prot_M-pyrifera_M_contig110769.2263.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110769.2263.1
Unique Nameprot_M-pyrifera_M_contig110769.2263.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length134
Homology
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BLAST of mRNA_M-pyrifera_M_contig110769.2263.1 vs. uniprot
Match: A0A8J4PRA7_9MYCE (Rho-GAP domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PRA7_9MYCE)

HSP 1 Score: 61.6 bits (148), Expect = 2.010e-8
Identity = 45/137 (32.85%), Postives = 70/137 (51.09%), Query Frame = 0 
Query:    1 QLCDYWDAYTDFFTKGFKWVNNMQPVIERYREHLNLEQEELDKRKKDENTSKSLFKVTGET--KVFGTDLEELCTREGLK-VPKFLKFTCSWIEKNASEMEGIFRISSFKDTMEDYKRMIDEGWRLDYSEVADPHVV 134
             L   ++ Y DF+ KG   +  ++  IE Y++ + LE            T+K   K+      K FG  LEE+  RE  K +P FL+    ++EK A   EG+FRIS+ K ++E  ++ I+ G  L+ + V D HVV
Sbjct:  179 SLLSAYEGYHDFYQKGTFQLTKIKSDIENYKKVI-LE------------TNKVAAKLRNYVPRKTFGIKLEEIFARESSKHLPLFLEEIFKYLEKEAPNTEGVFRISAGKSSIEALQQKIESGQPLELNNVLDTHVV 302
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BLAST of mRNA_M-pyrifera_M_contig110769.2263.1 vs. uniprot
Match: UPI000644AF59 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644AF59)

HSP 1 Score: 59.7 bits (143), Expect = 9.430e-8
Identity = 41/129 (31.78%), Postives = 66/129 (51.16%), Query Frame = 0 
Query:    7 DAYTDFFTKGFKWVNNMQPVIERYREHLNLEQEELDKRKKDENTSKSLFKVTGETKVFGTDLEELCTREGLK-VPKFLKFTCSWIEKNASEMEGIFRISSFKDTMEDYKRMIDEGWRLDYSEVADPHVV 134
            +AY DFF KG      ++  I+ YR+ +            + N  ++  +     K FG  LEE+  RE  + +P+FL      +EK+A  +EGIFRIS+ K ++E  ++ I+    LD   + DPH+V
Sbjct:  183 EAYHDFFQKGAFQFARIKADIDNYRKVI-----------METNKVQAKLRNYIPRKTFGIKLEEVFARESNRGMPQFLDEIFKHLEKSAPTLEGIFRISAGKSSIETLQQKIESSQPLDLHTLLDPHIV 300
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BLAST of mRNA_M-pyrifera_M_contig110769.2263.1 vs. uniprot
Match: L8GXS7_ACACA (RhoGAP domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GXS7_ACACA)

HSP 1 Score: 56.6 bits (135), Expect = 1.160e-6
Identity = 42/158 (26.58%), Postives = 71/158 (44.94%), Query Frame = 0 
Query:    1 QLCDYWDAYTDFFTKGFKWVNNMQPVIERYREHLNLEQEELDKRKKDENTS-------------------KSLFKVTGETKVFGTDLEELCTREGL---KVPKFLKFTCSWIEKNASEMEGIFRISSFKDTMEDYKRMI--DEGWRLDYSEVADPHVV 134
             LCDY DAY  FF +G + ++ +QP IERYRE+         +R+KDE+                     +  +   G T +FG  L  L  +EG+   +VP        +I ++  +  G+FR+++ ++      ++I    G  ++     DPH V
Sbjct:  287 HLCDYLDAYGQFFAQGQQMLSRLQPSIERYREYT--------QRQKDEDRQHXXXXXXXXXXXREALVLEQKKYAEEGNTSLFGAPLHVLYEKEGISPPQVPSLYHVLIKYIREHGLKEVGLFRMAAAQNATAHIMKLILTASGRPIELEGELDPHAV 436
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110769.2263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A8J4PRA7_9MYCE2.010e-832.85Rho-GAP domain-containing protein n=1 Tax=Polyspho... [more]
UPI000644AF599.430e-831.78hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
L8GXS7_ACACA1.160e-626.58RhoGAP domain containing protein n=1 Tax=Acanthamo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 27..47
NoneNo IPR availablePANTHERPTHR23176:SF99RHO GTPASE-ACTIVATING PROTEIN GACPcoord: 1..134
NoneNo IPR availablePANTHERPTHR23176RHO/RAC/CDC GTPASE-ACTIVATING PROTEINcoord: 1..134
IPR008936Rho GTPase activation proteinGENE3D1.10.555.10coord: 12..134
e-value: 3.0E-16
score: 61.2
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 60..134
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 66..134
score: 11.014

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110769contigM-pyrifera_M_contig110769:7..573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110769.2263.1mRNA_M-pyrifera_M_contig110769.2263.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110769 7..573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110769.2263.1 ID=prot_M-pyrifera_M_contig110769.2263.1|Name=mRNA_M-pyrifera_M_contig110769.2263.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp
QLCDYWDAYTDFFTKGFKWVNNMQPVIERYREHLNLEQEELDKRKKDENT
SKSLFKVTGETKVFGTDLEELCTREGLKVPKFLKFTCSWIEKNASEMEGI
FRISSFKDTMEDYKRMIDEGWRLDYSEVADPHVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008936Rho_GTPase_activation_prot
IPR000198RhoGAP_dom