prot_M-pyrifera_M_contig118349.3794.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118349.3794.1
Unique Nameprot_M-pyrifera_M_contig118349.3794.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length145
Homology
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BLAST of mRNA_M-pyrifera_M_contig118349.3794.1 vs. uniprot
Match: A5A9V2_CIOIN (Huntingtin like protein n=4 Tax=Ciona TaxID=7718 RepID=A5A9V2_CIOIN)

HSP 1 Score: 59.7 bits (143), Expect = 1.450e-7
Identity = 41/125 (32.80%), Postives = 69/125 (55.20%), Query Frame = 0 
Query:   22 VETLLDVITQGVKDSSTVTSNEACRAIEVVLPYLYTSPYSIHVLSIVSALTSFEHS-YWLIRCSVMQLLAKLDYSSIAYVEKEFLHNRGSRALPLYRDHQPLQERALNYIVKQLEDDNWRVADAA 145
            +E L+ +I  G+ D S+ T+ +AC A+   +  L  S Y  + L ++  +   + S YWLI+ S+++LLA L+Y  IAY+E   L  R + ++      Q L  +AL+  +K L DD+ R+   A
Sbjct:  589 IEDLISLIHGGLIDESSTTTRQACSAVTSCVHTLLNSMYFSYGLELLHMVVGLQSSTYWLIKVSLLELLASLNYRQIAYLE--LLSKRDAASVKT----QSLPHQALSIALKCLCDDDLRLRKTA 707
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BLAST of mRNA_M-pyrifera_M_contig118349.3794.1 vs. uniprot
Match: UPI00106BCF43 (LOW QUALITY PROTEIN: huntingtin-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BCF43)

HSP 1 Score: 58.5 bits (140), Expect = 3.650e-7
Identity = 34/108 (31.48%), Postives = 62/108 (57.41%), Query Frame = 0 
Query:    1 VIQSHFDIRR---DQC-LLSDQYVHVETLLDVITQGVKDSSTVTSNEACRAIEVVLPYLYTSPYSIHVLSIVSALTSF-EHSYWLIRCSVMQLLAKLDYSSIAYVEKE 103
            +++S +D      D C  L+  +V ++ LL V+ + + D S+ T   AC  ++  LP L  S Y+   L +   L    ++SYWL++C ++Q++  L+YS IA++EK+
Sbjct:  624 LVRSRYDFETWSSDVCDQLNTDHVKIDDLLGVLEKILLDDSSFTVKLACLGVQQCLPALCLSSYTTLTLQLCLKLVRLKQNSYWLVKCELLQIIGNLNYSLIAFLEKQ 731
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118349.3794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A5A9V2_CIOIN1.450e-732.80Huntingtin like protein n=4 Tax=Ciona TaxID=7718 R... [more]
UPI00106BCF433.650e-731.48LOW QUALITY PROTEIN: huntingtin-like n=1 Tax=Dendr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028426Huntingtin familyPANTHERPTHR10170HUNTINGTON DISEASE PROTEINcoord: 20..145
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 21..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118349contigM-pyrifera_M_contig118349:3..437 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118349.3794.1mRNA_M-pyrifera_M_contig118349.3794.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118349 3..437 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118349.3794.1 ID=prot_M-pyrifera_M_contig118349.3794.1|Name=mRNA_M-pyrifera_M_contig118349.3794.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
VIQSHFDIRRDQCLLSDQYVHVETLLDVITQGVKDSSTVTSNEACRAIEV
VLPYLYTSPYSIHVLSIVSALTSFEHSYWLIRCSVMQLLAKLDYSSIAYV
EKEFLHNRGSRALPLYRDHQPLQERALNYIVKQLEDDNWRVADAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028426Huntingtin_fam
IPR016024ARM-type_fold