prot_M-pyrifera_M_contig116196.3362.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116196.3362.1
Unique Nameprot_M-pyrifera_M_contig116196.3362.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length94
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116196.3362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007317Golgi to ER traffic protein 4PFAMPF04190DUF410coord: 34..81
e-value: 3.0E-8
score: 33.8
IPR007317Golgi to ER traffic protein 4PANTHERPTHR12875UNCHARACTERIZEDcoord: 5..81
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..90
e-value: 1.2E-18
score: 69.5
NoneNo IPR availablePANTHERPTHR12875:SF0GOLGI TO ER TRAFFIC PROTEIN 4 HOMOLOGcoord: 5..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116196contigM-pyrifera_M_contig116196:127..408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116196.3362.1mRNA_M-pyrifera_M_contig116196.3362.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116196 115..408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116196.3362.1 ID=prot_M-pyrifera_M_contig116196.3362.1|Name=mRNA_M-pyrifera_M_contig116196.3362.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp
MEKVAKLAAEKVAAGQHYEAQQLYKAQQRRMVGRKKYKEAIWLLVNGCTT
MLQHKQHSCAVELGELLVGALEAAAIPVDEGLGAPILARTLLNA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007317GET4
IPR011990TPR-like_helical_dom_sf