prot_M-pyrifera_M_contig117686.3653.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117686.3653.1
Unique Nameprot_M-pyrifera_M_contig117686.3653.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length141
Homology
BLAST of mRNA_M-pyrifera_M_contig117686.3653.1 vs. uniprot
Match: A0A3D3RE00_9PLAN (Very short patch repair endonuclease n=2 Tax=Gimesia TaxID=1649453 RepID=A0A3D3RE00_9PLAN)

HSP 1 Score: 295 bits (756), Expect = 2.620e-101
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query:    1 MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVIIIWECETSDIDALARLLNESILHSMPYKQFHRRQSLSKSL 140
            MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVIIIWECETSDIDALARLLNESILHSMPYKQFHRRQSLSKSL
Sbjct:   14 MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVIIIWECETSDIDALARLLNESILHSMPYKQFHRRQSLSKSL 153          
BLAST of mRNA_M-pyrifera_M_contig117686.3653.1 vs. uniprot
Match: A0A517XIZ2_9PLAN (Very short patch repair endonuclease n=1 Tax=Gimesia maris TaxID=122 RepID=A0A517XIZ2_9PLAN)

HSP 1 Score: 205 bits (521), Expect = 8.650e-66
Identity = 90/117 (76.92%), Postives = 102/117 (87.18%), Query Frame = 0
Query:    1 MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVIIIWECETSDIDALARLL 117
            MSRIKNRDTKPELIVRSLL+RMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRV+FWK+KFA  ++RD    + L  +GW +I+IWECE  D++ L+  L
Sbjct:   14 MSRIKNRDTKPELIVRSLLYRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVNFWKRKFADTIERDKRQQQSLRKSGWNIIVIWECECMDLELLSNKL 130          
BLAST of mRNA_M-pyrifera_M_contig117686.3653.1 vs. uniprot
Match: A0A8D5FZI0_9DELT (Very short patch repair endonuclease n=1 Tax=Desulfomarina profundi TaxID=2772557 RepID=A0A8D5FZI0_9DELT)

HSP 1 Score: 192 bits (488), Expect = 5.850e-61
Identity = 85/119 (71.43%), Postives = 96/119 (80.67%), Query Frame = 0
Query:    1 MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVIIIWECETSDIDALARLLNE 119
            MSRIKNRDTKPE+IVRSLLHR GYRFRLHRKDLPGKPDIVLP+YKT+I VHGCFWHRH+GC+YAY PK+RVDFW+KKF  N KRD     EL   GWKV ++WECET   + L   L +
Sbjct:    1 MSRIKNRDTKPEIIVRSLLHRAGYRFRLHRKDLPGKPDIVLPRYKTIILVHGCFWHRHEGCRYAYYPKTRVDFWQKKFRQNAKRDQKVQNELLKLGWKVCVVWECETRKPEILISKLQQ 119          
BLAST of mRNA_M-pyrifera_M_contig117686.3653.1 vs. uniprot
Match: A0A7X9JCX6_9BACT (Very short patch repair endonuclease n=1 Tax=Candidatus Moranbacteria bacterium TaxID=2045217 RepID=A0A7X9JCX6_9BACT)

HSP 1 Score: 187 bits (476), Expect = 5.610e-59
Identity = 81/122 (66.39%), Postives = 100/122 (81.97%), Query Frame = 0
Query:    1 MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVIIIWECETSDIDALARLLNESIL 122
            MSRI + +TKPE+IVRSLLHRMGYRFRLH KDLPGKPDIVLPKY+TVIFVHGCFWHRH GC+YAY PKSR+ FW++KF+ N++RD  A  +LE   WKV+ +WECET ++ +L   L  +I+
Sbjct:   13 MSRIHSGNTKPEIIVRSLLHRMGYRFRLHSKDLPGKPDIVLPKYRTVIFVHGCFWHRHTGCRYAYTPKSRISFWEEKFSRNIERDHEAKDKLEIRNWKVLTVWECETRNVQSLIAKLRTNIV 134          
BLAST of mRNA_M-pyrifera_M_contig117686.3653.1 vs. uniprot
Match: A0A1G0LTE6_9DELT (Very short patch repair endonuclease n=2 Tax=Geobacteraceae TaxID=213422 RepID=A0A1G0LTE6_9DELT)

HSP 1 Score: 186 bits (472), Expect = 1.760e-58
Identity = 84/121 (69.42%), Postives = 96/121 (79.34%), Query Frame = 0
Query:    1 MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVIIIWECETSDIDALARLLNESI 121
            MSRIK R+TKPEL VRSLLHRMGYRFRLHR DLPGKPDIVL +Y+TVIFVHGCFWHRHK C++AY PKSR +FW KK  SNV RDI    +LE  GW+VI +WECE  D+D LA  L+  +
Sbjct:    1 MSRIKGRNTKPELAVRSLLHRMGYRFRLHRADLPGKPDIVLSRYRTVIFVHGCFWHRHKDCRFAYTPKSRTEFWLKKLESNVIRDIQVKSDLELLGWRVITLWECELRDMDQLAARLDADL 121          
BLAST of mRNA_M-pyrifera_M_contig117686.3653.1 vs. uniprot
Match: UPI000557CFA8 (DNA mismatch endonuclease Vsr n=1 Tax=Desulfobacter vibrioformis TaxID=34031 RepID=UPI000557CFA8)

HSP 1 Score: 185 bits (469), Expect = 6.740e-58
Identity = 81/109 (74.31%), Postives = 90/109 (82.57%), Query Frame = 0
Query:    1 MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVIIIWECETSD 109
            MSRIKNRDTKPE+ VRSLLHRMGYRFRLHRKDLPGKPDIVLPKY TVIFVHGCFWHRHK C +AY PKS + FW +KF  N++RD     ELE+ GW V IIWECE ++
Sbjct:   13 MSRIKNRDTKPEITVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYNTVIFVHGCFWHRHKNCHFAYTPKSNITFWTEKFEKNIRRDAKNKAELENLGWNVRIIWECEANN 121          
BLAST of mRNA_M-pyrifera_M_contig117686.3653.1 vs. uniprot
Match: A0A1H6F7B2_9GAMM (Very short patch repair protein n=1 Tax=Thiotrichales bacterium HS_08 TaxID=1899563 RepID=A0A1H6F7B2_9GAMM)

HSP 1 Score: 183 bits (464), Expect = 2.730e-57
Identity = 80/124 (64.52%), Postives = 95/124 (76.61%), Query Frame = 0
Query:    1 MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVIIIWECETSDIDALARLLNESILHS 124
            MS+IKN DTK E IVRSLLH  GYRFRL+RKDLPGKPDIVLPKYK +IFVHGCFWHRH+GC+YAY PKSR+DFW+ KF  N++ D      L   GW+V IIWECET  +D L ++++    HS
Sbjct:    1 MSQIKNCDTKKEKIVRSLLHHKGYRFRLYRKDLPGKPDIVLPKYKKIIFVHGCFWHRHEGCRYAYTPKSRIDFWENKFKKNIQHDKEVQSVLSELGWQVYIIWECETQKLDKLNKIIDSIFQHS 124          
BLAST of mRNA_M-pyrifera_M_contig117686.3653.1 vs. uniprot
Match: A0A7C5BIF2_9EURY (DNA mismatch endonuclease Vsr n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A7C5BIF2_9EURY)

HSP 1 Score: 183 bits (464), Expect = 3.890e-57
Identity = 80/118 (67.80%), Postives = 96/118 (81.36%), Query Frame = 0
Query:    1 MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVIIIWECETSDIDALARLLN 118
            MSRI+++DT PE +VRSLLHRMGYRFRLH K LPG PDIVLPK+KTVIFVHGCFWHRH GC++AY PKSRVDFW KKF  NVK    A  EL+  GW+V+++WEC+ S++D L R L+
Sbjct:   14 MSRIRSKDTGPEKVVRSLLHRMGYRFRLHVKSLPGTPDIVLPKFKTVIFVHGCFWHRHPGCRFAYTPKSRVDFWMKKFDQNVKAHEKAVGELKEQGWRVLVVWECDLSELDLLERKLS 131          
BLAST of mRNA_M-pyrifera_M_contig117686.3653.1 vs. uniprot
Match: A0A517YS29_9BACT (Very short patch repair endonuclease n=1 Tax=Poriferisphaera corsica TaxID=2528020 RepID=A0A517YS29_9BACT)

