prot_M-pyrifera_M_contig11586.3291.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11586.3291.1
Unique Nameprot_M-pyrifera_M_contig11586.3291.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length41
Homology
BLAST of mRNA_M-pyrifera_M_contig11586.3291.1 vs. uniprot
Match: A0A6H5L2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J8_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.990e-17
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 0
Query:    1 NPECVDCGAPEPDWASISLGVVMCIECSGIHRAMGVHVSKV 41
            NPECVDCGA EPDW+SI+LGV+MCIECSGIHR+MGVHVSKV
Sbjct:  704 NPECVDCGAREPDWSSINLGVMMCIECSGIHRSMGVHVSKV 744          
BLAST of mRNA_M-pyrifera_M_contig11586.3291.1 vs. uniprot
Match: D7FVG0_ECTSI (Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG0_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 2.000e-17
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 0
Query:    1 NPECVDCGAPEPDWASISLGVVMCIECSGIHRAMGVHVSKV 41
            NPECVDCGA EPDW+SI+LGV+MCIECSGIHR+MGVHVSKV
Sbjct:  444 NPECVDCGAREPDWSSINLGVMMCIECSGIHRSMGVHVSKV 484          
BLAST of mRNA_M-pyrifera_M_contig11586.3291.1 vs. uniprot
Match: A0A835ZCL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL2_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 5.060e-17
Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    1 NPECVDCGAPEPDWASISLGVVMCIECSGIHRAMGVHVSKV 41
            NP+CVDCGA  PDWASISLGV+MCIECSGIHR+MGVH+SKV
Sbjct:  934 NPQCVDCGAATPDWASISLGVLMCIECSGIHRSMGVHISKV 974          
BLAST of mRNA_M-pyrifera_M_contig11586.3291.1 vs. uniprot
Match: A0A1E7FKS9_9STRA (Arf GTPase activating protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKS9_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 5.760e-17
Identity = 29/41 (70.73%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 NPECVDCGAPEPDWASISLGVVMCIECSGIHRAMGVHVSKV 41
            N  CVDCGAP PDW S++LG++MCI+CSG+HR++GVHVSKV
Sbjct:    4 NSTCVDCGAPNPDWVSLNLGILMCIDCSGVHRSLGVHVSKV 44          
BLAST of mRNA_M-pyrifera_M_contig11586.3291.1 vs. uniprot
Match: A0A067JFB9_JATCU (Uncharacterized protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JFB9_JATCU)

HSP 1 Score: 79.3 bits (194), Expect = 3.300e-16
Identity = 33/41 (80.49%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    1 NPECVDCGAPEPDWASISLGVVMCIECSGIHRAMGVHVSKV 41
            N +CVDCGAPEPDWAS++LGV+MCIECSG+HR +GVHVSKV
Sbjct:  505 NDKCVDCGAPEPDWASLNLGVLMCIECSGVHRNLGVHVSKV 545          
BLAST of mRNA_M-pyrifera_M_contig11586.3291.1 vs. uniprot
Match: A0A7S1D2Y4_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2Y4_CYCTE)

HSP 1 Score: 77.0 bits (188), Expect = 3.510e-16
Identity = 30/41 (73.17%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    1 NPECVDCGAPEPDWASISLGVVMCIECSGIHRAMGVHVSKV 41
            NP C DCGAP+PDWAS++LGV++CIECSG+HR++GVH+SKV
Sbjct:  121 NPYCADCGAPQPDWASLNLGVMVCIECSGVHRSLGVHLSKV 161          
BLAST of mRNA_M-pyrifera_M_contig11586.3291.1 vs. uniprot
Match: A0A7S1ZFW7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZFW7_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 8.400e-16
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 NPECVDCGAPEPDWASISLGVVMCIECSGIHRAMGVHVSKV 41
            NP C DCGAP PDWASI+LGV++CIECSG+HR++GVHVSKV
Sbjct:  707 NPICADCGAPSPDWASINLGVLLCIECSGVHRSLGVHVSKV 747          
BLAST of mRNA_M-pyrifera_M_contig11586.3291.1 vs. uniprot
Match: A0A6P5RFY6_PRUAV (ADP-ribosylation factor GTPase-activating protein AGD3-like n=1 Tax=Prunus avium TaxID=42229 RepID=A0A6P5RFY6_PRUAV)

HSP 1 Score: 75.9 bits (185), Expect = 1.220e-15
Identity = 30/41 (73.17%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 NPECVDCGAPEPDWASISLGVVMCIECSGIHRAMGVHVSKV 41
            N +C DCGAPEPDWAS++LGV++CIECSG+HR +GVH+SKV
Sbjct:  190 NDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKV 230          
BLAST of mRNA_M-pyrifera_M_contig11586.3291.1 vs. uniprot
Match: A0A444D6I4_ENSVE (Arf-GAP domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444D6I4_ENSVE)

HSP 1 Score: 72.0 bits (175), Expect = 1.320e-15
Identity = 27/41 (65.85%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 NPECVDCGAPEPDWASISLGVVMCIECSGIHRAMGVHVSKV 41
            N  C +CGAP+PDWAS++LG+++CIECSG+HR +GVH+SKV
Sbjct:   39 NDACAECGAPDPDWASLNLGILVCIECSGVHRNLGVHISKV 79          
BLAST of mRNA_M-pyrifera_M_contig11586.3291.1 vs. uniprot
Match: UPI001E695FC8 (ADP-ribosylation factor GTPase-activating protein AGD3-like n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E695FC8)

HSP 1 Score: 75.9 bits (185), Expect = 1.530e-15
Identity = 30/41 (73.17%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 NPECVDCGAPEPDWASISLGVVMCIECSGIHRAMGVHVSKV 41
            N +C DCGAPEPDWAS++LGV++CIECSG+HR +GVH+SKV
Sbjct:   96 NDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKV 136          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11586.3291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2J8_9PHAE1.990e-1787.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVG0_ECTSI2.000e-1787.80Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpu... [more]
A0A835ZCL2_9STRA5.060e-1785.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1E7FKS9_9STRA5.760e-1770.73Arf GTPase activating protein (Fragment) n=1 Tax=F... [more]
A0A067JFB9_JATCU3.300e-1680.49Uncharacterized protein n=2 Tax=Jatropha curcas Ta... [more]
A0A7S1D2Y4_CYCTE3.510e-1673.17Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S1ZFW7_9STRA8.400e-1678.05Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A6P5RFY6_PRUAV1.220e-1573.17ADP-ribosylation factor GTPase-activating protein ... [more]
A0A444D6I4_ENSVE1.320e-1565.85Arf-GAP domain-containing protein n=1 Tax=Ensete v... [more]
UPI001E695FC81.530e-1573.17ADP-ribosylation factor GTPase-activating protein ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 20..37
score: 54.41
coord: 1..20
score: 50.17
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 1..41
e-value: 2.3E-18
score: 66.4
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 1..41
score: 18.448
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 1..41
e-value: 2.0E-21
score: 78.3
NoneNo IPR availablePANTHERPTHR23180CENTAURIN/ARFcoord: 1..41
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11586contigM-pyrifera_M_contig11586:3529..3651 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11586.3291.1mRNA_M-pyrifera_M_contig11586.3291.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11586 3529..3651 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11586.3291.1 ID=prot_M-pyrifera_M_contig11586.3291.1|Name=mRNA_M-pyrifera_M_contig11586.3291.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=41bp
NPECVDCGAPEPDWASISLGVVMCIECSGIHRAMGVHVSKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO