prot_M-pyrifera_M_contig1117.2442.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1117.2442.1
Unique Nameprot_M-pyrifera_M_contig1117.2442.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length121
Homology
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BLAST of mRNA_M-pyrifera_M_contig1117.2442.1 vs. uniprot
Match: D7FM69_ECTSI (Ribosomal_S10 domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=D7FM69_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 1.820e-72
Identity = 113/119 (94.96%), Postives = 115/119 (96.64%), Query Frame = 0 
Query:    1 MSGYAKVKGHGQEEARVHRIRITLTSKNVKNLEKVCADLKKGAVDKELKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIADA 119
            MS Y K KG GQEEARVHRIRITLTSKNVKNLEKVCADLKKGAV+K+LKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIADA
Sbjct:    1 MSAYVKGKGLGQEEARVHRIRITLTSKNVKNLEKVCADLKKGAVEKKLKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIADA 119
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BLAST of mRNA_M-pyrifera_M_contig1117.2442.1 vs. uniprot
Match: A0A397FH44_9STRA (Ribosomal_S10 domain-containing protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A397FH44_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.940e-62
Identity = 98/114 (85.96%), Postives = 106/114 (92.98%), Query Frame = 0 
Query:    6 KVKGHGQEEARVHRIRITLTSKNVKNLEKVCADLKKGAVDKELKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIADA 119
            K  G   EE+R+HRIRITLTS+NVKNLEKVCADLKKGAVDK LKVSGPVRLPTK L++ TRKSPCGEGTNTWDRFEMRIHKRI+DLHSPSEIVK+ITSISIEPGVEVEVTIAD+
Sbjct:   26 KPTGFEGEESRIHRIRITLTSRNVKNLEKVCADLKKGAVDKNLKVSGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIADS 139
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BLAST of mRNA_M-pyrifera_M_contig1117.2442.1 vs. uniprot
Match: A0A835YYK1_9STRA (Ribosomal protein S10 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYK1_9STRA)

HSP 1 Score: 194 bits (492), Expect = 5.870e-62
Identity = 98/119 (82.35%), Postives = 107/119 (89.92%), Query Frame = 0 
Query:    1 MSGYAKVKGHGQEEARVHRIRITLTSKNVKNLEKVCADLKKGAVDKELKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIADA 119
            MS + K K    EE+RVHRIRITLTS+NVKNLEKVCADLK GAV  +LKVSGPVRLPT+KLKIVTRKSPCG GTNT+DRFEMRIHKRI+DLHSPSEIVK+ITSISIEPGVEVEVTI D+
Sbjct:    1 MSSFTKTKDIASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKDS 119
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BLAST of mRNA_M-pyrifera_M_contig1117.2442.1 vs. uniprot
Match: G4YYZ2_PHYSP (Ribosomal_S10 domain-containing protein n=7 Tax=Oomycota TaxID=4762 RepID=G4YYZ2_PHYSP)

HSP 1 Score: 190 bits (483), Expect = 1.380e-60
Identity = 96/119 (80.67%), Postives = 107/119 (89.92%), Query Frame = 0 
Query:    1 MSGYAKVKGHGQEEARVHRIRITLTSKNVKNLEKVCADLKKGAVDKELKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIADA 119
            MS   K K    EE R+HRIRITL+S+NVKNLEKVCADLK+GAVDK LKVSGPVRLPTK L++ TRKSPCGEGTNTWDRFEMRIHKRI+DLH+PS+IVK+ITSISIEPGVEVEVTIAD+
Sbjct:    1 MSLVNKPKTVEAEETRIHRIRITLSSRNVKNLEKVCADLKRGAVDKNLKVSGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHAPSDIVKQITSISIEPGVEVEVTIADS 119
[Close]
BLAST of mRNA_M-pyrifera_M_contig1117.2442.1 vs. uniprot
Match: H3GAS8_PHYRM (Ribosomal_S10 domain-containing protein n=9 Tax=Eukaryota TaxID=2759 RepID=H3GAS8_PHYRM)

HSP 1 Score: 190 bits (483), Expect = 1.380e-60
Identity = 96/119 (80.67%), Postives = 107/119 (89.92%), Query Frame = 0 
Query:    1 MSGYAKVKGHGQEEARVHRIRITLTSKNVKNLEKVCADLKKGAVDKELKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIADA 119
            MS   K K    EE R+HRIRITL+S+NVKNLEKVCADLK+GAVDK LKVSGPVRLPTK L++ TRKSPCGEGTNTWDRFEMRIHKRI+DLH+PS+IVK+ITSISIEPGVEVEVTIAD+
Sbjct:    1 MSLVNKQKTVEAEETRIHRIRITLSSRNVKNLEKVCADLKRGAVDKNLKVSGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHAPSDIVKQITSISIEPGVEVEVTIADS 119
[Close]
BLAST of mRNA_M-pyrifera_M_contig1117.2442.1 vs. uniprot
Match: A0A329RI77_9STRA (Ribosomal_S10 domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A329RI77_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.500e-60
Identity = 97/119 (81.51%), Postives = 107/119 (89.92%), Query Frame = 0 
Query:    1 MSGYAKVKGHGQEEARVHRIRITLTSKNVKNLEKVCADLKKGAVDKELKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIADA 119
            MS   K K    EE R+HRIRITLTS+NVKNLEKVCADLK+GAVDK LKVSGPVRLPTK L++ TRKSPCGEGTNTWDRFEMRIHKRI+DLH+PS+IVK+ITSISIEPGVEVEVTIAD+
Sbjct:   47 MSLVNKPKTVEAEETRIHRIRITLTSRNVKNLEKVCADLKRGAVDKNLKVSGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHAPSDIVKQITSISIEPGVEVEVTIADS 165
[Close]
BLAST of mRNA_M-pyrifera_M_contig1117.2442.1 vs. uniprot
Match: A0A421F2P5_9STRA (Ribosomal_S10 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F2P5_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.170e-59
Identity = 91/107 (85.05%), Postives = 103/107 (96.26%), Query Frame = 0 
Query:   13 EEARVHRIRITLTSKNVKNLEKVCADLKKGAVDKELKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIADA 119
            EE R+HRIRITL+S+NVKNLEKVCADLK+GAVDK LKV+GPVRLPTK L++ TRKSPCGEGTNTWDRFEMRIHKRI+DLH+PS+IVK+ITSISIEPGVEVEVTIAD+
Sbjct:   44 EETRIHRIRITLSSRNVKNLEKVCADLKRGAVDKNLKVAGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHAPSDIVKQITSISIEPGVEVEVTIADS 150
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BLAST of mRNA_M-pyrifera_M_contig1117.2442.1 vs. uniprot
Match: A0A6U5GMR1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5GMR1_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.520e-59
Identity = 95/120 (79.17%), Postives = 108/120 (90.00%), Query Frame = 0 
Query:    2 SGYAKVKGHG---QEEARVHRIRITLTSKNVKNLEKVCADLKKGAVDKELKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIAD 118
            SGY   K  G   + +A+VHRIRITLTS+NVKNLEKVCADLK+GA+DK+LKVSGPVRLPTKKL I TRK+P GEGTNTWDRFEMRIHKR++DLHSP+EIVK+ITSISIEPGVEVEVT+AD
Sbjct:    3 SGYPPKKELGGIVEADAKVHRIRITLTSRNVKNLEKVCADLKRGALDKKLKVSGPVRLPTKKLTITTRKAPSGEGTNTWDRFEMRIHKRLIDLHSPAEIVKQITSISIEPGVEVEVTVAD 122
[Close]
BLAST of mRNA_M-pyrifera_M_contig1117.2442.1 vs. uniprot
Match: A0A3B4WLA1_SERLL (40S ribosomal protein S20 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A3B4WLA1_SERLL)

HSP 1 Score: 183 bits (465), Expect = 8.420e-58
Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 0 
Query:   16 RVHRIRITLTSKNVKNLEKVCADLKKGAVDKELKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIAD 118
            +VHRIRITLTS+NVKNLEKVCADL KGA DK LKV GPVRLPTK L+I TRKSPCGEGTNTWDRFEMRIHKR++DLHSPSEIVK+ITSISIEPGVEVEVTIAD
Sbjct:   19 KVHRIRITLTSRNVKNLEKVCADLIKGAKDKRLKVKGPVRLPTKTLRITTRKSPCGEGTNTWDRFEMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIAD 121
[Close]
BLAST of mRNA_M-pyrifera_M_contig1117.2442.1 vs. uniprot
Match: F0YGJ7_AURAN (Ribosomal_S10 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGJ7_AURAN)

HSP 1 Score: 183 bits (464), Expect = 1.500e-57
Identity = 91/107 (85.05%), Postives = 101/107 (94.39%), Query Frame = 0 
Query:   13 EEARVHRIRITLTSKNVKNLEKVCADLKKGAVDKELKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIADA 119
            E+  VHRIRITLTS+NVKNLE VCA+LK+GA+DK+LKVSGPVRLPTKKL+I TRKSPCGEGTN+WDRFEMRIHKRI+DLHSPSEIVK+ITSI IE GVEVEVTIADA
Sbjct:   19 EQDTVHRIRITLTSRNVKNLETVCANLKRGALDKKLKVSGPVRLPTKKLRITTRKSPCGEGTNSWDRFEMRIHKRIIDLHSPSEIVKQITSIPIEAGVEVEVTIADA 125
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1117.2442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM69_ECTSI1.820e-7294.96Ribosomal_S10 domain-containing protein n=3 Tax=Eu... [more]
A0A397FH44_9STRA1.940e-6285.96Ribosomal_S10 domain-containing protein n=8 Tax=Sa... [more]
A0A835YYK1_9STRA5.870e-6282.35Ribosomal protein S10 domain-containing protein n=... [more]
G4YYZ2_PHYSP1.380e-6080.67Ribosomal_S10 domain-containing protein n=7 Tax=Oo... [more]
H3GAS8_PHYRM1.380e-6080.67Ribosomal_S10 domain-containing protein n=9 Tax=Eu... [more]
A0A329RI77_9STRA1.500e-6081.51Ribosomal_S10 domain-containing protein n=11 Tax=P... [more]
A0A421F2P5_9STRA2.170e-5985.05Ribosomal_S10 domain-containing protein n=3 Tax=Ph... [more]
A0A6U5GMR1_9STRA2.520e-5979.17Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A3B4WLA1_SERLL8.420e-5888.3540S ribosomal protein S20 n=3 Tax=Eukaryota TaxID=... [more]
F0YGJ7_AURAN1.500e-5785.05Ribosomal_S10 domain-containing protein n=1 Tax=Au... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001848Ribosomal protein S10PRINTSPR00971RIBOSOMALS10coord: 19..32
score: 40.93
coord: 54..69
score: 45.91
coord: 76..90
score: 52.18
IPR001848Ribosomal protein S10PANTHERPTHR1170030S RIBOSOMAL PROTEIN S10 FAMILY MEMBERcoord: 8..119
IPR001848Ribosomal protein S10HAMAPMF_00508Ribosomal_S10coord: 17..116
score: 18.538
IPR027486Ribosomal protein S10 domainSMARTSM01403Ribosomal_S10_2coord: 21..115
e-value: 8.8E-39
score: 144.8
IPR027486Ribosomal protein S10 domainPFAMPF00338Ribosomal_S10coord: 21..115
e-value: 3.2E-27
score: 94.6
IPR005729Ribosomal protein S10, eukaryotic/archaealTIGRFAMTIGR01046TIGR01046coord: 18..116
e-value: 1.2E-42
score: 142.3
IPR036838Ribosomal protein S10 domain superfamilyGENE3D3.30.70.600coord: 4..119
e-value: 5.2E-51
score: 173.7
IPR036838Ribosomal protein S10 domain superfamilySUPERFAMILY54999Ribosomal protein S10coord: 19..116
NoneNo IPR availablePANTHERPTHR11700:SF840S RIBOSOMAL PROTEIN S20coord: 8..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1117contigM-pyrifera_M_contig1117:278..1973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1117.2442.1mRNA_M-pyrifera_M_contig1117.2442.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1117 204..1973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1117.2442.1 ID=prot_M-pyrifera_M_contig1117.2442.1|Name=mRNA_M-pyrifera_M_contig1117.2442.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp
MSGYAKVKGHGQEEARVHRIRITLTSKNVKNLEKVCADLKKGAVDKELKV
SGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKE
ITSISIEPGVEVEVTIADAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001848Ribosomal_S10
IPR027486Ribosomal_S10_dom
IPR005729Ribosomal_S10_euk/arc
IPR036838Ribosomal_S10_dom_sf