prot_M-pyrifera_M_contig106345.1371.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig106345.1371.1
Unique Nameprot_M-pyrifera_M_contig106345.1371.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length137
Homology
BLAST of mRNA_M-pyrifera_M_contig106345.1371.1 vs. uniprot
Match: K3W8M9_GLOUD (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8M9_GLOUD)

HSP 1 Score: 82.4 bits (202), Expect = 3.300e-16
Identity = 43/80 (53.75%), Postives = 58/80 (72.50%), Query Frame = 0
Query:   51 SMRRLYAMLAAVSDHVARVTEGKAPPDPVVGRAIANAVAAVPIIRPEDFGRVFTDALQDLLAVGYLSTLTEAQLALAERM 130
            SM RLYA L   S +V+ V EGK   D  VGR IA+A+A++P IRP+ F ++F+  LQDLL V YLS LT+AQL++AE++
Sbjct:  205 SMERLYACLENASSYVSDVVEGKIVSDAKVGREIADALASIPAIRPDQFDQIFSSGLQDLLMVSYLSGLTQAQLSMAEKL 284          
BLAST of mRNA_M-pyrifera_M_contig106345.1371.1 vs. uniprot
Match: A0A024TRI9_9STRA (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TRI9_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.710e-15
Identity = 51/130 (39.23%), Postives = 79/130 (60.77%), Query Frame = 0
Query:    2 QEVRVLLAAEPAERTALDAMVRGERVEGSAKTAIGTASRLSPARSHLLRSMRRLYAMLAAVSDHVARVTEGKAPP-DPVVGRAIANAVAAVPIIRPEDFGRVFTDALQDLLAVGYLSTLTEAQLALAERM 130
            ++V+V+     AE  ALDAMV+    E ++         L      L  ++ RL+A+L   +D+V +V  GK P  +P +GR +A AVA++P IR + F ++F   LQDLL V YLS+LT+AQL++AE++
Sbjct:  163 KQVKVVTKTYEAEAIALDAMVKASTAETTS---------LPTDLEALEHAIARLHALLGQSADYVEKVIAGKEPTANPKIGRELAEAVASIPAIRSDVFDQIFNSGLQDLLMVSYLSSLTQAQLSIAEKL 283          
BLAST of mRNA_M-pyrifera_M_contig106345.1371.1 vs. uniprot
Match: A0A485LR58_9STRA (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LR58_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 4.700e-15
Identity = 52/129 (40.31%), Postives = 81/129 (62.79%), Query Frame = 0
Query:    2 QEVRVLLAAEPAERTALDAMVRGERVEGSAKTAIGTASRLSPARSHLLRSMRRLYAMLAAVSDHVARVTEGKAPPDPVVGRAIANAVAAVPIIRPEDFGRVFTDALQDLLAVGYLSTLTEAQLALAERM 130
            ++V+V      AE  ALD M +   ++ SA TA  ++S L    + L  ++ RL+ +LA  +D V  V  GK   +P +GR +A AVA++P IR + F ++F + LQDLL V YLS+LT+AQL++AE++
Sbjct:  161 KQVKVQTKTYEAESIALDVMAK---LDASA-TADASSSSLPTDLAALEHAIARLHDVLARSADFVGDVVAGKQTSNPKIGRELAEAVASIPAIRSDVFDQIFNNGLQDLLMVSYLSSLTQAQLSIAEKL 285          
BLAST of mRNA_M-pyrifera_M_contig106345.1371.1 vs. uniprot
Match: W4FPJ1_9STRA (Eukaryotic translation initiation factor 3 subunit F n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPJ1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.250e-14
Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 0
Query:    2 QEVRVLLAAEPAERTALDAMVRGERVEGSAKTAIGTASRLSPARSHLLRSMRRLYAMLAAVSDHVARVTEGKAPPDPVVGRAIANAVAAVPIIRPEDFGRVFTDALQDLLAVGYLSTLTEAQLALAERMAKA 133
            ++V+V      AE  AL+ M         AK +    S L      L  S+ RL+A+L   +D V  V  G +  +P +GR +A AVA++P IR + F ++F + LQDLL V YLS+LT+AQL++AE++  A
Sbjct:  162 KQVKVQTKTYEAESIALNVM---------AKASTAALSSLPTELEALEHSIARLHALLGQSADFVGNVVSGASVGNPKIGRELAEAVASIPAIRTDVFDQIFNNGLQDLLMVSYLSSLTQAQLSIAEKLVNA 284          
