prot_M-pyrifera_M_contig106312.1366.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig106312.1366.1
Unique Nameprot_M-pyrifera_M_contig106312.1366.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length100
Homology
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BLAST of mRNA_M-pyrifera_M_contig106312.1366.1 vs. uniprot
Match: A0A2E7KLC3_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KLC3_9PLAN)

HSP 1 Score: 195 bits (496), Expect = 5.140e-62
Identity = 97/100 (97.00%), Postives = 100/100 (100.00%), Query Frame = 0 
Query:    1 MEIMLTMLLGVATAAGPSVINADFEQKDVRTGLPTGWSYTSLPGRQHLVNYQTTQVTAAQKQGSALSITVASDHPEQIVAYNIHQDLQGLTPGKAYRISA 100
            MEIMLTMLLGVATAAGP+VINADFEQKDVRTGLPTGWSYTSLPGRQHLVNYQTTQVTAA+KQGSALSITVASDHPEQIVAYNIHQDLQGLTPGKAYR+SA
Sbjct:    1 MEIMLTMLLGVATAAGPTVINADFEQKDVRTGLPTGWSYTSLPGRQHLVNYQTTQVTAAKKQGSALSITVASDHPEQIVAYNIHQDLQGLTPGKAYRVSA 100
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BLAST of mRNA_M-pyrifera_M_contig106312.1366.1 vs. uniprot
Match: A0A518AEU3_9PLAN (Uncharacterized protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AEU3_9PLAN)

HSP 1 Score: 161 bits (407), Expect = 1.760e-48
Identity = 79/100 (79.00%), Postives = 87/100 (87.00%), Query Frame = 0 
Query:    1 MEIMLTMLLGVATAAGPSVINADFEQKDVRTGLPTGWSYTSLPGRQHLVNYQTTQVTAAQKQGSALSITVASDHPEQIVAYNIHQDLQGLTPGKAYRISA 100
            MEIMLTMLL  ATA  P+V+NADFEQKD RTGLPTGW++TSLP RQHLVNY+TTQV A Q Q  ALSITVASDHPE  VAYNIHQDL+GLTPGK+YR+SA
Sbjct:    1 MEIMLTMLLSFATAVSPTVVNADFEQKDARTGLPTGWAFTSLPDRQHLVNYRTTQVAAEQGQTRALSITVASDHPEHKVAYNIHQDLKGLTPGKSYRVSA 100
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BLAST of mRNA_M-pyrifera_M_contig106312.1366.1 vs. uniprot
Match: A0A517V607_9PLAN (Uncharacterized protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V607_9PLAN)

HSP 1 Score: 103 bits (257), Expect = 8.800e-26
Identity = 52/101 (51.49%), Postives = 71/101 (70.30%), Query Frame = 0 
Query:    1 MEIMLTMLLGVATAAGPSVINADFEQKDVRTGLPTGWSYTSLPGRQHLVNYQTTQVTAAQKQGS-ALSITVASDHPEQIVAYNIHQDLQGLTPGKAYRISA 100
            M I+L+++L  AT+  P V+NADFE  D R+  P+GW +TSLPG+  LV+YQ+  +   +  GS  L+I +A+DHP+Q VAYN HQDLQG   GK YR+SA
Sbjct:    1 MLILLSLVLCAATSQAPQVVNADFETVDARSATPSGWLFTSLPGQSQLVSYQS--LLEPEANGSRVLAIRIAADHPQQQVAYNAHQDLQGFEAGKTYRVSA 99
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BLAST of mRNA_M-pyrifera_M_contig106312.1366.1 vs. uniprot
Match: A0A517X429_9PLAN (Uncharacterized protein n=1 Tax=Gimesia maris TaxID=122 RepID=A0A517X429_9PLAN)

HSP 1 Score: 94.7 bits (234), Expect = 2.540e-22
Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 0 
Query:    1 MEIMLTMLLGVATAAGPSVINADFEQKDVRTGLPTGWSYTSLPGRQHLVNYQTTQVTAAQKQGS-ALSITVASDHPEQIVAYNIHQDLQGLTPGKAYRISA 100
            M ++L + L  A +  P ++NADFE  + R+  P+GW +TSLPG+  LV+YQ+  +   +  GS  L+I VA+DHP+Q VAYN HQDLQG   GK YR++A
Sbjct:    1 MVLLLALSLCAAASKTPQIVNADFETVNPRSATPSGWLFTSLPGQSQLVSYQS--LLEPEVNGSRVLAIKVATDHPQQRVAYNAHQDLQGFQAGKTYRVTA 99
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106312.1366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2E7KLC3_9PLAN5.140e-6297.00Uncharacterized protein n=6 Tax=Gimesia TaxID=1649... [more]
A0A518AEU3_9PLAN1.760e-4879.00Uncharacterized protein n=3 Tax=Gimesia panareensi... [more]
A0A517V607_9PLAN8.800e-2651.49Uncharacterized protein n=1 Tax=Gimesia algae TaxI... [more]
A0A517X429_9PLAN2.540e-2247.52Uncharacterized protein n=1 Tax=Gimesia maris TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 18..100
e-value: 3.5E-5
score: 26.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..100
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.572

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106312contigM-pyrifera_M_contig106312:1..300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106312.1366.1mRNA_M-pyrifera_M_contig106312.1366.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig106312 1..300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig106312.1366.1 ID=prot_M-pyrifera_M_contig106312.1366.1|Name=mRNA_M-pyrifera_M_contig106312.1366.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=100bp
MEIMLTMLLGVATAAGPSVINADFEQKDVRTGLPTGWSYTSLPGRQHLVN
YQTTQVTAAQKQGSALSITVASDHPEQIVAYNIHQDLQGLTPGKAYRISA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf