prot_M-pyrifera_M_contig112109.2545.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112109.2545.1
Unique Nameprot_M-pyrifera_M_contig112109.2545.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length172
Homology
BLAST of mRNA_M-pyrifera_M_contig112109.2545.1 vs. uniprot
Match: A0A3D4UG30_9BACT (Uncharacterized protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D4UG30_9BACT)

HSP 1 Score: 133 bits (334), Expect = 5.160e-33
Identity = 72/169 (42.60%), Postives = 102/169 (60.36%), Query Frame = 0
Query:    2 LGCGHQRVYECALSGGLMLCRRSWDEVYYQDWIQENGFICKGLPADVTILGWNQLGYSIENHPELQEMMAYRARVKRPPYGWNHEMFGHVVFAHLDHFTGFKHWDAPTPPEQLRSVEILGDPIELTFSTREDLEERILRAVRDRDWREEQSSGVRNRVRQQVTMKRFAQ 170
            +GCGHQR+ EC LSGGLML RRSWDE Y ++  +   F+      D  ++   +  +SI NH +L+ ++  RAR+ RP  GW+HE F   ++A +D  +  +      P    R +++L DP  LTFST+++LE  ILRAVRD  WR  +S G R RV   V+M RFA+
Sbjct:  461 MGCGHQRIGECVLSGGLMLARRSWDECYRENLFKMQAFLESEPEPDACLIHDRRPCFSIGNHQQLRTIIEERARIPRPIVGWDHEQFDDGIYAPIDAQSQPQFRTDTLPVLNQRPLQLLDDPDALTFSTQDELETGILRAVRDDAWRAARSVGTRTRVTDIVSMDRFAE 629          
BLAST of mRNA_M-pyrifera_M_contig112109.2545.1 vs. uniprot
Match: UPI001982EBBC (Uncharacterized protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI001982EBBC)

HSP 1 Score: 63.9 bits (154), Expect = 9.670e-9
Identity = 55/168 (32.74%), Postives = 77/168 (45.83%), Query Frame = 0
Query:    6 HQRVYECALSGGLMLCRRSWDEVYYQDWIQENGFICKGLPADVTILGWNQLGYSIENHPELQEMMAYRARVKRP----PYGWNHEMFGHVVFAHLDHFTGFKHWDAPTPPEQLRSVEILGDPIELTFSTREDLEERILRAVRDRDWREEQSSGVRNRVRQQVTMKRFA 169
            HQRV ECA+SGGL LCR +   ++     +  G + +    DV  +    LGYS+ + P     +    R+  P      GW   M+ H  +  +D+ TG    +A    + +   E+LGD    TFS    LE    RAV D  WRE  S  +  RVR  +T   FA
Sbjct:  635 HQRVMECAMSGGLPLCRLTRGLIHALTG-RFCGSLVRDASPDVCSMDREYLGYSVADSPTAMACLTQFQRLGVPLPCVQSGW---MYIHKKW--IDYHTGS---EAIRNSDMMGLEELLGDLSRFTFSDAASLEALASRAVEDPHWRETGSELIAGRVRAGLTHDMFA 793          
BLAST of mRNA_M-pyrifera_M_contig112109.2545.1 vs. uniprot
Match: A0A651F4P5_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A651F4P5_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 1.090e-5
Identity = 47/166 (28.31%), Postives = 69/166 (41.57%), Query Frame = 0
Query:    6 HQRVYECALSGGLMLCRRSWDEVYYQDWIQENGFICKGLPADVTILGWNQLGYSIENHPELQEMMAYRARVKRPPYGWNHEMFGHVVFAHLDHFTGFKHWDAPTPPEQLRSVEILGDPIELTFSTREDLEERILRAVRDRDWREEQSSGVRNRVRQQVTMKRFAQR 171
            HQRV ECALSGG   CR +  ++   D +          P + +     Q      NH  L  +MA R R+  P + W H +          +F            E+     +LGD  E+TF  R   E  I RA+ D  +R   +  +R R+ +++T   FA R
Sbjct:  638 HQRVIECALSGGFAACRITGSDISILDAVASARLA--NTPPEASYPPLRQEVAFTSNHAHLCMLMAQRQRLGLPVWQW-HCLMQEFRDPERPYFIS----------EEFSPAWLLGDLSEITFWDRPSFERLIDRAMTDDRFRASTTQSIRARIHERLTHDAFAGR 790          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112109.2545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A3D4UG30_9BACT5.160e-3342.60Uncharacterized protein n=2 Tax=Phycisphaerae TaxI... [more]
UPI001982EBBC9.670e-932.74Uncharacterized protein n=1 Tax=Pyrinomonadaceae b... [more]
A0A651F4P5_9BACT1.090e-528.31Uncharacterized protein n=1 Tax=Phycisphaeraceae b... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112109contigM-pyrifera_M_contig112109:1..570 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112109.2545.1mRNA_M-pyrifera_M_contig112109.2545.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112109 1..582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112109.2545.1 ID=prot_M-pyrifera_M_contig112109.2545.1|Name=mRNA_M-pyrifera_M_contig112109.2545.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp
MLGCGHQRVYECALSGGLMLCRRSWDEVYYQDWIQENGFICKGLPADVTI
LGWNQLGYSIENHPELQEMMAYRARVKRPPYGWNHEMFGHVVFAHLDHFT
GFKHWDAPTPPEQLRSVEILGDPIELTFSTREDLEERILRAVRDRDWREE
QSSGVRNRVRQQVTMKRFAQRL
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