BLAST of mRNA_M-pyrifera_M_contig106345.1371.1 vs. uniprot
Match: A0A0P1AFY5_PLAHL (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFY5_PLAHL)

HSP 1 Score: 76.3 bits (186), Expect = 5.920e-14
Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 0
Query:   51 SMRRLYAMLAAVSDHVARVTEGKAPPDPVVGRAIANAVAAVPIIRPEDFGRVFTDALQDLLAVGYLSTLTEAQLALAERM 130
            +M +LY  +   S  VA V  GK P D  +GR I++A+AA+P++R E F ++F   LQDLL V YLS LT+AQL++AE++
Sbjct:  197 TMEKLYTCIDGASSFVADVVAGKQPADAKIGREISDALAAIPMLREEQFDQIFNTGLQDLLMVSYLSGLTQAQLSMAEKL 276          
BLAST of mRNA_M-pyrifera_M_contig106345.1371.1 vs. uniprot
Match: A0A6G0W460_9STRA (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W460_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.140e-13
Identity = 48/129 (37.21%), Postives = 76/129 (58.91%), Query Frame = 0
Query:    2 QEVRVLLAAEPAERTALDAMVRGERVEGSAKTAIGTASRLSPARSHLLRSMRRLYAMLAAVSDHVARVTEGKAPPDPVVGRAIANAVAAVPIIRPEDFGRVFTDALQDLLAVGYLSTLTEAQLALAERM 130
            ++++V      AE  ALD M + E            A  L      L R++ RL+ +L+  +D+V  V  GK P +P + R +A+AVA++P IR + F ++F + LQDLL V YLS+LT+AQL++AE++
Sbjct:  159 KQIKVQTKTYEAESIALDVMSKSE-----------AAPSLPSDLEALERAITRLHTILSQSADYVGDVIAGKIPANPKICRDLADAVASIPPIRSDVFDQIFNNGLQDLLMVSYLSSLTQAQLSIAEKL 276          
BLAST of mRNA_M-pyrifera_M_contig106345.1371.1 vs. uniprot
Match: A0A812X8J9_SYMMI (TIF3F1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X8J9_SYMMI)

HSP 1 Score: 75.1 bits (183), Expect = 1.790e-13
Identity = 47/133 (35.34%), Postives = 76/133 (57.14%), Query Frame = 0
Query:    2 QEVRVLLAAEPAERTALDAMVRGERVEGSAKTAIGTASRLSPARSHLLRSMRRLYAMLAAVSDHVARVTEGKAPPDPVVGRAIANAVAAVPIIRPEDFGRVFTDALQDLLAVGYLSTLTEAQLALAERMAKAL 134
            QEV V L   PAE T L+ M+ G+  + S  ++    S +    + L  S+RRL  ++  +S +V  V  G   PD  +G  IA+ ++++ ++ P+DF R      QD+L V YLS LT+AQLA+AE++ + +
Sbjct:  159 QEVHVELCLSPAETTCLNHMISGQE-QDSTFSSPEMLSSIPSVPADLTSSLRRLVGLVDKISAYVDEVAAGTREPDAQIGIMIADVLSSLQVVGPDDFQRYMDAKTQDMLMVSYLSNLTKAQLAVAEKLIQVI 290          
BLAST of mRNA_M-pyrifera_M_contig106345.1371.1 vs. uniprot
Match: A0A8B7ZGJ1_ACAPL (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Valvatida TaxID=41166 RepID=A0A8B7ZGJ1_ACAPL)

HSP 1 Score: 74.7 bits (182), Expect = 2.210e-13
Identity = 48/127 (37.80%), Postives = 73/127 (57.48%), Query Frame = 0
Query:    4 VRVLLAAEPAERTALDAMVRGERVEGSAKTAIGTASRLSPARSHLLRSMRRLYAMLAAVSDHVARVTEGKAPPDPVVGRAIANAVAAVPIIRPEDFGRVFTDALQDLLAVGYLSTLTEAQLALAERM 130
            +++ L     ER  LDA++RG+    S +  + + + L     H+ +S  +L  M+A V D+V  V  GK P D  VGR + + VA VP + PE+F R+ T  ++DLL V YLS L E QL+L E++
Sbjct:  152 IKMALVCHEPERVGLDALIRGQ---ASGRRTMESVNDLQ----HVSKSSVKLQEMIAIVLDYVDDVLNGKIPADNQVGRFLMDLVANVPKLDPEEFERIITSNMKDLLMVVYLSNLVETQLSLNEKL 271          
BLAST of mRNA_M-pyrifera_M_contig106345.1371.1 vs. uniprot
Match: A0A662XXQ2_9STRA (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXQ2_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 4.540e-13
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 0
