mRNA_M-pyrifera_M_contig118557.3834.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A5A8DW00_CAFRO (MCM domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DW00_CAFRO) HSP 1 Score: 202 bits (515), Expect = 4.810e-58 Identity = 97/178 (54.49%), Postives = 133/178 (74.72%), Query Frame = 1
Query: 1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 534
CK R FR++E +V R D+QEV+IQE LGVGS+PR+I V L+ D+VD CKAGD+ +VTGT+ RRWSR+A+GARCDLE+++KA+HV+++S GG+ V +L DF+ FWEYF+ +PL AR+++LRS+ P L+GM VK A+AL LAGGVG +SG RG++HLL+VG
Sbjct: 213 CKGRSFRLIEESVVRTDYQEVKIQEQAHTLGVGSIPRSIVVALEHDLVDTCKAGDDAVVTGTLTRRWSRIARGARCDLEVLIKANHVRIISDSHAGGI----VTDELREDFERFWEYFEAKGQPLRARNILLRSINPQLHGMFVVKQAVALTLAGGVGRVDGQSGTTVRGDAHLLMVG 386
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A5A8CLM3_CAFRO (MCM domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CLM3_CAFRO) HSP 1 Score: 202 bits (515), Expect = 2.680e-57 Identity = 97/178 (54.49%), Postives = 133/178 (74.72%), Query Frame = 1
Query: 1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 534
CK R FR++E +V R D+QEV+IQE LGVGS+PR+I V L+ D+VD CKAGD+ +VTGT+ RRWSR+A+GARCDLE+++KA+HV+++S GG+ V +L DF+ FWEYF+ +PL AR+++LRS+ P L+GM VK A+AL LAGGVG +SG RG++HLL+VG
Sbjct: 221 CKGRSFRLIEESVVRTDYQEVKIQEQAHTLGVGSIPRSIVVALEHDLVDTCKAGDDAVVTGTLTRRWSRIARGARCDLEVLIKANHVRIISDSHAGGI----VTDELREDFERFWEYFEAKGQPLRARNILLRSINPQLHGMFVVKQAVALTLAGGVGRVDGQSGTTVRGDAHLLMVG 394
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A812ZUJ1_9DINO (Mcm9 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812ZUJ1_9DINO) HSP 1 Score: 189 bits (480), Expect = 2.200e-52 Identity = 93/178 (52.25%), Postives = 127/178 (71.35%), Query Frame = 1
Query: 1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 534
CK R FR++E +V R D+QEV+IQE LGVGS+PR+I V L+ D+VD CKAGD+ +VTGT+ RRWSR+A+GARCDLE+++KA+H + G S ++ DF+ FWEYF+ +PL AR+++LRS+ P L+GM VK A+AL LAGGVG +SG RG++HLL+VG
Sbjct: 128 CKGRSFRLIEESVVRTDYQEVKIQEQAHTLGVGSIPRSIVVALEHDLVDTCKAGDDAVVTGTLTRRWSRIARGARCDLEVLIKANHAKAA---GRSFASWQAGCQRAPDDFERFWEYFEAKGQPLRARNILLRSINPQLHGMFVVKQAVALTLAGGVGRVDGQSGTTVRGDAHLLMVG 302
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A812KKZ6_9DINO (Mcm9 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KKZ6_9DINO) HSP 1 Score: 177 bits (448), Expect = 4.650e-49 Identity = 95/180 (52.78%), Postives = 123/180 (68.33%), Query Frame = 1
Query: 1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSG--DGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 534
C F + E RID+QE+RIQE V+++ VGS+PR++ VVLQ D+VD KAGD+V++ G + RRW R++ GARCD+E V+KA+ + + G D P VP + DF DFW YF+TA PL RDVILRS+CP L GM VKLA+AL LAGGVG+ +GA +RGE HLLLVG
Sbjct: 125 CPGSTFTLQEAETVRIDYQEIRIQEAVRSVDVGSIPRSLCVVLQHDLVDTVKAGDDVMLGGIIARRWRRISPGARCDVESVMKANSITSVGGSIDSPHS---GQVPEQAIRDFADFWAYFRTA--PLRGRDVILRSICPQLCGMRVVKLAVALTLAGGVGYRDD-AGAASRGEPHLLLVG 298
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A821BR15_9NEOB ((mimic poison frog) hypothetical protein (Fragment) n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821BR15_9NEOB) HSP 1 Score: 152 bits (383), Expect = 1.910e-42 Identity = 82/162 (50.62%), Postives = 114/162 (70.37%), Query Frame = 1
Query: 49 DHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 534
D+QE++IQE VQ L VGS+PR++ VVL+ D+VD CK+GD+V V G V++RW + ARCDLE+VLKA+++ V + + P GV + D+ ++++FWE F+ PL R+ IL S+CP + GM VKLA+A+ LAGGV T +G R RGESHLLLVG
Sbjct: 90 DYQEIKIQEQVQRLSVGSIPRSMIVVLEDDLVDSCKSGDDVTVYGVVMQRWKPLYVDARCDLELVLKANYISV-NNEQPCGVVINE---DIRKEYEEFWERFKN--NPLEGRNEILASLCPQVFGMFVVKLAVAMVLAGGVQRTDS-AGTRVRGESHLLLVG 244
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A388M6Q5_CHABU (DNA helicase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M6Q5_CHABU) HSP 1 Score: 160 bits (405), Expect = 2.850e-42 Identity = 89/178 (50.00%), Postives = 125/178 (70.22%), Query Frame = 1
Query: 1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 534
CK F++VEG+V R D+QEV+IQE VQ LG+GS+PR+I +VL+ D+VDV KAGD+V VTG ++ RW ++ ARCD+++VLKA+++ L+ S+ V ++V F +FW+ A+RP+ R+ ILR++CP + G+ TVKLA+AL L GGV SG R RGESHLLLVG
Sbjct: 228 CKGTRFKLVEGSVRRRDYQEVKIQEQVQALGMGSVPRSIPLVLEDDLVDVIKAGDDVAVTGVLLTRWRSVSVEARCDVDLVLKANNLTKLNECK----SVVDVSEEMVEQFGEFWKTH--AERPMKGRNEILRAICPQVFGLFTVKLAVALTLIGGVPRVDG-SGTRIRGESHLLLVG 398
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: D8R028_SELML (DNA helicase (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R028_SELML) HSP 1 Score: 154 bits (389), Expect = 9.280e-42 Identity = 83/178 (46.63%), Postives = 116/178 (65.17%), Query Frame = 1
Query: 1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 534
C FR +E + D+QE+++QE++Q LGVGS+PR+I +LQ D+VD +AGD+V+ TG + RW R K ARCD+EI+L+ +V+ + D V VP D++ F+ FW+ F+ A P R+ IL+S+CP + G+ TVKLA+AL L GGV SG R RGESHLLLVG
Sbjct: 65 CTGSTFRCIEDSKVSHDYQEIKMQENLQTLGVGSVPRSIVAILQDDLVDTVQAGDDVVATGELFSRWRRSCKDARCDIEIMLRVHYVRK-ANDLKAAVD---VPEDVIHQFEQFWKEFERA--PFKGRNAILQSICPQVYGLFTVKLAVALTLVGGV-QRVDSSGTRIRGESHLLLVG 235
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: UPI00071C5E44 (DNA helicase MCM9 isoform X2 n=1 Tax=Calidris pugnax TaxID=198806 RepID=UPI00071C5E44) HSP 1 Score: 152 bits (385), Expect = 2.670e-41 Identity = 86/182 (47.25%), Postives = 117/182 (64.29%), Query Frame = 1
Query: 1 CKCRDFRIVEGTVDRI----DHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 534
C F + GT D+QE++IQE VQ L VGS+PR + VVL+ D+VD CK+GD++ V G V++RW +GARCDLE+VLKA++V+V + G V + ++ +F+DFWE + PL R+ IL S+CP + G+ VKLA+A+ LAGGV T SG R RGESHLLLVG
Sbjct: 191 CNSTKFTCLSGTTSSPTCCRDYQEIKIQEQVQRLSVGSIPRCMVVVLEDDLVDSCKSGDDITVYGVVMQRWKPFHEGARCDLELVLKANYVKVNNEQLAGVV----IDEEIRKEFEDFWEKHRND--PLAGRNEILASLCPQVFGLYVVKLAVAMVLAGGVQRTDA-SGTRIRGESHLLLVG 365
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: S8E276_9LAMI (DNA helicase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E276_9LAMI) HSP 1 Score: 147 bits (370), Expect = 3.450e-41 Identity = 81/178 (45.51%), Postives = 118/178 (66.29%), Query Frame = 1
Query: 1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRSVPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 534
C+ F++VE D+QE++IQE Q LGVG++PR+I V+L+ D+VD+ KAGD+++VTG + +WS AK RCDLE VL A++V+ + D ++ +P +++ F+ FW F+ PL R++ILR +CP + G+ TVKLA+AL L GGV SG + RGESHLLLVG
Sbjct: 2 CESSRFQLVEDQRICHDYQEIKIQESTQVLGVGAIPRSILVILKDDLVDIVKAGDDIIVTGVLTAKWSSEAKDVRCDLEPVLLANNVR-RTNDLKSEIN---IPGEMMVKFKQFWSEFKDT--PLKGRNMILRGICPQVFGLFTVKLAVALTLIGGVPHVGA-SGTKVRGESHLLLVG 172
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Match: A0A7J7GS82_CAMSI (DNA helicase n=3 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GS82_CAMSI) HSP 1 Score: 155 bits (393), Expect = 4.580e-41 Identity = 84/181 (46.41%), Postives = 121/181 (66.85%), Query Frame = 1
Query: 1 CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVCKAGDEVLVTGTVVRRWSRMAKGARCDLEIVLKADHVQVLSGDGPGGVSLRS---VPSDLVSDFQDFWEYFQTAKRPLTARDVILRSVCPTLNGMATVKLALALALAGGVGWTSQKSGARARGESHLLLVG 534
C+ F+ VEGT D+QE++IQE Q LGVG++PR+I V+L D+VD+ KAGD+V+VTG ++ +WS K RCDL+ VL A+HV+ ++ L++ +P D+++ F++FW F+ PL R+ ILR +CP + G+ TVKLA+AL L GGV + SG + RGESHLLLVG
Sbjct: 184 CESISFQFVEGTTICHDYQEIKIQESTQVLGVGAIPRSIPVILMDDLVDIVKAGDDVIVTGVLIAKWSSDLKDVRCDLDPVLIANHVRRIN-------ELKTDIDIPDDVINQFKNFWLNFKDT--PLKGRNAILRGICPQIFGLFTVKLAVALTLIGGV-QHADASGTKVRGESHLLLVG 354 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118557.3834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118557.3834.1 >prot_M-pyrifera_M_contig118557.3834.1 ID=prot_M-pyrifera_M_contig118557.3834.1|Name=mRNA_M-pyrifera_M_contig118557.3834.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp CKCRDFRIVEGTVDRIDHQEVRIQEHVQNLGVGSMPRAIAVVLQQDMVDVback to top mRNA from alignment at M-pyrifera_M_contig118557:14..547+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118557.3834.1 ID=mRNA_M-pyrifera_M_contig118557.3834.1|Name=mRNA_M-pyrifera_M_contig118557.3834.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig118557:14..547+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118557:14..547+ >mRNA_M-pyrifera_M_contig118557.3834.1 ID=mRNA_M-pyrifera_M_contig118557.3834.1|Name=mRNA_M-pyrifera_M_contig118557.3834.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig118557:14..547+ (Macrocystis pyrifera P11B4 male)back to top |