prot_M-pyrifera_M_contig116381.3399.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116381.3399.1
Unique Nameprot_M-pyrifera_M_contig116381.3399.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length59
Homology
BLAST of mRNA_M-pyrifera_M_contig116381.3399.1 vs. uniprot
Match: A0A6A5BG92_NAEFO (TFIID_20kDa domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BG92_NAEFO)

HSP 1 Score: 82.8 bits (203), Expect = 6.650e-19
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0
Query:    4 LAEDFIESVTTFACGLAKHRKSDTLEVKDLKLHLEREWNISIPGF 48
            +A+DFIESVTTFAC LAKHR SDTLEVKDL+LHLE+ WN+ IPGF
Sbjct:   40 IADDFIESVTTFACSLAKHRGSDTLEVKDLQLHLEKNWNVKIPGF 84          
BLAST of mRNA_M-pyrifera_M_contig116381.3399.1 vs. uniprot
Match: A0A4P9XQP7_9FUNG (Transcription initiation factor TFIID subunit A-domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XQP7_9FUNG)

HSP 1 Score: 82.0 bits (201), Expect = 9.810e-19
Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 0
Query:    4 LAEDFIESVTTFACGLAKHRKSDTLEVKDLKLHLEREWNISIPGF 48
            +A++FIESVT FAC LAKHRKSDTLEVKDL+LHLER WNI IPGF
Sbjct:   34 VADEFIESVTAFACRLAKHRKSDTLEVKDLQLHLERNWNIRIPGF 78          
BLAST of mRNA_M-pyrifera_M_contig116381.3399.1 vs. uniprot
Match: A0A1C7NL44_9FUNG (Transcription initiation factor TFIID subunit 12 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NL44_9FUNG)

HSP 1 Score: 85.5 bits (210), Expect = 1.120e-18
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    4 LAEDFIESVTTFACGLAKHRKSDTLEVKDLKLHLEREWNISIPGFPCVRLPPLPSP 59
            +A++FIESVTTFAC LAKHRKSDTLEVKD++LHLER WNI IPGF    + PL  P
Sbjct:  186 IADEFIESVTTFACQLAKHRKSDTLEVKDVQLHLERNWNIRIPGFAADDIRPLRKP 241          
BLAST of mRNA_M-pyrifera_M_contig116381.3399.1 vs. uniprot
Match: A0A1X2HLF8_SYNRA (Transcription initiation factor TFIID subunit A-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HLF8_SYNRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.940e-18
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    4 LAEDFIESVTTFACGLAKHRKSDTLEVKDLKLHLEREWNISIPGF 48
            +A++FIES T FAC LAKHRKSDTLEVKDL+LHLER WNI IPGF
Sbjct:   46 IADEFIESTTAFACRLAKHRKSDTLEVKDLQLHLERNWNIRIPGF 90          
BLAST of mRNA_M-pyrifera_M_contig116381.3399.1 vs. uniprot
Match: I1BJ50_RHIO9 (TFIID_20kDa domain-containing protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BJ50_RHIO9)

HSP 1 Score: 85.5 bits (210), Expect = 3.340e-18
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    4 LAEDFIESVTTFACGLAKHRKSDTLEVKDLKLHLEREWNISIPGFPCVRLPPLPSP 59
            +A++FIESVTTFAC LAKHRKSDTLEVKD++LHLER WNI IPGF    + PL  P
Sbjct:  309 IADEFIESVTTFACRLAKHRKSDTLEVKDVQLHLERNWNIRIPGFAADDIRPLRKP 364          
BLAST of mRNA_M-pyrifera_M_contig116381.3399.1 vs. uniprot
Match: A0A0B7NDU9_9FUNG (TFIID_20kDa domain-containing protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NDU9_9FUNG)

HSP 1 Score: 85.5 bits (210), Expect = 3.490e-18
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    4 LAEDFIESVTTFACGLAKHRKSDTLEVKDLKLHLEREWNISIPGFPCVRLPPLPSP 59
            +A++FIESVTTFAC LAKHRKSDTLEVKD++LHLER WNI IPGF    + PL  P
Sbjct:  312 IADEFIESVTTFACQLAKHRKSDTLEVKDVQLHLERNWNIRIPGFAADDIRPLRKP 367          
BLAST of mRNA_M-pyrifera_M_contig116381.3399.1 vs. uniprot
Match: A0A1X0S9I0_RHIZD (TFIID_20kDa domain-containing protein n=4 Tax=Rhizopus TaxID=4842 RepID=A0A1X0S9I0_RHIZD)

HSP 1 Score: 85.5 bits (210), Expect = 3.510e-18
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    4 LAEDFIESVTTFACGLAKHRKSDTLEVKDLKLHLEREWNISIPGFPCVRLPPLPSP 59
            +A++FIESVTTFAC LAKHRKSDTLEVKD++LHLER WNI IPGF    + PL  P
Sbjct:  319 IADEFIESVTTFACRLAKHRKSDTLEVKDVQLHLERNWNIRIPGFAADDIRPLRKP 374          
BLAST of mRNA_M-pyrifera_M_contig116381.3399.1 vs. uniprot
Match: S2J475_MUCC1 (TFIID_20kDa domain-containing protein n=2 Tax=Mucor TaxID=4830 RepID=S2J475_MUCC1)

