prot_M-pyrifera_M_contig105107.1099.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig105107.1099.1
Unique Nameprot_M-pyrifera_M_contig105107.1099.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length209
Homology
BLAST of mRNA_M-pyrifera_M_contig105107.1099.1 vs. uniprot
Match: A0A7X5WTK5_9ACTN (RNB domain-containing ribonuclease n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WTK5_9ACTN)

HSP 1 Score: 289 bits (740), Expect = 3.690e-97
Identity = 140/177 (79.10%), Postives = 155/177 (87.57%), Query Frame = 0
Query:   32 IDWPDSVGYAERVRSLRPDTPSRAALLSQAARGLRGAGYVAFTGHDIPSDPLHSAIASTYAHVTAPIRRLCDRFANEIVVAHCADRTPPSWAVEALEELPSLMGAASQRDRNLERAVVDYVEAFVLAPHVGETFHAVITDVDDDRGRVRVQLREPAVVARLPADGLELGAEVTVRLD 208
            +DWPD VGYAERVR LRPDTP+RAALLSQAARGLRGAGYVAF  HD+P++P HSAIASTYAHVTAP+RRLCDRFANE+V+AHCADR PP WAVEALEELPSLMGAA +RDR+LERAV+D+VEA VL PHVGE F AV+TD+D  R R RVQL +PAVVA LPA GL LG  VTVRLD
Sbjct:    2 VDWPDDVGYAERVRELRPDTPARAALLSQAARGLRGAGYVAFRDHDLPAEPTHSAIASTYAHVTAPLRRLCDRFANEVVIAHCADRPPPGWAVEALEELPSLMGAARERDRSLERAVIDFVEAMVLRPHVGERFDAVVTDLDTARDRGRVQLHDPAVVAHLPARGLTLGQRVTVRLD 178          
BLAST of mRNA_M-pyrifera_M_contig105107.1099.1 vs. uniprot
Match: A0A3M2GZ11_ACTSX (RNB domain-containing ribonuclease n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GZ11_ACTSX)

HSP 1 Score: 246 bits (627), Expect = 5.110e-76
Identity = 122/209 (58.37%), Postives = 154/209 (73.68%), Query Frame = 0
Query:    1 MIDAGVGLLRTLPVPEPRTIAQIRRTARALGIDWPDSVGYAERVRSLRPDTPSRAALLSQAARGLRGAGYVAFTGHDIPSDPLHSAIASTYAHVTAPIRRLCDRFANEIVVAHCADRTPPSWAVEALEELPSLMGAASQRDRNLERAVVDYVEAFVLAPHVGETFHAVITDVDDDRG--RVRVQLREPAVVARLPADGLELGAEVTVRL 207
            M+DAG+GLLRTLP P+ RT+A +RR+ARALGI+WPD+  YA R+R+LRPDTP+  ALL+QAAR LRGAGY        P   +HSAIASTYAHVTAP+RRLCDR+ NE+V+A CA R  P+WA   L+ELP +M  A   D  L+RAVVD +EA +L PHVGETF AV+ D ++ RG  R R+QLR+PAV+AR+    +  G E+ V L
Sbjct:  264 MLDAGIGLLRTLPPPDHRTVAALRRSARALGIEWPDTWSYARRIRTLRPDTPAAIALLAQAARALRGAGYTVIDDGVPPERLVHSAIASTYAHVTAPLRRLCDRYTNEVVLAVCAGREAPTWATGMLDELPRIMARARHLDGQLDRAVVDLMEALLLEPHVGETFRAVVVDTEERRGHHRARIQLRDPAVIARMDDGRVRPGTEIGVAL 472          
BLAST of mRNA_M-pyrifera_M_contig105107.1099.1 vs. uniprot
Match: A0A520XYZ2_9ACTN (RNB domain-containing ribonuclease n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XYZ2_9ACTN)

