prot_M-pyrifera_M_contig112133.2552.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig112133.2552.1
Unique Name	prot_M-pyrifera_M_contig112133.2552.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	183

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig112133.2552.1 vs. uniprot
Match: A0A7V9A5W8_9BACT (Znf/thioredoxin_put domain-containing protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V9A5W8_9BACT)

HSP 1 Score: 334 bits (857), Expect = 1.350e-108
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0

Query:    1 PKKRSSSSGSFPVIPLVLGGVGVLVVVILVVTVISFASGGSDRPFQMNAAQQQFSKEDSYKQHFDVTEKQFDNMLQFLTAIEAIQSEEDLKQFDETVRGLTQEMESLTHGVRNIPPLPKDMQEKLKREVRQQLDSVEGRAKAAGQKLAKYTSNDRVAYAAQQYHQSHSYLGGALGAANTRSDT 183
            PKKRSSSSGSFPVIPLVLGGVGVLVVVILVVTVISFASGGSDRPFQMNAAQQQFSKEDSYKQHFDVTEKQFDNMLQFLTAIEAIQSEEDLKQFDETVRGLTQEMESLTHGVRNIPPLPKDMQEKLKREVRQQLDSVEGRAKAAGQKLAKYTSN RVAYAAQQYHQSHSYLGGALGAANTRSDT
Sbjct:   85 PKKRSSSSGSFPVIPLVLGGVGVLVVVILVVTVISFASGGSDRPFQMNAAQQQFSKEDSYKQHFDVTEKQFDNMLQFLTAIEAIQSEEDLKQFDETVRGLTQEMESLTHGVRNIPPLPKDMQEKLKREVRQQLDSVEGRAKAAGQKLAKYTSNARVAYAAQQYHQSHSYLGGALGAANTRSDT 267

[Close]

BLAST of mRNA_M-pyrifera_M_contig112133.2552.1 vs. uniprot
Match: UPI001CCCA045 (zinc-ribbon domain-containing protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCCA045)

HSP 1 Score: 123 bits (309), Expect = 2.060e-29
Identity = 72/160 (45.00%), Postives = 108/160 (67.50%), Query Frame = 0

Query:    1 PKKRSSSSGSFPVIPLVLGGVGVLVVVILVVTVISFAS------GGSDRPFQMNAAQQQFSKEDSYKQHFDVTEKQFDNMLQFLTAIEAIQSEEDLKQFDETVRGLTQEMESLTHGVRNIPPLPKDMQEKLKREVRQQLDSVEGRAKAAGQKLAKYTSND 154
            PKKR+ SSGSFP++P+VLGGVG+LVV ILV+TV+S AS      GGS   F  N+       E + +QH D+  KQ ++ ++F+ AIEAIQ + DL  F + + GLT+EMESL   V+ +P +P++  +++ +E +Q+L  +EGR +AAG+KL ++   D
Sbjct:   91 PKKRTKSSGSFPIVPVVLGGVGLLVVGILVITVVSLASNGLGDLGGSGGGFASNSVD-----ESAVQQHRDIAMKQHNSTIKFIEAIEAIQGDGDLPGFKQKIEGLTREMESLAESVKTVPAIPEERVQEINKENKQRLLKLEGRMRAAGEKLRQFNKPD 245

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig112133.2552.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig112133.2552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A7V9A5W8_9BACT	1.350e-108	99.45	Znf/thioredoxin_put domain-containing protein n=1 ...	[more]
UPI001CCCA045	2.060e-29	45.00	zinc-ribbon domain-containing protein n=1 Tax=Brem...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 119..146
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..37
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 38..183
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig112133	contig	M-pyrifera_M_contig112133:1..549 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig112133.2552.1	mRNA_M-pyrifera_M_contig112133.2552.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig112133 1..549 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig112133.2552.1 ID=prot_M-pyrifera_M_contig112133.2552.1|Name=mRNA_M-pyrifera_M_contig112133.2552.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp
PKKRSSSSGSFPVIPLVLGGVGVLVVVILVVTVISFASGGSDRPFQMNAA
QQQFSKEDSYKQHFDVTEKQFDNMLQFLTAIEAIQSEEDLKQFDETVRGL
TQEMESLTHGVRNIPPLPKDMQEKLKREVRQQLDSVEGRAKAAGQKLAKY
TSNDRVAYAAQQYHQSHSYLGGALGAANTRSDT