prot_M-pyrifera_M_contig10649.1400.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10649.1400.1
Unique Nameprot_M-pyrifera_M_contig10649.1400.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length78
Homology
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BLAST of mRNA_M-pyrifera_M_contig10649.1400.1 vs. uniprot
Match: D8LD44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD44_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 2.400e-23
Identity = 54/80 (67.50%), Postives = 59/80 (73.75%), Query Frame = 0 
Query:    1 MYDQMRSGAGVTLVLEAGYASEPG--GDIIVCKA-KYSGEIVGVALDPLPSGPFFRDVGTAGFAKDSSSAATLMDKAKYT 77
            MY Q+RSGAG  LVLEAGY S  G  G+I VCK  KY+GE VGVALDPLP GPFF+ V   GF  D SSAATLMDK K+T
Sbjct:  240 MYSQLRSGAGKKLVLEAGYGSVEGDDGEITVCKGIKYNGERVGVALDPLPDGPFFKGVAKGGFGADKSSAATLMDKKKHT 319
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BLAST of mRNA_M-pyrifera_M_contig10649.1400.1 vs. uniprot
Match: A0A6H5JWG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG2_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 4.060e-23
Identity = 53/80 (66.25%), Postives = 58/80 (72.50%), Query Frame = 0 
Query:    1 MYDQMRSGAGVTLVLEAGYASEPG--GDIIVCKA-KYSGEIVGVALDPLPSGPFFRDVGTAGFAKDSSSAATLMDKAKYT 77
            MY Q+RSGAG  LVLEAGY    G  G+I VCK  KY+GE VGVALDPLP GPFF+ V   GF  D SSAATLMDK K+T
Sbjct:  155 MYSQLRSGAGKMLVLEAGYGPVEGDDGEITVCKGIKYNGERVGVALDPLPDGPFFKGVAKGGFGADRSSAATLMDKKKHT 234
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10649.1400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD44_ECTSI2.400e-2367.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWG2_9PHAE4.060e-2366.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..77
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10649contigM-pyrifera_M_contig10649:1798..5277 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10649.1400.1mRNA_M-pyrifera_M_contig10649.1400.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10649 1723..6621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10649.1400.1 ID=prot_M-pyrifera_M_contig10649.1400.1|Name=mRNA_M-pyrifera_M_contig10649.1400.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp
MYDQMRSGAGVTLVLEAGYASEPGGDIIVCKAKYSGEIVGVALDPLPSGP
FFRDVGTAGFAKDSSSAATLMDKAKYT*
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