HSP 1 Score: 244 bits (622), Expect = 1.770e-75
Identity = 129/210 (61.43%), Postives = 157/210 (74.76%), Query Frame = 0
Query:    1 MIDAGVGLLRTLPVPEPRTIAQIRRTARALGIDWPDSVGYAERVRSLRPDTPSRAALLSQAARGLRGAGYVAFTGHDIPSDPLHSAIASTYAHVTAPIRRLCDRFANEIVVAHCADRTPPSWAVEALEELPSLMGAASQRDRNLERAVVDYVEAFVLAPHVGETFHAVITDVDDDRGRVRVQLREPAVVARLPADGL-ELGAEVTVRLDE 209
            MID G+GLLRTLP P+ RT+ ++RRTARAL IDWP S  YA+ VR L P+ P  +AL++Q+ARGLRGAGY AF G ++P    HSAIAS YAHVTAP+RRL DRFANE V+A CA  TPP W VE L ELP L+G A  R+ +LER+VVD VEA VL   VGE+F  +ITDVD+DR R ++QL +PAVVA +  DG+ ELG  VTV+L E
Sbjct:  261 MIDGGIGLLRTLPRPDERTVRELRRTARALDIDWPASAAYADVVRRLDPNDPRESALIAQSARGLRGAGYEAFNG-ELPEHTEHSAIASDYAHVTAPLRRLGDRFANECVLAQCAGSTPPDWVVETLPELPKLLGRARNREGSLERSVVDLVEAAVLQSRVGESFEGIITDVDEDRSRSKIQLVDPAVVAYV--DGVAELGDVVTVQLTE 467          
BLAST of mRNA_M-pyrifera_M_contig105107.1099.1 vs. uniprot
Match: A0A7Y2D9U4_9ACTN (RNB domain-containing ribonuclease (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2D9U4_9ACTN)

HSP 1 Score: 209 bits (531), Expect = 2.090e-62
Identity = 107/169 (63.31%), Postives = 128/169 (75.74%), Query Frame = 0
Query:    1 MIDAGVGLLRTLPVPEPRTIAQIRRTARALGIDWPDSVGYAERVRSLRPDTPSRAALLSQAARGLRGAGYVAFTGHDIPSDPLHSAIASTYAHVTAPIRRLCDRFANEIVVAHCADRTPPSWAVEALEELPSLMGAASQRDRNLERAVVDYVEAFVLAPHVGETFHAVI 169
            M+ A VGLLRTLP P  RT+ +IRR+A ALGI+WP ++ YAERVR L P+ P  AALL+QAARGLRGAGYV F G ++P    H+AIA+ YAHVTAP+RR+CDRFANEIV+   ADR PP WAV AL+ELPS+MG A  RDR+LERAVVD  EA  LA  +G  F  V+
Sbjct:  262 MVGAKVGLLRTLPEPYDRTVKRIRRSALALGIEWPKAMPYAERVRDLDPNDPKHAALLNQAARGLRGAGYVGFVG-ELPEYTRHAAIAADYAHVTAPLRRVCDRFANEIVLNISADREPPEWAVSALDELPSVMGKARSRDRSLERAVVDLAEAVSLAHRIGHYFPGVV 429          
BLAST of mRNA_M-pyrifera_M_contig105107.1099.1 vs. uniprot
Match: H0E4L9_9ACTN (3'-to-5' exoribonuclease RNase R n=1 Tax=Patulibacter medicamentivorans TaxID=1097667 RepID=H0E4L9_9ACTN)

HSP 1 Score: 208 bits (529), Expect = 1.360e-61
Identity = 114/209 (54.55%), Postives = 137/209 (65.55%), Query Frame = 0
Query:    1 MIDAGVGLLRTLPVPEPRTIAQIRRTARALGIDWPDSVGYAERVRSLRPDTPSRAALLSQAARGLRGAGYVAFTGHDIPSDPLHSAIASTYAHVTAPIRRLCDRFANEIVVAHCADRTPPSWAVEALEELPSLMGAASQRDRNLERAVVDYVEAFVLAPHVGETFHAVITDVDDDRGRVRVQLREPAVVARLPADGLELGAEVTVRLDE 209
            M+  G GLLRTLP PEP  + ++RR+A ALG+DWP    Y E VR+L P T    ALL+Q AR LRGAGY AF G   P+DP H+AIA+ YAHVTAPIRRLCDR ANE ++AH A R  P W   AL      M AA +R   LER  +D VEA +LA  VGE F  V+ DVDD RG + VQLR+PA+  R   DGL LG+E+ V + E
Sbjct:  263 MLAGGSGLLRTLPAPEPAALERLRRSAAALGVDWPSGRSYPEFVRALDPATAVGGALLTQCARTLRGAGYTAFDGTP-PADPGHAAIAAPYAHVTAPIRRLCDRVANEALLAHAAGRPVPGWVGAALAPASEAMAAAGRRAGALERGAIDLVEALLLADRVGERFTGVVVDVDD-RGAL-VQLRDPAIQGRTTGDGLTLGSEIQVTVRE 468          
BLAST of mRNA_M-pyrifera_M_contig105107.1099.1 vs. uniprot
Match: UPI001C3E316D (RNB domain-containing ribonuclease n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3E316D)