HSP 1 Score: 85.5 bits (210), Expect = 3.820e-18
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    4 LAEDFIESVTTFACGLAKHRKSDTLEVKDLKLHLEREWNISIPGFPCVRLPPLPSP 59
            +A++FIESVTTFAC LAKHRKSDTLEVKD++LHLER WNI IPGF    + PL  P
Sbjct:  332 IADEFIESVTTFACQLAKHRKSDTLEVKDVQLHLERNWNIRIPGFAADDIRPLRKP 387          
BLAST of mRNA_M-pyrifera_M_contig116381.3399.1 vs. uniprot
Match: A0A0C9MY18_9FUNG (Transcription initiation factor TFIID subunit 12 isoform X2 n=1 Tax=Mucor ambiguus TaxID=91626 RepID=A0A0C9MY18_9FUNG)

HSP 1 Score: 85.5 bits (210), Expect = 3.840e-18
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    4 LAEDFIESVTTFACGLAKHRKSDTLEVKDLKLHLEREWNISIPGFPCVRLPPLPSP 59
            +A++FIESVTTFAC LAKHRKSDTLEVKD++LHLER WNI IPGF    + PL  P
Sbjct:  333 IADEFIESVTTFACQLAKHRKSDTLEVKDVQLHLERNWNIRIPGFAADDIRPLRKP 388          
BLAST of mRNA_M-pyrifera_M_contig116381.3399.1 vs. uniprot
Match: A0A8H7RQF5_9FUNG (TFIID_20kDa domain-containing protein n=2 Tax=Mucor TaxID=4830 RepID=A0A8H7RQF5_9FUNG)

HSP 1 Score: 85.5 bits (210), Expect = 3.870e-18
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    4 LAEDFIESVTTFACGLAKHRKSDTLEVKDLKLHLEREWNISIPGFPCVRLPPLPSP 59
            +A++FIESVTTFAC LAKHRKSDTLEVKD++LHLER WNI IPGF    + PL  P
Sbjct:  335 IADEFIESVTTFACQLAKHRKSDTLEVKDVQLHLERNWNIRIPGFAADDIRPLRKP 390          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116381.3399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A5BG92_NAEFO6.650e-1980.00TFIID_20kDa domain-containing protein n=2 Tax=Naeg... [more]
A0A4P9XQP7_9FUNG9.810e-1982.22Transcription initiation factor TFIID subunit A-do... [more]
A0A1C7NL44_9FUNG1.120e-1871.43Transcription initiation factor TFIID subunit 12 n... [more]
A0A1X2HLF8_SYNRA2.940e-1880.00Transcription initiation factor TFIID subunit A-do... [more]
I1BJ50_RHIO93.340e-1871.43TFIID_20kDa domain-containing protein n=1 Tax=Rhiz... [more]
A0A0B7NDU9_9FUNG3.490e-1871.43TFIID_20kDa domain-containing protein n=1 Tax=Para... [more]
A0A1X0S9I0_RHIZD3.510e-1871.43TFIID_20kDa domain-containing protein n=4 Tax=Rhiz... [more]
S2J475_MUCC13.820e-1871.43TFIID_20kDa domain-containing protein n=2 Tax=Muco... [more]
A0A0C9MY18_9FUNG3.840e-1871.43Transcription initiation factor TFIID subunit 12 i... [more]
A0A8H7RQF5_9FUNG3.870e-1871.43TFIID_20kDa domain-containing protein n=2 Tax=Muco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..45
e-value: 6.8E-20
score: 73.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..45
IPR003228Transcription initiation factor TFIID subunit 12 domainPFAMPF03847TFIID_20kDacoord: 1..43
e-value: 2.4E-20
score: 72.8
IPR037794Transcription initiation factor TFIID subunit 12PANTHERPTHR12264FAMILY NOT NAMEDcoord: 4..48
NoneNo IPR availablePANTHERPTHR12264:SF21TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12coord: 4..48
NoneNo IPR availablePRODOMPD012998coord: 1..55
e-value: 5.0E-15
score: 191.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116381contigM-pyrifera_M_contig116381:306..482 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116381.3399.1mRNA_M-pyrifera_M_contig116381.3399.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116381 306..485 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116381.3399.1 ID=prot_M-pyrifera_M_contig116381.3399.1|Name=mRNA_M-pyrifera_M_contig116381.3399.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=59bp
MTALAEDFIESVTTFACGLAKHRKSDTLEVKDLKLHLEREWNISIPGFPC
VRLPPLPSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003228TFIID_TAF12_dom
IPR037794TAF12