR +E +    D+QE+++QE++Q LGVGS+PR+I  +LQ D+VD  +AGD+V+ TG +  RW R  K ARCD+EI+L+  +V+  + D    V    VP D++  F+ FW+ F+ A  P   R+ IL+S+CP + G+ TVKLA+AL L GGV      SG R RGESHLLLVG
Sbjct:   65 CTGSTFRCIEDSKVSHDYQEIKMQENLQTLGVGSVPRSIVAILQDDLVDTVQAGDDVVATGELFSRWRRSCKDARCDIEIMLRVHYVRK-ANDLKAAVD---VPEDVIHQFEQFWKEFERA--PFKGRNAILQSICPQVYGLFTVKLAVALTLVGGV-QRVDSSGTRIRGESHLLLVG 235          
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: UPI00071C5E44 (DNA helicase MCM9 isoform X2 n=1 Tax=Calidris pugnax TaxID=198806 RepID=UPI00071C5E44)

HSP 1 Score: 152 bits (385), Expect = 2.670e-41
Identity = 86/182 (47.25%), Postives = 117/182 (64.29%), Query Frame = 0
Query:    1 CKCRDFRIVEGTVDRI----DHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 178
            C    F  + GT        D+QE++IQE VQ L VGS+PR + VVL+ D+VD CK+GD++ V G V++RW    +GARCDLE+VLKA++V+V +    G V    +  ++  +F+DFWE  +    PL  R+ IL S+CP + G+  VKLA+A+ LAGGV  T   SG R RGESHLLLVG
Sbjct:  191 CNSTKFTCLSGTTSSPTCCRDYQEIKIQEQVQRLSVGSIPRCMVVVLEDDLVDSCKSGDDITVYGVVMQRWKPFHEGARCDLELVLKANYVKVNNEQLAGVV----IDEEIRKEFEDFWEKHRND--PLAGRNEILASLCPQVFGLYVVKLAVAMVLAGGVQRTDA-SGTRIRGESHLLLVG 365          
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: S8E276_9LAMI (DNA helicase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E276_9LAMI)

HSP 1 Score: 147 bits (370), Expect = 3.450e-41
Identity = 81/178 (45.51%), Postives = 118/178 (66.29%), Query Frame = 0
Query:    1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 178
            C+   F++VE      D+QE++IQE  Q LGVG++PR+I V+L+ D+VD+ KAGD+++VTG +  +WS  AK  RCDLE VL A++V+  + D    ++   +P +++  F+ FW  F+    PL  R++ILR +CP + G+ TVKLA+AL L GGV      SG + RGESHLLLVG
Sbjct:    2 CESSRFQLVEDQRICHDYQEIKIQESTQVLGVGAIPRSILVILKDDLVDIVKAGDDIIVTGVLTAKWSSEAKDVRCDLEPVLLANNVR-RTNDLKSEIN---IPGEMMVKFKQFWSEFKDT--PLKGRNMILRGICPQVFGLFTVKLAVALTLIGGVPHVGA-SGTKVRGESHLLLVG 172          
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A7J7GS82_CAMSI (DNA helicase n=3 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GS82_CAMSI)

HSP 1 Score: 155 bits (393), Expect = 4.580e-41
Identity = 84/181 (46.41%), Postives = 121/181 (66.85%), Query Frame = 0
Query:    1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRS---VPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 178
            C+   F+ VEGT    D+QE++IQE  Q LGVG++PR+I V+L  D+VD+ KAGD+V+VTG ++ +WS   K  RCDL+ VL A+HV+ ++        L++   +P D+++ F++FW  F+    PL  R+ ILR +CP + G+ TVKLA+AL L GGV   +  SG + RGESHLLLVG
Sbjct:  184 CESISFQFVEGTTICHDYQEIKIQESTQVLGVGAIPRSIPVILMDDLVDIVKAGDDVIVTGVLIAKWSSDLKDVRCDLDPVLIANHVRRIN-------ELKTDIDIPDDVINQFKNFWLNFKDT--PLKGRNAILRGICPQIFGLFTVKLAVALTLIGGV-QHADASGTKVRGESHLLLVG 354          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DW00_CAFRO4.810e-5854.49MCM domain-containing protein n=1 Tax=Cafeteria ro... [more]
A0A5A8CLM3_CAFRO2.680e-5754.49MCM domain-containing protein n=2 Tax=Cafeteria ro... [more]
A0A812ZUJ1_9DINO2.200e-5252.25Mcm9 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A81... [more]
A0A812KKZ6_9DINO4.650e-4952.78Mcm9 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A821BR15_9NEOB1.910e-4250.62(mimic poison frog) hypothetical protein (Fragment... [more]
A0A388M6Q5_CHABU2.850e-4250.00DNA helicase n=1 Tax=Chara braunii TaxID=69332 Rep... [more]
D8R028_SELML9.280e-4246.63DNA helicase (Fragment) n=1 Tax=Selaginella moelle... [more]
UPI00071C5E442.670e-4147.25DNA helicase MCM9 isoform X2 n=1 Tax=Calidris pugn... [more]
S8E276_9LAMI3.450e-4145.51DNA helicase (Fragment) n=1 Tax=Genlisea aurea Tax... [more]
A0A7J7GS82_CAMSI4.580e-4146.41DNA helicase n=3 Tax=Camellia sinensis TaxID=4442 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033762MCM OB domainPFAMPF17207MCM_OBcoord: 4..63
e-value: 4.5E-13
score: 49.1
NoneNo IPR availableGENE3D2.20.28.10coord: 2..12
e-value: 5.6E-21
score: 76.6
NoneNo IPR availableGENE3D3.40.50.300coord: 115..178
e-value: 4.4E-8
score: 34.6
NoneNo IPR availableGENE3D2.40.50.140coord: 13..82
e-value: 5.6E-21
score: 76.6
NoneNo IPR availablePANTHERPTHR11630:SF48DNA HELICASE MCM9coord: 1..178
IPR001208MCM domainPFAMPF00493MCMcoord: 126..178
e-value: 7.4E-6
score: 25.2
IPR031327Mini-chromosome maintenance proteinPANTHERPTHR11630DNA REPLICATION LICENSING FACTORcoord: 1..178
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118557contigM-pyrifera_M_contig118557:14..547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118557.3834.1mRNA_M-pyrifera_M_contig118557.3834.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118557 14..547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118557.3834.1 ID=prot_M-pyrifera_M_contig118557.3834.1|Name=mRNA_M-pyrifera_M_contig118557.3834.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp
CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDV
CKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSL
RSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALA
LALAGGVGWTSQKSGARARGESHLLLVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033762MCM_OB
IPR001208MCM_dom
IPR031327MCM
IPR012340NA-bd_OB-fold