HSP 1 Score: 207 bits (527), Expect = 1.440e-61
Identity = 110/207 (53.14%), Postives = 136/207 (65.70%), Query Frame = 0
Query:    1 MIDAGVGLLRTLPVPEPRTIAQIRRTARALGIDWPDSVGYAERVRSLRPDTPSRAALLSQAARGLRGAGYVAFTGHDIPSDPLHSAIASTYAHVTAPIRRLCDRFANEIVVAHCADRTPPSWAVEALEELPSLMGAASQRDRNLERAVVDYVEAFVLAPHVGETFHAVITDVDDDRGRVRVQLREPAVVARLPADGLELGAEVTVRL 207
            MID GVGL RTL   EPR +A +RR+ARALG+ W +   Y + VR+L P  P  AA   +AAR   GA Y  +   D    P+H+AIA+ YAHVTAP+RRL DRFANEIV+A C  R PP+WAV  L+E+ + M A  QR+R  ERA +D VEA VLAP VGE+F AV+TDV DDR  V VQ+ +PAVVA L       G  ++ RL
Sbjct:  232 MIDGGVGLFRTLAPAEPRDLASLRRSARALGVPWAEGARYGDVVRALDPADPHHAAFAVRAARLFGGAAYTPWRREDGTEPPVHAAIAAVYAHVTAPLRRLADRFANEIVLAFCEGREPPAWAVAPLDEIAATMAATGQRERQAERAAIDLVEAAVLAPRVGESFPAVVTDVRDDR--VTVQVADPAVVAPLEDGAATPGERISARL 436          
BLAST of mRNA_M-pyrifera_M_contig105107.1099.1 vs. uniprot
Match: A0A7W3QQA3_ACTNM (Exoribonuclease R n=2 Tax=Actinomadura TaxID=1988 RepID=A0A7W3QQA3_ACTNM)

HSP 1 Score: 207 bits (527), Expect = 2.100e-61
Identity = 112/209 (53.59%), Postives = 138/209 (66.03%), Query Frame = 0
Query:    1 MIDAGVGLLRTLPVPEPRTIAQIRRTARALGIDWPDSVGYAERVRSLRPDTPSRAALLSQAARGLRGAGYVAFTGHDIPSDPLHSAIASTYAHVTAPIRRLCDRFANEIVVAHCADRTPPSWAVEALEELPSLMGAASQRDRNLERAVVDYVEAFVLAPHVGETFHAVITDVDDDRGRVRVQLREPAVVARLPADGLELGAEVTVRLDE 209
            M++ GVGLLRT+P P P  + ++RRTA ALGI WP+   Y + VRSL P  P+ AA L ++   LRGAGYVAF G   P    HSA+A+ YAHVTAP+RRL DR+A E+ +A  A R  P WA EAL  LP  M  A QR   +ERA VD VEA +L  HVGE+F AV+ D D +RG  +VQL +PAVVAR+  +   LGA V VRL E
Sbjct:  248 MLEGGVGLLRTMPPPRPEALERVRRTAVALGIGWPEGRSYGDVVRSLEPARPAHAAFLYESVALLRGAGYVAFDGAP-PEQAAHSAVAAPYAHVTAPLRRLADRYAAEVCLALAAGRPVPGWAREALPGLPDTMRRALQRSGGVERACVDLVEALLLRDHVGESFDAVVVDTDPERGGGQVQLVDPAVVARVEGERPPLGAPVRVRLLE 455          
BLAST of mRNA_M-pyrifera_M_contig105107.1099.1 vs. uniprot
Match: UPI001966D1CB (RNB domain-containing ribonuclease n=1 Tax=Nocardioides sp. SYSU D00038 TaxID=2812554 RepID=UPI001966D1CB)