Query:   51 SMRRLYAMLAAVSDHVARVTEGKAPPDPVVGRAIANAVAAVPIIRPEDFGRVFTDALQDLLAVGYLSTLTEAQLALAERM 130
            ++ RLYA +   S  V  V  G  P D  +GR IA+A+AA+P++R E F ++F   LQDLL V YLS LT+AQL++AE++
Sbjct:  203 TIERLYACIDRASGFVGEVVAGSQPADAKLGREIADALAAIPMLRQEQFDQLFNSGLQDLLMVSYLSGLTQAQLSMAEKL 282          
BLAST of mRNA_M-pyrifera_M_contig106345.1371.1 vs. uniprot
Match: A0A3M6VE70_9STRA (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VE70_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.550e-11
Identity = 36/80 (45.00%), Postives = 54/80 (67.50%), Query Frame = 0
Query:   51 SMRRLYAMLAAVSDHVARVTEGKAPPDPVVGRAIANAVAAVPIIRPEDFGRVFTDALQDLLAVGYLSTLTEAQLALAERM 130
            +M++LY  +   S  V  V  GK   D  +GR IA+A+AA+P++R + F ++F   LQDLL V YLS LT+AQL++AE++
Sbjct:  197 TMQQLYKCIDGASTFVGDVVSGKQMGDAKLGREIADALAAIPVLREDQFDQLFNTGLQDLLMVSYLSGLTQAQLSMAEKL 276          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106345.1371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K3W8M9_GLOUD3.300e-1653.75Eukaryotic translation initiation factor 3 subunit... [more]
A0A024TRI9_9STRA1.710e-1539.23Eukaryotic translation initiation factor 3 subunit... [more]
A0A485LR58_9STRA4.700e-1540.31Eukaryotic translation initiation factor 3 subunit... [more]
W4FPJ1_9STRA3.250e-1437.88Eukaryotic translation initiation factor 3 subunit... [more]
A0A0P1AFY5_PLAHL5.920e-1447.50Eukaryotic translation initiation factor 3 subunit... [more]
A0A6G0W460_9STRA1.140e-1337.21Eukaryotic translation initiation factor 3 subunit... [more]
A0A812X8J9_SYMMI1.790e-1335.34TIF3F1 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A8B7ZGJ1_ACAPL2.210e-1337.80Eukaryotic translation initiation factor 3 subunit... [more]
A0A662XXQ2_9STRA4.540e-1347.50Eukaryotic translation initiation factor 3 subunit... [more]
A0A3M6VE70_9STRA1.550e-1145.00Eukaryotic translation initiation factor 3 subunit... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024969Rpn11/EIF3F, C-terminalPFAMPF13012MitMem_regcoord: 13..130
e-value: 5.2E-15
score: 55.8
NoneNo IPR availablePANTHERPTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDcoord: 3..132
IPR027531Eukaryotic translation initiation factor 3 subunit FPANTHERPTHR10540:SF6EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Fcoord: 3..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106345contigM-pyrifera_M_contig106345:206..616 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106345.1371.1mRNA_M-pyrifera_M_contig106345.1371.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig106345 206..622 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig106345.1371.1 ID=prot_M-pyrifera_M_contig106345.1371.1|Name=mRNA_M-pyrifera_M_contig106345.1371.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
MQEVRVLLAAEPAERTALDAMVRGERVEGSAKTAIGTASRLSPARSHLLR
SMRRLYAMLAAVSDHVARVTEGKAPPDPVVGRAIANAVAAVPIIRPEDFG
RVFTDALQDLLAVGYLSTLTEAQLALAERMAKALPF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024969Rpn11/EIF3F_C
IPR027531eIF3f