prot_M-pyrifera_M_contig113718.2856.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113718.2856.1
Unique Nameprot_M-pyrifera_M_contig113718.2856.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length162
Homology
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BLAST of mRNA_M-pyrifera_M_contig113718.2856.1 vs. uniprot
Match: A0A5C5VSP5_9PLAN (Uncharacterized protein n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5VSP5_9PLAN)

HSP 1 Score: 55.1 bits (131), Expect = 8.860e-6
Identity = 45/165 (27.27%), Postives = 70/165 (42.42%), Query Frame = 0 
Query:    1 VSQRLSYDVQFGRLSEVRLKIPPFLYDQLTPDVMDASFTFLLDGEVPLTTDWTGPEVTVTLPNARLGKFDIVIDDYLPTPEQGSRPATLDVPIITSLDETFSSVRLIVPDQPTLSVTVDHDDWTRLSTVADGMQWIT---GQPVTDVTIALDRSLTKSPQRLKID 162
            V QR++ DVQ+G+L  V L +P  L D L P+        +  G   L    +   +T  LP A  G  +I +D   P        A +D+PI+   D  F     +V    ++ V  +   WT L T   G  W++      ++ V +   R L  S Q+  +D
Sbjct:  691 VHQRITLDVQYGKLDRVELLLPQELRD-LIPEFAIQESLEIRSGNEFLPVFLSTESLTALLPKATSGLIEIDVDYGFPV-TSADELAEMDLPILGLRDYPFDRAECLVTPFESIQVREEVAGWTALRTSPRGPLWVSPGIDGAISSVPLTFGRELADSTQQYIVD 853
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113718.2856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5C5VSP5_9PLAN8.860e-627.27Uncharacterized protein n=1 Tax=Thalassoglobus nep... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113718contigM-pyrifera_M_contig113718:4..489 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113718.2856.1mRNA_M-pyrifera_M_contig113718.2856.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113718 4..489 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113718.2856.1 ID=prot_M-pyrifera_M_contig113718.2856.1|Name=mRNA_M-pyrifera_M_contig113718.2856.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
VSQRLSYDVQFGRLSEVRLKIPPFLYDQLTPDVMDASFTFLLDGEVPLTT
DWTGPEVTVTLPNARLGKFDIVIDDYLPTPEQGSRPATLDVPIITSLDET
FSSVRLIVPDQPTLSVTVDHDDWTRLSTVADGMQWITGQPVTDVTIALDR
SLTKSPQRLKID
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