prot_M-pyrifera_M_contig110641.2235.1 (polypeptide) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110641.2235.1 vs. uniprot
Match: F2UA69_SALR5 (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UA69_SALR5) HSP 1 Score: 67.4 bits (163), Expect = 2.320e-13 Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 0
Query: 2 FRTLTGKTIVVELKNDLRIKGTLHSVDQFLNFKLDDATCENVD 44
F+TL GKT+VVELKNDL I+GTL SVDQFLN KLDD T NVD
Sbjct: 24 FKTLVGKTVVVELKNDLSIQGTLTSVDQFLNIKLDDITVGNVD 66
BLAST of mRNA_M-pyrifera_M_contig110641.2235.1 vs. uniprot
Match: A0A1M8A4H9_MALS4 (U6 snRNA-associated Sm-like protein LSm2 n=6 Tax=Malassezia TaxID=55193 RepID=A0A1M8A4H9_MALS4) HSP 1 Score: 62.4 bits (150), Expect = 1.470e-11 Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 0
Query: 2 FRTLTGKTIVVELKNDLRIKGTLHSVDQFLNFKLDD 37
F+TLTG+T+ VELKNDL I+GTL SVDQFLNFKLDD
Sbjct: 7 FKTLTGQTVTVELKNDLAIQGTLKSVDQFLNFKLDD 42
BLAST of mRNA_M-pyrifera_M_contig110641.2235.1 vs. uniprot
Match: A0A0G4IYK4_PLABS (Sm domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYK4_PLABS) HSP 1 Score: 62.4 bits (150), Expect = 3.450e-11 Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 0
Query: 2 FRTLTGKTIVVELKNDLRIKGTLHSVDQFLNFKLDDA 38
F+TLTGK +V+ELKNDLR+KG LHSVDQ+LN KLD+
Sbjct: 45 FKTLTGKGVVIELKNDLRLKGVLHSVDQYLNIKLDEV 81
BLAST of mRNA_M-pyrifera_M_contig110641.2235.1 vs. uniprot
Match: A0A0L0EYE4_9EUKA (Sm domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0EYE4_9EUKA) HSP 1 Score: 60.1 bits (144), Expect = 5.380e-11 Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query: 2 FRTLTGKTIVVELKNDLRIKGTLHSVDQFLNFKLDDATCENVD 44
F+TL +VVELKN+L+I+G LHSVDQFLN KL D T ENV+
Sbjct: 6 FKTLVDSDVVVELKNELKIQGKLHSVDQFLNIKLKDITVENVE 48
BLAST of mRNA_M-pyrifera_M_contig110641.2235.1 vs. uniprot
Match: A0A132AEP3_SARSC (U6 snRNA-associated Sm-like protein LSm2 n=4 Tax=Psoroptidia TaxID=223472 RepID=A0A132AEP3_SARSC) HSP 1 Score: 60.8 bits (146), Expect = 5.550e-11 Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0
Query: 2 FRTLTGKTIVVELKNDLRIKGTLHSVDQFLNFKLDDAT 39
F+TL GK I+VELKNDL I GTLH+VDQ+LNFKL D T
Sbjct: 7 FKTLVGKDIIVELKNDLAIAGTLHAVDQYLNFKLTDIT 44
BLAST of mRNA_M-pyrifera_M_contig110641.2235.1 vs. uniprot
Match: B8N5Y8_ASPFN (U6 snRNA-associated Sm-like protein LSm2 n=47 Tax=Eurotiales TaxID=5042 RepID=B8N5Y8_ASPFN) HSP 1 Score: 60.5 bits (145), Expect = 8.870e-11 Identity = 26/43 (60.47%), Postives = 36/43 (83.72%), Query Frame = 0
Query: 2 FRTLTGKTIVVELKNDLRIKGTLHSVDQFLNFKLDDATCENVD 44
F+TLT +T+++ELKND+RI+GTL SVDQ+LN KLDD ++D
Sbjct: 7 FKTLTNQTVIIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLD 49
BLAST of mRNA_M-pyrifera_M_contig110641.2235.1 vs. uniprot
Match: A0A1D8PSP7_CANAL (U6 snRNA-associated Sm-like protein LSm2 n=5 Tax=Candida TaxID=1535326 RepID=A0A1D8PSP7_CANAL) HSP 1 Score: 59.7 bits (143), Expect = 1.700e-10 Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0
Query: 2 FRTLTGKTIVVELKNDLRIKGTLHSVDQFLNFKLDDATCEN 42
F+TL + + VELKND+ IKGTL SVDQFLN KLD+ TC N
Sbjct: 7 FKTLVDQEVTVELKNDIEIKGTLKSVDQFLNLKLDNITCTN 47
BLAST of mRNA_M-pyrifera_M_contig110641.2235.1 vs. uniprot
Match: C5M2V1_CANTT (U6 snRNA-associated Sm-like protein LSm2 n=5 Tax=Candida TaxID=1535326 RepID=C5M2V1_CANTT) HSP 1 Score: 59.7 bits (143), Expect = 1.700e-10 Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0
Query: 2 FRTLTGKTIVVELKNDLRIKGTLHSVDQFLNFKLDDATCEN 42
F+TL + + VELKND+ IKGTL SVDQFLN KLD+ TC N
Sbjct: 7 FKTLVDQEVTVELKNDMEIKGTLKSVDQFLNLKLDNITCTN 47
BLAST of mRNA_M-pyrifera_M_contig110641.2235.1 vs. uniprot
Match: A0A0M0JF59_9EUKA (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JF59_9EUKA) HSP 1 Score: 59.7 bits (143), Expect = 1.870e-10 Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0
Query: 2 FRTLTGKTIVVELKNDLRIKGTLHSVDQFLNFKLDDATCENV 43
F+TL GK IVVELKNDL I+GTLHSVDQ+LN KL + + E+V
Sbjct: 7 FKTLVGKEIVVELKNDLSIRGTLHSVDQYLNVKLLNISVEDV 48
BLAST of mRNA_M-pyrifera_M_contig110641.2235.1 vs. uniprot
Match: A0A2H2IRM7_CAEJA (Sm domain-containing protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2IRM7_CAEJA) HSP 1 Score: 59.3 bits (142), Expect = 1.900e-10 Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0
Query: 2 FRTLTGKTIVVELKNDLRIKGTLHSVDQFLNFKLDDATCENVD 44
F++L GK +VVELKNDL I GTLHSVDQ+LN KL D T + D
Sbjct: 7 FKSLVGKDVVVELKNDLSICGTLHSVDQYLNMKLTDITVSDTD 49 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110641.2235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_M-pyrifera_M_contig110641.2235.1 ID=prot_M-pyrifera_M_contig110641.2235.1|Name=mRNA_M-pyrifera_M_contig110641.2235.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=44bpback to top |