prot_M-pyrifera_M_contig115294.3183.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115294.3183.1
Unique Nameprot_M-pyrifera_M_contig115294.3183.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length52
Homology
BLAST of mRNA_M-pyrifera_M_contig115294.3183.1 vs. uniprot
Match: UPI00166E414C (glycoside hydrolase family 32 protein n=1 Tax=Edaphobacter acidisoli TaxID=2040573 RepID=UPI00166E414C)

HSP 1 Score: 55.8 bits (133), Expect = 1.010e-7
Identity = 31/52 (59.62%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    2 ILDAGDYYAAKTSLF-GEERLLWGWVQEARAEAAYAAAGWAGAQALPRELGL 52
            ILD G YYA KT L     R+LWGW+QEAR    Y AAGWAG  +LPR L L
Sbjct:  293 ILDYGSYYAPKTQLDKAGNRILWGWIQEARPLEEYKAAGWAGMMSLPRVLSL 344          
BLAST of mRNA_M-pyrifera_M_contig115294.3183.1 vs. uniprot
Match: A0A2V7X744_9BACT (Beta-fructosidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7X744_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 6.640e-7
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    2 ILDAGDYYAAKTSLFGE-ERLLWGWVQEARAEAAYAAAGWAGAQALPRELGL 52
            ++D G YYAAKT L     R+LWGW+ EAR++A   AAGWAG  +LPR L L
Sbjct:  293 VVDWGSYYAAKTMLDRTANRILWGWLPEARSDADLIAAGWAGVMSLPRVLSL 344          
BLAST of mRNA_M-pyrifera_M_contig115294.3183.1 vs. uniprot
Match: A0A2V9IJ77_9BACT (Uncharacterized protein n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9IJ77_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 1.700e-6
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    2 ILDAGD-YYAAKTSLF-GEERLLWGWVQEARAEAAYAAAGWAGAQALPRELGL 52
            ++D  D YYAAK+ L  G  R+LWGW++EAR EAA   AGWAG  +LPR L L
Sbjct:  289 LVDGSDLYYAAKSFLGQGGRRILWGWLREARTEAAQRQAGWAGVMSLPRVLSL 341          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115294.3183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI00166E414C1.010e-759.62glycoside hydrolase family 32 protein n=1 Tax=Edap... [more]
A0A2V7X744_9BACT6.640e-755.77Beta-fructosidase n=1 Tax=Acidobacteria bacterium ... [more]
A0A2V9IJ77_9BACT1.700e-656.60Uncharacterized protein n=3 Tax=Acidobacteria bact... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023296Glycosyl hydrolase, five-bladed beta-propellor domain superfamilyGENE3D2.115.10.20coord: 3..52
e-value: 1.2E-10
score: 43.0
IPR023296Glycosyl hydrolase, five-bladed beta-propellor domain superfamilySUPERFAMILY75005Arabinanase/levansucrase/invertasecoord: 3..52
IPR013148Glycosyl hydrolase family 32, N-terminalPFAMPF00251Glyco_hydro_32Ncoord: 3..52
e-value: 2.6E-8
score: 33.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115294contigM-pyrifera_M_contig115294:110..265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115294.3183.1mRNA_M-pyrifera_M_contig115294.3183.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115294 110..265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115294.3183.1 ID=prot_M-pyrifera_M_contig115294.3183.1|Name=mRNA_M-pyrifera_M_contig115294.3183.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp
MILDAGDYYAAKTSLFGEERLLWGWVQEARAEAAYAAAGWAGAQALPREL
GL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023296Glyco_hydro_beta-prop_sf
IPR013148Glyco_hydro_32_N