HSP 1 Score: 205 bits (522), Expect = 1.560e-60
Identity = 113/209 (54.07%), Postives = 144/209 (68.90%), Query Frame = 0
Query:    1 MIDAGVGLLRTLPVPEPRTIAQIRRTARALGIDWPDSVGYAERVRSLRPDTPSRAALLSQAARGLRGAGYVAFTGHDIPSDPLHSAIASTYAHVTAPIRRLCDRFANEIVVAHCADRTPPSWAVEALEELPSLMGAASQRDRNLERAVVDYVEAFVLAPHVGETFHAVITDVDDDRG-RVRVQLREPAVVARLP-ADGLELGAEVTVRL 207
            M+ A VGLLRTLP P+PR + ++ RTA+ALGI WP    Y + VRSL P  P+ AA++    R LRG+GY AF G ++P+DP H+A+A+ YAHVTAP+RRL DRFA+E+ +A CA    P W  EAL  LP L+  + +R R  E AVVD VEA +LAPHVGETF  V+T+VDD  G R  V ++EPAV AR+  A+ L LG EV V L
Sbjct:  260 MVYARVGLLRTLPPPDPRDVTRLHRTAQALGIAWPAEQLYPDFVRSLNPAKPTHAAMVVACTRLLRGSGYAAFDG-ELPADPQHAALATEYAHVTAPLRRLGDRFASEVCLALCAGTEVPGWVREALPTLPGLLQDSGRRARQYENAVVDLVEAGLLAPHVGETFTGVVTEVDDREGTRGTVTVQEPAVEARVTGAERLPLGEEVRVEL 467          
BLAST of mRNA_M-pyrifera_M_contig105107.1099.1 vs. uniprot
Match: UPI001669B7B1 (RNB domain-containing ribonuclease n=1 Tax=Nocardioides phosphati TaxID=1867775 RepID=UPI001669B7B1)

HSP 1 Score: 203 bits (516), Expect = 1.210e-59
Identity = 112/211 (53.08%), Postives = 140/211 (66.35%), Query Frame = 0
Query:    1 MIDAGVGLLRTLPVPEPRTIAQIRRTARALGIDWPDSVGYAERVRSLRPDTPSRAALLSQAARGLRGAGYVAFTGHDIPSDPLHSAIASTYAHVTAPIRRLCDRFANEIVVAHCADRTPPSWAVEALEELPSLMGAASQRDRNLERAVVDYVEAFVLAPHVGETFHAVITDVDDDRG-RVRVQLREPAVVARLPADG-LELGAEVTVRLDE 209
            M+D GVG+LRTLP P+PR +A++RRTA+AL +DWP+ + Y   VR+L P  P  AA+ +   R LRGAGYV F G   P    HSAIA+ YAHVTAP+RRL DR+A E  VA CA +  P W +E LE +P  M  + +R    ER VVD VEA VLAPHVGE+F AV+ D+D+ +  R RV L EPAV A +     L LG EV+VRL E
Sbjct:  261 MLDGGVGILRTLPDPDPRDVARLRRTAQALKVDWPEGLDYPAFVRTLDPTKPVHAAMANACTRLLRGAGYVGFNGTK-PEQTRHSAIAAEYAHVTAPLRRLVDRYALECCVALCAGQPVPEWVIEKLEVVPETMRESGRRASAYERGVVDLVEAGVLAPHVGESFSAVVVDIDEKQPTRGRVTLAEPAVEADVTGTASLPLGQEVSVRLTE 470          
BLAST of mRNA_M-pyrifera_M_contig105107.1099.1 vs. uniprot
Match: A0A2L0N7V7_9ACTN (Ribonuclease II n=2 Tax=Streptomycetaceae TaxID=2062 RepID=A0A2L0N7V7_9ACTN)

HSP 1 Score: 202 bits (515), Expect = 1.990e-59
Identity = 117/219 (53.42%), Postives = 139/219 (63.47%), Query Frame = 0
Query:    1 MIDAGVGLLRTLPVPEPRTIAQIRRTARALGIDWPDSVGYAERVRSLRPDTPSRAALLSQAARGLRGAGYVAFT---GHDIPSDPLHSAIASTYAHVTAPIRRLCDRFANEIVVAHCADRTPPSWAVEALEELPSLMGAASQRDRNLERAVVDYVEAFVLAPHVGETFHAVITDVDDDR-GRVRVQLREPAVVARL--PAD------GLELGAEVTVRL 207
            M+DAGVGLLRTLP   P    ++RRTARAL +DWPD + Y E VRSL PD P  AA L++    LRGAGY AF    G  +P+DP H+A+A+ YAH TAP+RRL DRFA E+  A  A  + P WA EAL  +PSLM    +R   +ERA VD VEA +LA   GE F A++ DVD+ R  R  VQLREPAV AR   P D      GL LG EV  RL
Sbjct:  256 MLDAGVGLLRTLPAAPPEAYQRLRRTARALDVDWPDGLPYPELVRSLDPDVPLNAAFLNECTGLLRGAGYHAFDTAQGLPVPADPAHAALAAPYAHCTAPLRRLGDRFAQEVCAAVAAGESVPDWAREALPAVPSLMAGGDRRSAEVERACVDLVEAELLAGREGEDFPALVIDVDEQRPARGTVQLREPAVRARCERPDDASGAGRGLPLGGEVLARL 474          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105107.1099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X5WTK5_9ACTN3.690e-9779.10RNB domain-containing ribonuclease n=1 Tax=Actinom... [more]
A0A3M2GZ11_ACTSX5.110e-7658.37RNB domain-containing ribonuclease n=1 Tax=Actinom... [more]
A0A520XYZ2_9ACTN1.770e-7561.43RNB domain-containing ribonuclease n=1 Tax=Acidimi... [more]
A0A7Y2D9U4_9ACTN2.090e-6263.31RNB domain-containing ribonuclease (Fragment) n=1 ... [more]
H0E4L9_9ACTN1.360e-6154.553'-to-5' exoribonuclease RNase R n=1 Tax=Patulibac... [more]
UPI001C3E316D1.440e-6153.14RNB domain-containing ribonuclease n=1 Tax=Miltonc... [more]
A0A7W3QQA3_ACTNM2.100e-6153.59Exoribonuclease R n=2 Tax=Actinomadura TaxID=1988 ... [more]
UPI001966D1CB1.560e-6054.07RNB domain-containing ribonuclease n=1 Tax=Nocardi... [more]
UPI001669B7B11.210e-5953.08RNB domain-containing ribonuclease n=1 Tax=Nocardi... [more]
A0A2L0N7V7_9ACTN1.990e-5953.42Ribonuclease II n=2 Tax=Streptomycetaceae TaxID=20... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040596RNase II-type exonuclease, C-terminal S1 domainPFAMPF18614RNase_II_C_S1coord: 163..209
e-value: 3.3E-13
score: 49.4
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 7..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105107contigM-pyrifera_M_contig105107:2..628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105107.1099.1mRNA_M-pyrifera_M_contig105107.1099.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig105107 2..637 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig105107.1099.1 ID=prot_M-pyrifera_M_contig105107.1099.1|Name=mRNA_M-pyrifera_M_contig105107.1099.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp
MIDAGVGLLRTLPVPEPRTIAQIRRTARALGIDWPDSVGYAERVRSLRPD
TPSRAALLSQAARGLRGAGYVAFTGHDIPSDPLHSAIASTYAHVTAPIRR
LCDRFANEIVVAHCADRTPPSWAVEALEELPSLMGAASQRDRNLERAVVD
YVEAFVLAPHVGETFHAVITDVDDDRGRVRVQLREPAVVARLPADGLELG
AEVTVRLDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040596RNase_II_C_S1
IPR012340NA-bd_OB-fold