HSP 1 Score: 182 bits (463), Expect = 5.520e-57
Identity = 78/113 (69.03%), Postives = 97/113 (85.84%), Query Frame = 0
Query:    1 MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVIIIWECETSDIDAL 113
            MSRI++++TKPELIVRSLL++MGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGC+WHRH  CK AY PKS + FW+ KF+  +KRD   +K+++  GW+VIIIWECET++ + L
Sbjct:   14 MSRIRSKNTKPELIVRSLLYKMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCYWHRHADCKLAYKPKSHIHFWQNKFSKTIKRDRLRTKQIQDLGWRVIIIWECETANTEIL 126          
BLAST of mRNA_M-pyrifera_M_contig117686.3653.1 vs. uniprot
Match: A0A410H2P0_9GAMM (Very short patch repair endonuclease n=1 Tax=Hydrogenovibrio thermophilus TaxID=265883 RepID=A0A410H2P0_9GAMM)

HSP 1 Score: 180 bits (457), Expect = 4.980e-56
Identity = 85/121 (70.25%), Postives = 96/121 (79.34%), Query Frame = 0
Query:    1 MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFVHGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVIIIWECET--SDIDALARLLNE 119
            MSRI N+DTKPELIVR LLH+ GYRFRLHRKDLPGKPD+VLPKYKTVIFVHGCFWH H+GCK A  PK+R +FWKKK   NVKRD    + L+  GW VII+WECET  S++  LARL  E
Sbjct:   14 MSRISNKDTKPELIVRKLLHKNGYRFRLHRKDLPGKPDLVLPKYKTVIFVHGCFWHMHEGCKDAGIPKTRTEFWKKKLEENVKRDKKNIQLLKKLGWNVIIVWECETHNSEVQLLARLGKE 134          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117686.3653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D3RE00_9PLAN2.620e-101100.00Very short patch repair endonuclease n=2 Tax=Gimes... [more]
A0A517XIZ2_9PLAN8.650e-6676.92Very short patch repair endonuclease n=1 Tax=Gimes... [more]
A0A8D5FZI0_9DELT5.850e-6171.43Very short patch repair endonuclease n=1 Tax=Desul... [more]
A0A7X9JCX6_9BACT5.610e-5966.39Very short patch repair endonuclease n=1 Tax=Candi... [more]
A0A1G0LTE6_9DELT1.760e-5869.42Very short patch repair endonuclease n=2 Tax=Geoba... [more]
UPI000557CFA86.740e-5874.31DNA mismatch endonuclease Vsr n=1 Tax=Desulfobacte... [more]
A0A1H6F7B2_9GAMM2.730e-5764.52Very short patch repair protein n=1 Tax=Thiotricha... [more]
A0A7C5BIF2_9EURY3.890e-5767.80DNA mismatch endonuclease Vsr n=1 Tax=Euryarchaeot... [more]
A0A517YS29_9BACT5.520e-5769.03Very short patch repair endonuclease n=1 Tax=Porif... [more]
A0A410H2P0_9GAMM4.980e-5670.25Very short patch repair endonuclease n=1 Tax=Hydro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004603DNA mismatch endonuclease VSRPFAMPF03852Vsrcoord: 1..59
e-value: 3.7E-28
score: 97.2
IPR004603DNA mismatch endonuclease VSRPIRSFPIRSF018267VSR_endonuccoord: 1..134
e-value: 2.2E-53
score: 177.6
IPR004603DNA mismatch endonuclease VSRTIGRFAMTIGR00632TIGR00632coord: 1..106
e-value: 1.2E-41
score: 139.7
NoneNo IPR availableGENE3D3.40.960.10coord: 8..136
e-value: 3.7E-47
score: 161.1
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 1..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117686contigM-pyrifera_M_contig117686:122..544 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117686.3653.1mRNA_M-pyrifera_M_contig117686.3653.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117686 122..553 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117686.3653.1 ID=prot_M-pyrifera_M_contig117686.3653.1|Name=mRNA_M-pyrifera_M_contig117686.3653.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp
MSRIKNRDTKPELIVRSLLHRMGYRFRLHRKDLPGKPDIVLPKYKTVIFV
HGCFWHRHKGCKYAYNPKSRVDFWKKKFASNVKRDITASKELESNGWKVI
IIWECETSDIDALARLLNESILHSMPYKQFHRRQSLSKSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004603DNA_mismatch_endonuc_vsr
IPR011335Restrct_endonuc-II-like